RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 ERBB4Q15303 1308 aa9.16□□□□□ -0.94
CIT-213ENST00000543324 NPM3O75607 178 aaKnown RBP9.16□□□□□ -0.94
CIT-213ENST00000543324 SAGE1Q9NXZ1 904 aa9.16□□□□□ -0.94
CIT-213ENST00000543324 RBBP6Q7Z6E9 1792 aaKnown RBP9.16□□□□□ -0.94
CIT-213ENST00000543324 FER1L6Q2WGJ9 1857 aa9.15□□□□□ -0.94
CIT-213ENST00000543324 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
CIT-213ENST00000543324 SCN11AQ9UI33 1791 aa9.15□□□□□ -0.94
CIT-213ENST00000543324 FMR1Q06787 632 aaKnown RBP eCLIP9.15□□□□□ -0.94
CIT-213ENST00000543324 PKN2Q16513 984 aaKnown RBP9.15□□□□□ -0.94
CIT-213ENST00000543324 CST9Q5W186 159 aa9.15□□□□□ -0.94
CIT-213ENST00000543324 INSRP06213 1382 aa9.14□□□□□ -0.95
CIT-213ENST00000543324 GNPATO15228 680 aa9.14□□□□□ -0.95
CIT-213ENST00000543324 LINC00116Q8NCU8 138 aa9.14□□□□□ -0.95
CIT-213ENST00000543324 HHIPL1Q96JK4 782 aa9.14□□□□□ -0.95
CIT-213ENST00000543324 HTTP42858 3142 aa9.14□□□□□ -0.95
CIT-213ENST00000543324 TTC28Q96AY4 2481 aa9.13□□□□□ -0.95
CIT-213ENST00000543324 EPHX2P34913 555 aa9.13□□□□□ -0.95
CIT-213ENST00000543324 SAPCD2Q86UD0 394 aa9.13□□□□□ -0.95
CIT-213ENST00000543324 PNMA8AQ86V59 439 aaPredicted RBP9.13□□□□□ -0.95
CIT-213ENST00000543324 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.13□□□□□ -0.95
CIT-213ENST00000543324 KCNH5Q8NCM2 988 aa9.13□□□□□ -0.95
CIT-213ENST00000543324 RNF39Q9H2S5 420 aa9.13□□□□□ -0.95
CIT-213ENST00000543324 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
CIT-213ENST00000543324 HACL1Q9UJ83 578 aa9.13□□□□□ -0.95
CIT-213ENST00000543324 PAPPA2Q9BXP8 1791 aa9.13□□□□□ -0.95
CIT-213ENST00000543324 GYS1P13807 737 aa9.12□□□□□ -0.95
CIT-213ENST00000543324 AKAP4Q5JQC9 854 aa9.12□□□□□ -0.95
CIT-213ENST00000543324 CHRDL2Q6WN34 429 aa9.12□□□□□ -0.95
CIT-213ENST00000543324 ZIC5Q96T25 663 aa9.12□□□□□ -0.95
CIT-213ENST00000543324 CABP2Q9NPB3 220 aa9.12□□□□□ -0.95
CIT-213ENST00000543324 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
CIT-213ENST00000543324 CENPFP49454 3210 aa9.12□□□□□ -0.95
CIT-213ENST00000543324 EVC2Q86UK5 1308 aa9.11□□□□□ -0.95
CIT-213ENST00000543324 POTEFA5A3E0 1075 aa9.11□□□□□ -0.95
CIT-213ENST00000543324 NOGQ13253 232 aa9.11□□□□□ -0.95
CIT-213ENST00000543324 AKAP11Q9UKA4 1901 aa9.1□□□□□ -0.95
CIT-213ENST00000543324 H0YGN5 161 aa9.1□□□□□ -0.95
CIT-213ENST00000543324 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
CIT-213ENST00000543324 STXBP5LQ9Y2K9 1186 aa9.1□□□□□ -0.95
CIT-213ENST00000543324 KIAA0100Q14667 2235 aaKnown RBP9.09□□□□□ -0.95
CIT-213ENST00000543324 LTBP3Q9NS15 1303 aa9.09□□□□□ -0.95
CIT-213ENST00000543324 CCDC24Q8N4L8 307 aa9.09□□□□□ -0.95
CIT-213ENST00000543324 TTLL6Q8N841 843 aa9.09□□□□□ -0.95
CIT-213ENST00000543324 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
CIT-213ENST00000543324 KIF20BQ96Q89 1820 aa9.09□□□□□ -0.95
CIT-213ENST00000543324 PIEZO1Q92508 2521 aa9.09□□□□□ -0.95
CIT-213ENST00000543324 USP31Q70CQ4 1352 aa9.09□□□□□ -0.95
CIT-213ENST00000543324 ANKRD26Q9UPS8 1709 aa9.08□□□□□ -0.96
CIT-213ENST00000543324 ITGB4P16144 1822 aa9.08□□□□□ -0.96
CIT-213ENST00000543324 SOX12O15370 315 aa9.08□□□□□ -0.96
CIT-213ENST00000543324 DDR1Q08345 913 aa9.08□□□□□ -0.96
CIT-213ENST00000543324 NEUROD1Q13562 356 aa9.08□□□□□ -0.96
CIT-213ENST00000543324 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
CIT-213ENST00000543324 FBXO46Q6PJ61 603 aaPredicted RBP9.08□□□□□ -0.96
CIT-213ENST00000543324 SMARCC1Q92922 1105 aaPredicted RBP9.08□□□□□ -0.96
CIT-213ENST00000543324 RNF186Q9NXI6 227 aa9.08□□□□□ -0.96
CIT-213ENST00000543324 TONSLQ96HA7 1378 aa9.08□□□□□ -0.96
CIT-213ENST00000543324 TTC21AQ8NDW8 1320 aa9.07□□□□□ -0.96
CIT-213ENST00000543324 EDC4Q6P2E9 1401 aaKnown RBP9.07□□□□□ -0.96
CIT-213ENST00000543324 TRAF5O00463 557 aa9.07□□□□□ -0.96
CIT-213ENST00000543324 SOX1O00570 391 aaPredicted RBP9.07□□□□□ -0.96
CIT-213ENST00000543324 TRPA1O75762 1119 aa9.07□□□□□ -0.96
CIT-213ENST00000543324 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
CIT-213ENST00000543324 PUS7Q96PZ0 661 aaKnown RBP9.07□□□□□ -0.96
CIT-213ENST00000543324 TESK2Q96S53 571 aa9.07□□□□□ -0.96
CIT-213ENST00000543324 PRO3102Q9H379 93 aa9.07□□□□□ -0.96
CIT-213ENST00000543324 RGPD2P0DJD1 1756 aa9.07□□□□□ -0.96
CIT-213ENST00000543324 TTC21BQ7Z4L5 1316 aa9.06□□□□□ -0.96
CIT-213ENST00000543324 SYNGAP1Q96PV0 1343 aa9.06□□□□□ -0.96
CIT-213ENST00000543324 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
CIT-213ENST00000543324 SIK1P57059 783 aa9.06□□□□□ -0.96
CIT-213ENST00000543324 ITPK1Q13572 414 aa9.06□□□□□ -0.96
CIT-213ENST00000543324 ARHGEF1Q92888 912 aaKnown RBP9.06□□□□□ -0.96
CIT-213ENST00000543324 LAMA2P24043 3122 aaKnown RBP9.06□□□□□ -0.96
CIT-213ENST00000543324 RNF123Q5XPI4 1314 aa9.05□□□□□ -0.96
CIT-213ENST00000543324 A0A1W2PP64 1363 aa9.05□□□□□ -0.96
CIT-213ENST00000543324 KTN1Q86UP2 1357 aaKnown RBP9.05□□□□□ -0.96
CIT-213ENST00000543324 MPRIPQ6WCQ1 1025 aa9.05□□□□□ -0.96
CIT-213ENST00000543324 ZCRB1Q8TBF4 217 aaKnown RBP9.05□□□□□ -0.96
CIT-213ENST00000543324 LRCH3Q96II8 777 aa9.05□□□□□ -0.96
CIT-213ENST00000543324 ZNF692Q9BU19 519 aaPredicted RBP9.05□□□□□ -0.96
CIT-213ENST00000543324 CARD11Q9BXL7 1154 aa9.05□□□□□ -0.96
CIT-213ENST00000543324 RTCBQ9Y3I0 505 aaKnown RBP9.05□□□□□ -0.96
CIT-213ENST00000543324 SMG6Q86US8 1419 aaKnown RBP9.05□□□□□ -0.96
CIT-213ENST00000543324 ZNF541Q9H0D2 1346 aa9.05□□□□□ -0.96
CIT-213ENST00000543324 AFDNP55196 1824 aaKnown RBP9.04□□□□□ -0.96
CIT-213ENST00000543324 ANKRD13DQ6ZTN6 518 aa9.04□□□□□ -0.96
CIT-213ENST00000543324 TAOK3Q9H2K8 898 aa9.04□□□□□ -0.96
CIT-213ENST00000543324 NRXN2Q9P2S2 1712 aa9.04□□□□□ -0.96
CIT-213ENST00000543324 EYSQ5T1H1 3165 aa9.03□□□□□ -0.96
CIT-213ENST00000543324 POLRMTO00411 1230 aaKnown RBP9.03□□□□□ -0.96
CIT-213ENST00000543324 CELF2O95319 508 aaKnown RBP9.03□□□□□ -0.96
CIT-213ENST00000543324 KCNA4P22459 653 aa9.03□□□□□ -0.96
CIT-213ENST00000543324 RFC4P35249 363 aa9.03□□□□□ -0.96
CIT-213ENST00000543324 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
CIT-213ENST00000543324 FAM155AB1AL88 458 aaPredicted RBP9.02□□□□□ -0.97
CIT-213ENST00000543324 EN2P19622 333 aaPredicted RBP9.02□□□□□ -0.97
CIT-213ENST00000543324 C1QBPQ07021 282 aaKnown RBP9.02□□□□□ -0.97
CIT-213ENST00000543324 HDAC9Q9UKV0 1011 aa9.02□□□□□ -0.97
CIT-213ENST00000543324 CLSPNQ9HAW4 1339 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms