RNA–Protein interactions for RNA: ENST00000543491.2

PCDH7-206, Transcript of protocadherin 7, humanhuman

APPRIS ALT2 BASIC

Gene PCDH7, Length 4,457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-206ENST00000543491 CLIP2Q9UDT6 1046 aa20.56■□□□□ 0.88
PCDH7-206ENST00000543491 PTPRTO14522 1441 aa20.55■□□□□ 0.88
PCDH7-206ENST00000543491 SDSP20132 328 aa20.55■□□□□ 0.88
PCDH7-206ENST00000543491 SAFBQ15424 915 aaKnown RBP eCLIP20.55■□□□□ 0.88
PCDH7-206ENST00000543491 SERPINC1P01008 464 aa20.55■□□□□ 0.88
PCDH7-206ENST00000543491 CABP4P57796 275 aa20.55■□□□□ 0.88
PCDH7-206ENST00000543491 CAVIN2O95810 425 aa20.55■□□□□ 0.88
PCDH7-206ENST00000543491 EIF3JO75822 258 aaKnown RBP20.54■□□□□ 0.88
PCDH7-206ENST00000543491 ZNF830Q96NB3 372 aaPredicted RBP20.54■□□□□ 0.88
PCDH7-206ENST00000543491 RBSNQ9H1K0 784 aa20.54■□□□□ 0.88
PCDH7-206ENST00000543491 TTC12Q9H892 705 aaPredicted RBP20.54■□□□□ 0.88
PCDH7-206ENST00000543491 STK3Q13188 491 aa20.54■□□□□ 0.88
PCDH7-206ENST00000543491 RUFY1Q96T51 708 aa20.54■□□□□ 0.88
PCDH7-206ENST00000543491 DHX16O60231 1041 aaKnown RBP20.54■□□□□ 0.88
PCDH7-206ENST00000543491 ERLIN1O75477 346 aa20.54■□□□□ 0.88
PCDH7-206ENST00000543491 KCNA6P17658 529 aa20.54■□□□□ 0.88
PCDH7-206ENST00000543491 ANAPC15P60006 121 aa20.54■□□□□ 0.88
PCDH7-206ENST00000543491 SFPQP23246 707 aaKnown RBP eCLIP20.53■□□□□ 0.88
PCDH7-206ENST00000543491 CBFA2T2O43439 604 aa20.53■□□□□ 0.88
PCDH7-206ENST00000543491 KRT32Q14532 448 aa20.53■□□□□ 0.88
PCDH7-206ENST00000543491 PPP1R9BQ96SB3 815 aa20.53■□□□□ 0.88
PCDH7-206ENST00000543491 NUTM1Q86Y26 1132 aa20.53■□□□□ 0.88
PCDH7-206ENST00000543491 JMYQ8N9B5 988 aa20.53■□□□□ 0.88
PCDH7-206ENST00000543491 GLRX3O76003 335 aaKnown RBP20.52■□□□□ 0.88
PCDH7-206ENST00000543491 KIF1BPQ96EK5 621 aa20.52■□□□□ 0.88
PCDH7-206ENST00000543491 KRT222Q8N1A0 295 aa20.52■□□□□ 0.87
PCDH7-206ENST00000543491 ANO10Q9NW15 660 aa20.52■□□□□ 0.87
PCDH7-206ENST00000543491 RAB11FIP3O75154 756 aa20.51■□□□□ 0.87
PCDH7-206ENST00000543491 FLIIQ13045 1269 aa20.51■□□□□ 0.87
PCDH7-206ENST00000543491 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
PCDH7-206ENST00000543491 KDM5CP41229 1560 aa20.51■□□□□ 0.87
PCDH7-206ENST00000543491 PTPRCP08575 1304 aa20.51■□□□□ 0.87
PCDH7-206ENST00000543491 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
PCDH7-206ENST00000543491 CDC42BPAQ5VT25 1732 aa20.51■□□□□ 0.87
PCDH7-206ENST00000543491 DNAJC2Q99543 621 aaKnown RBP20.51■□□□□ 0.87
PCDH7-206ENST00000543491 SPG7Q9UQ90 795 aa20.51■□□□□ 0.87
PCDH7-206ENST00000543491 ABCC1P33527 1531 aa20.5■□□□□ 0.87
PCDH7-206ENST00000543491 CTAGE5O15320 804 aa20.5■□□□□ 0.87
PCDH7-206ENST00000543491 TULP1O00294 542 aaPredicted RBP20.5■□□□□ 0.87
PCDH7-206ENST00000543491 APPP05067 770 aa20.5■□□□□ 0.87
PCDH7-206ENST00000543491 ZNF165P49910 485 aa20.5■□□□□ 0.87
PCDH7-206ENST00000543491 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
PCDH7-206ENST00000543491 KIF20AO95235 890 aa20.5■□□□□ 0.87
PCDH7-206ENST00000543491 CKAP2LQ8IYA6 745 aa20.5■□□□□ 0.87
PCDH7-206ENST00000543491 SMTNL1A8MU46 457 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 USP48Q86UV5 1035 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 FEZ1Q99689 392 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 ZSCAN22P10073 491 aaPredicted RBP20.49■□□□□ 0.87
PCDH7-206ENST00000543491 TSHZ3Q63HK5 1081 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 LRRFIP2Q9Y608 721 aaKnown RBP20.49■□□□□ 0.87
PCDH7-206ENST00000543491 VAMP4O75379 141 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 BMS1Q14692 1282 aaKnown RBP20.49■□□□□ 0.87
PCDH7-206ENST00000543491 CHRNA2Q15822 529 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 GIMAP6Q6P9H5 292 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 ANKRD44Q8N8A2 993 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 MEIS3Q99687 375 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 ANTXR1Q9H6X2 564 aa20.49■□□□□ 0.87
PCDH7-206ENST00000543491 FAM200AQ8TCP9 573 aa20.48■□□□□ 0.87
PCDH7-206ENST00000543491 INTS4Q96HW7 963 aaKnown RBP20.48■□□□□ 0.87
PCDH7-206ENST00000543491 TIGD1Q96MW7 591 aa20.48■□□□□ 0.87
PCDH7-206ENST00000543491 GSDMDP57764 484 aa20.48■□□□□ 0.87
PCDH7-206ENST00000543491 H0YHG0 523 aa20.48■□□□□ 0.87
PCDH7-206ENST00000543491 MTHFSDQ2M296 383 aaKnown RBP20.48■□□□□ 0.87
PCDH7-206ENST00000543491 FILIP1LQ4L180 1135 aa20.48■□□□□ 0.87
PCDH7-206ENST00000543491 ZGPATQ8N5A5 531 aaKnown RBP20.48■□□□□ 0.87
PCDH7-206ENST00000543491 NFXL1Q6ZNB6 911 aa20.47■□□□□ 0.87
PCDH7-206ENST00000543491 SMARCE1Q969G3 411 aa20.47■□□□□ 0.87
PCDH7-206ENST00000543491 ZNF500O60304 480 aaPredicted RBP20.47■□□□□ 0.87
PCDH7-206ENST00000543491 MYRIPQ8NFW9 859 aa20.47■□□□□ 0.87
PCDH7-206ENST00000543491 CCDC85AQ96PX6 553 aaPredicted RBP20.47■□□□□ 0.87
PCDH7-206ENST00000543491 TRIM35Q9UPQ4 493 aa20.47■□□□□ 0.87
PCDH7-206ENST00000543491 CEP135Q66GS9 1140 aa20.47■□□□□ 0.87
PCDH7-206ENST00000543491 PRPF40BQ6NWY9 871 aaKnown RBP20.47■□□□□ 0.87
PCDH7-206ENST00000543491 FAM177A1Q8N128 213 aaPredicted RBP20.47■□□□□ 0.87
PCDH7-206ENST00000543491 MAP3K19Q56UN5 1328 aa20.46■□□□□ 0.87
PCDH7-206ENST00000543491 CCDC171Q6TFL3 1326 aa20.46■□□□□ 0.87
PCDH7-206ENST00000543491 ZCCHC11Q5TAX3 1644 aaKnown RBP20.46■□□□□ 0.87
PCDH7-206ENST00000543491 DCTPP1Q9H773 170 aa20.46■□□□□ 0.87
PCDH7-206ENST00000543491 LRRC59Q96AG4 307 aaKnown RBP20.46■□□□□ 0.87
PCDH7-206ENST00000543491 PCMTD1Q96MG8 357 aaPredicted RBP20.46■□□□□ 0.87
PCDH7-206ENST00000543491 WASHC4Q2M389 1173 aa20.45■□□□□ 0.86
PCDH7-206ENST00000543491 CCDC47Q96A33 483 aaKnown RBP20.45■□□□□ 0.86
PCDH7-206ENST00000543491 USP26Q9BXU7 913 aa20.45■□□□□ 0.86
PCDH7-206ENST00000543491 AACSQ86V21 672 aa20.45■□□□□ 0.86
PCDH7-206ENST00000543491 MRPL50Q8N5N7 158 aaKnown RBP20.45■□□□□ 0.86
PCDH7-206ENST00000543491 EYA1Q99502 592 aa20.45■□□□□ 0.86
PCDH7-206ENST00000543491 CCDC186Q7Z3E2 898 aa20.45■□□□□ 0.86
PCDH7-206ENST00000543491 LRRIQ1Q96JM4 1722 aa20.44■□□□□ 0.86
PCDH7-206ENST00000543491 GJB2P29033 226 aa20.44■□□□□ 0.86
PCDH7-206ENST00000543491 TRMT1Q9NXH9 659 aaKnown RBP20.44■□□□□ 0.86
PCDH7-206ENST00000543491 ZSCAN12O43309 604 aa20.44■□□□□ 0.86
PCDH7-206ENST00000543491 PDE1AP54750 535 aa20.44■□□□□ 0.86
PCDH7-206ENST00000543491 LTKP29376 864 aa20.44■□□□□ 0.86
PCDH7-206ENST00000543491 PIBF1Q8WXW3 757 aa20.44■□□□□ 0.86
PCDH7-206ENST00000543491 ESYT1Q9BSJ8 1104 aa20.44■□□□□ 0.86
PCDH7-206ENST00000543491 NOL10Q9BSC4 688 aaKnown RBP20.43■□□□□ 0.86
PCDH7-206ENST00000543491 PI4KAP2A4QPH2 592 aa20.43■□□□□ 0.86
PCDH7-206ENST00000543491 PLEKHM2Q8IWE5 1019 aa20.43■□□□□ 0.86
PCDH7-206ENST00000543491 PI4KAP1Q8N8J0 262 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms