RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 N4BP2Q86UW6 1770 aaPredicted RBP24.75■■□□□ 1.55
TMED3-204ENST00000543455 BTBD11A6QL63 1104 aa24.75■■□□□ 1.55
TMED3-204ENST00000543455 HTATSF1O43719 755 aaKnown RBP24.75■■□□□ 1.55
TMED3-204ENST00000543455 PXDNLA1KZ92 1463 aa24.74■■□□□ 1.55
TMED3-204ENST00000543455 DDR1Q08345 913 aa24.74■■□□□ 1.55
TMED3-204ENST00000543455 RTF1Q92541 710 aaKnown RBP24.74■■□□□ 1.55
TMED3-204ENST00000543455 MYBBP1AQ9BQG0 1328 aaKnown RBP24.74■■□□□ 1.55
TMED3-204ENST00000543455 USPL1Q5W0Q7 1092 aa24.73■■□□□ 1.55
TMED3-204ENST00000543455 FMNL2Q96PY5 1086 aa24.72■■□□□ 1.55
TMED3-204ENST00000543455 BCL2L12Q9HB09 334 aa24.72■■□□□ 1.55
TMED3-204ENST00000543455 CANXP27824 592 aaKnown RBP24.71■■□□□ 1.55
TMED3-204ENST00000543455 EIF5P55010 431 aaKnown RBP24.71■■□□□ 1.55
TMED3-204ENST00000543455 PRAMEF22A3QJZ6 481 aa24.7■■□□□ 1.55
TMED3-204ENST00000543455 STARD3NLO95772 234 aa24.7■■□□□ 1.55
TMED3-204ENST00000543455 TM4SF1P30408 202 aa24.7■■□□□ 1.55
TMED3-204ENST00000543455 NARFQ9UHQ1 456 aa24.7■■□□□ 1.55
TMED3-204ENST00000543455 WWC3Q9ULE0 1092 aa24.7■■□□□ 1.55
TMED3-204ENST00000543455 KDM3BQ7LBC6 1761 aa24.7■■□□□ 1.54
TMED3-204ENST00000543455 BRCA1P38398 1863 aaKnown RBP24.7■■□□□ 1.54
TMED3-204ENST00000543455 NFE2L2Q16236 605 aa24.7■■□□□ 1.54
TMED3-204ENST00000543455 PARP3Q9Y6F1 533 aa24.7■■□□□ 1.54
TMED3-204ENST00000543455 AFDNP55196 1824 aaKnown RBP24.69■■□□□ 1.54
TMED3-204ENST00000543455 TEX13AQ9BXU3 409 aaPredicted RBP24.69■■□□□ 1.54
TMED3-204ENST00000543455 SCN7AQ01118 1682 aa24.68■■□□□ 1.54
TMED3-204ENST00000543455 POLRMTO00411 1230 aaKnown RBP24.68■■□□□ 1.54
TMED3-204ENST00000543455 ZPR1O75312 459 aa24.68■■□□□ 1.54
TMED3-204ENST00000543455 A1BGP04217 495 aa24.68■■□□□ 1.54
TMED3-204ENST00000543455 USP16Q9Y5T5 823 aa24.68■■□□□ 1.54
TMED3-204ENST00000543455 NRXN2Q9P2S2 1712 aa24.67■■□□□ 1.54
TMED3-204ENST00000543455 GRIN3BO60391 1043 aa24.67■■□□□ 1.54
TMED3-204ENST00000543455 THUMPD2Q9BTF0 503 aaKnown RBP24.67■■□□□ 1.54
TMED3-204ENST00000543455 ZNF784Q8NCA9 323 aaPredicted RBP24.66■■□□□ 1.54
TMED3-204ENST00000543455 MIS18AQ9NYP9 233 aa24.66■■□□□ 1.54
TMED3-204ENST00000543455 TGFB2P61812 414 aa24.65■■□□□ 1.54
TMED3-204ENST00000543455 NFIXQ14938 502 aa24.65■■□□□ 1.54
TMED3-204ENST00000543455 TAF7Q15545 349 aaPredicted RBP24.65■■□□□ 1.54
TMED3-204ENST00000543455 PRKRIP1Q9H875 184 aaPredicted RBP24.65■■□□□ 1.54
TMED3-204ENST00000543455 A0A0G2JLW4 131 aa24.64■■□□□ 1.54
TMED3-204ENST00000543455 NEFMP07197 916 aa24.64■■□□□ 1.54
TMED3-204ENST00000543455 IL6STP40189 918 aaPredicted RBP24.64■■□□□ 1.53
TMED3-204ENST00000543455 BCORQ6W2J9 1755 aa24.63■■□□□ 1.53
TMED3-204ENST00000543455 MAPK8IP3Q9UPT6 1336 aa24.63■■□□□ 1.53
TMED3-204ENST00000543455 DPEP1P16444 411 aa24.63■■□□□ 1.53
TMED3-204ENST00000543455 KCNA3P22001 575 aa24.63■■□□□ 1.53
TMED3-204ENST00000543455 PIP4K2AP48426 406 aaPredicted RBP24.63■■□□□ 1.53
TMED3-204ENST00000543455 LAMB4A4D0S4 1761 aa24.62■■□□□ 1.53
TMED3-204ENST00000543455 SNRPA1P09661 255 aaKnown RBP24.62■■□□□ 1.53
TMED3-204ENST00000543455 PNNQ9H307 717 aaKnown RBP24.62■■□□□ 1.53
TMED3-204ENST00000543455 A0A087WZG4 1122 aa24.6■■□□□ 1.53
TMED3-204ENST00000543455 TBC1D2BQ9UPU7 963 aa24.6■■□□□ 1.53
TMED3-204ENST00000543455 ZNF330Q9Y3S2 320 aaPredicted RBP24.59■■□□□ 1.53
TMED3-204ENST00000543455 NBPF26B4DH59 902 aa24.58■■□□□ 1.53
TMED3-204ENST00000543455 CAMTA2O94983 1202 aa24.58■■□□□ 1.53
TMED3-204ENST00000543455 NBPF10Q6P3W6 841 aaKnown RBP24.58■■□□□ 1.53
TMED3-204ENST00000543455 NBPF15Q8N660 670 aa24.58■■□□□ 1.53
TMED3-204ENST00000543455 TMPOP42166 694 aaKnown RBP24.58■■□□□ 1.52
TMED3-204ENST00000543455 CCDC146Q8IYE0 955 aa24.58■■□□□ 1.52
TMED3-204ENST00000543455 ARFGEF1Q9Y6D6 1849 aa24.57■■□□□ 1.52
TMED3-204ENST00000543455 RIPK4P57078 832 aa24.57■■□□□ 1.52
TMED3-204ENST00000543455 TBC1D9BQ66K14 1250 aa24.57■■□□□ 1.52
TMED3-204ENST00000543455 CARMIL3Q8ND23 1372 aa24.56■■□□□ 1.52
TMED3-204ENST00000543455 ANKRD31Q8N7Z5 1873 aa24.56■■□□□ 1.52
TMED3-204ENST00000543455 SERPINB2P05120 415 aa24.56■■□□□ 1.52
TMED3-204ENST00000543455 EIF4A1P60842 406 aaKnown RBP24.56■■□□□ 1.52
TMED3-204ENST00000543455 PNISRQ8TF01 805 aaKnown RBP24.56■■□□□ 1.52
TMED3-204ENST00000543455 CHRNA5P30532 468 aa24.55■■□□□ 1.52
TMED3-204ENST00000543455 BICDL1Q6ZP65 573 aa24.55■■□□□ 1.52
TMED3-204ENST00000543455 ADAMTS8Q9UP79 889 aa24.55■■□□□ 1.52
TMED3-204ENST00000543455 RRP7AQ9Y3A4 280 aaKnown RBP24.55■■□□□ 1.52
TMED3-204ENST00000543455 DLEC1Q9Y238 1755 aa24.54■■□□□ 1.52
TMED3-204ENST00000543455 ADCY9O60503 1353 aa24.54■■□□□ 1.52
TMED3-204ENST00000543455 GIGYF1O75420 1035 aaPredicted RBP24.54■■□□□ 1.52
TMED3-204ENST00000543455 BCS1LQ9Y276 419 aa24.54■■□□□ 1.52
TMED3-204ENST00000543455 DZIP3Q86Y13 1208 aaKnown RBP24.53■■□□□ 1.52
TMED3-204ENST00000543455 WDR43Q15061 677 aaKnown RBP eCLIP24.51■■□□□ 1.51
TMED3-204ENST00000543455 RUNDC1Q96C34 613 aa24.51■■□□□ 1.51
TMED3-204ENST00000543455 TRIM35Q9UPQ4 493 aa24.51■■□□□ 1.51
TMED3-204ENST00000543455 PIM2Q9P1W9 311 aa24.5■■□□□ 1.51
TMED3-204ENST00000543455 ATP10DQ9P241 1426 aa24.49■■□□□ 1.51
TMED3-204ENST00000543455 COL11A2P13942 1736 aaPredicted RBP24.48■■□□□ 1.51
TMED3-204ENST00000543455 NEUROD2Q15784 382 aa24.48■■□□□ 1.51
TMED3-204ENST00000543455 PRR5LQ6MZQ0 368 aa24.48■■□□□ 1.51
TMED3-204ENST00000543455 TSPYL4Q9UJ04 414 aa24.48■■□□□ 1.51
TMED3-204ENST00000543455 CCDC184Q52MB2 194 aa24.47■■□□□ 1.51
TMED3-204ENST00000543455 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
TMED3-204ENST00000543455 LMOD3Q0VAK6 560 aa24.46■■□□□ 1.51
TMED3-204ENST00000543455 NPM2Q86SE8 214 aaKnown RBP24.46■■□□□ 1.51
TMED3-204ENST00000543455 CCDC24Q8N4L8 307 aa24.46■■□□□ 1.51
TMED3-204ENST00000543455 DALRD3Q5D0E6 543 aaKnown RBP24.45■■□□□ 1.51
TMED3-204ENST00000543455 CLEC4GQ6UXB4 293 aa24.45■■□□□ 1.5
TMED3-204ENST00000543455 BABAM1Q9NWV8 329 aa24.45■■□□□ 1.5
TMED3-204ENST00000543455 HLFQ16534 295 aa24.44■■□□□ 1.5
TMED3-204ENST00000543455 SETDB2Q96T68 719 aa24.44■■□□□ 1.5
TMED3-204ENST00000543455 NUP98P52948 1817 aa24.43■■□□□ 1.5
TMED3-204ENST00000543455 ARHGAP27Q6ZUM4 889 aa24.43■■□□□ 1.5
TMED3-204ENST00000543455 RGL2O15211 777 aa24.42■■□□□ 1.5
TMED3-204ENST00000543455 C2CD5Q86YS7 1000 aa24.42■■□□□ 1.5
TMED3-204ENST00000543455 SBF1O95248 1867 aa24.42■■□□□ 1.5
TMED3-204ENST00000543455 CHL1O00533 1208 aa24.41■■□□□ 1.5
TMED3-204ENST00000543455 LRP10Q7Z4F1 713 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms