RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 PLEKHG5O94827 1062 aa15.68■□□□□ 0.1
PTCD2-212ENST00000543322 TAF7Q15545 349 aaPredicted RBP15.68■□□□□ 0.1
PTCD2-212ENST00000543322 NECTIN2Q92692 538 aa15.68■□□□□ 0.1
PTCD2-212ENST00000543322 IL25Q9H293 177 aa15.68■□□□□ 0.1
PTCD2-212ENST00000543322 TBX22Q9Y458 520 aa15.68■□□□□ 0.1
PTCD2-212ENST00000543322 RAD50Q92878 1312 aa15.67■□□□□ 0.1
PTCD2-212ENST00000543322 LTN1O94822 1766 aa15.67■□□□□ 0.1
PTCD2-212ENST00000543322 MCM5P33992 734 aa15.67■□□□□ 0.1
PTCD2-212ENST00000543322 PI4K2BQ8TCG2 481 aa15.67■□□□□ 0.1
PTCD2-212ENST00000543322 ZKSCAN5Q9Y2L8 839 aa15.67■□□□□ 0.1
PTCD2-212ENST00000543322 RPAP1Q9BWH6 1393 aaPredicted RBP15.66■□□□□ 0.1
PTCD2-212ENST00000543322 WDR33Q9C0J8 1336 aaKnown RBP15.66■□□□□ 0.1
PTCD2-212ENST00000543322 NOL8Q76FK4 1167 aaKnown RBP15.66■□□□□ 0.1
PTCD2-212ENST00000543322 SYAP1Q96A49 352 aaPredicted RBP15.66■□□□□ 0.1
PTCD2-212ENST00000543322 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
PTCD2-212ENST00000543322 EID1Q9Y6B2 187 aa15.66■□□□□ 0.1
PTCD2-212ENST00000543322 CEMIPQ8WUJ3 1361 aa15.66■□□□□ 0.1
PTCD2-212ENST00000543322 NLRP6P59044 892 aa15.65■□□□□ 0.1
PTCD2-212ENST00000543322 HDGFL1Q5TGJ6 251 aa15.65■□□□□ 0.1
PTCD2-212ENST00000543322 TMEM87AQ8NBN3 555 aa15.65■□□□□ 0.1
PTCD2-212ENST00000543322 TSPY26PQ9H489 355 aa15.65■□□□□ 0.1
PTCD2-212ENST00000543322 IL1RAPL2Q9NP60 686 aa15.65■□□□□ 0.1
PTCD2-212ENST00000543322 CCDC39Q9UFE4 941 aa15.65■□□□□ 0.1
PTCD2-212ENST00000543322 LMO7Q8WWI1 1683 aa15.65■□□□□ 0.1
PTCD2-212ENST00000543322 SGSM2O43147 1006 aa15.65■□□□□ 0.1
PTCD2-212ENST00000543322 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
PTCD2-212ENST00000543322 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
PTCD2-212ENST00000543322 RHPN1Q8TCX5 695 aa15.64■□□□□ 0.09
PTCD2-212ENST00000543322 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
PTCD2-212ENST00000543322 TTC14Q96N46 770 aa15.63■□□□□ 0.09
PTCD2-212ENST00000543322 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
PTCD2-212ENST00000543322 PHF14O94880 888 aa15.63■□□□□ 0.09
PTCD2-212ENST00000543322 HOXB7P09629 217 aa15.63■□□□□ 0.09
PTCD2-212ENST00000543322 KIF1BPQ96EK5 621 aa15.63■□□□□ 0.09
PTCD2-212ENST00000543322 LSG1Q9H089 658 aaKnown RBP15.63■□□□□ 0.09
PTCD2-212ENST00000543322 TCHHQ07283 1943 aa15.62■□□□□ 0.09
PTCD2-212ENST00000543322 SURF6O75683 361 aaKnown RBP15.62■□□□□ 0.09
PTCD2-212ENST00000543322 GLIPR1L2Q4G1C9 344 aa15.62■□□□□ 0.09
PTCD2-212ENST00000543322 SNX14Q9Y5W7 946 aa15.62■□□□□ 0.09
PTCD2-212ENST00000543322 NFAT5O94916 1531 aa15.62■□□□□ 0.09
PTCD2-212ENST00000543322 PHRF1Q9P1Y6 1649 aaKnown RBP15.62■□□□□ 0.09
PTCD2-212ENST00000543322 GADD45BO75293 160 aaPredicted RBP15.61■□□□□ 0.09
PTCD2-212ENST00000543322 USP48Q86UV5 1035 aa15.61■□□□□ 0.09
PTCD2-212ENST00000543322 CNTROBQ8N137 903 aa15.61■□□□□ 0.09
PTCD2-212ENST00000543322 CSPP1Q1MSJ5 1256 aa15.6■□□□□ 0.09
PTCD2-212ENST00000543322 RNF214Q8ND24 703 aa15.6■□□□□ 0.09
PTCD2-212ENST00000543322 CHD2O14647 1828 aaKnown RBP15.6■□□□□ 0.09
PTCD2-212ENST00000543322 SRGAP3O43295 1099 aa15.6■□□□□ 0.09
PTCD2-212ENST00000543322 MAP4K4O95819 1239 aaPredicted RBP15.6■□□□□ 0.09
PTCD2-212ENST00000543322 EIF4A1P60842 406 aaKnown RBP15.6■□□□□ 0.09
PTCD2-212ENST00000543322 XPCQ01831 940 aaPredicted RBP15.6■□□□□ 0.09
PTCD2-212ENST00000543322 BEND3Q5T5X7 828 aa15.6■□□□□ 0.09
PTCD2-212ENST00000543322 HSP90AB4PQ58FF6 505 aa15.59■□□□□ 0.09
PTCD2-212ENST00000543322 GDPD2Q9HCC8 539 aa15.59■□□□□ 0.09
PTCD2-212ENST00000543322 TTC41PQ6P2S7 1318 aa15.59■□□□□ 0.09
PTCD2-212ENST00000543322 NBPF7P0C2Y1 421 aaPredicted RBP15.58■□□□□ 0.09
PTCD2-212ENST00000543322 ZSCAN22P10073 491 aaPredicted RBP15.58■□□□□ 0.09
PTCD2-212ENST00000543322 FAM184AQ8NB25 1140 aa15.58■□□□□ 0.09
PTCD2-212ENST00000543322 DNAAF4Q8WXU2 420 aa15.58■□□□□ 0.09
PTCD2-212ENST00000543322 AK2P54819 239 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 MTX1Q13505 466 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 UVSSAQ2YD98 709 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 CCDC183Q5T5S1 534 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 NUTM2GQ5VZR2 741 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 RUFY3Q7L099 469 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 RASEFQ8IZ41 740 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 USHBP1Q8N6Y0 703 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 LTV1Q96GA3 475 aaPredicted RBP15.58■□□□□ 0.08
PTCD2-212ENST00000543322 CHMP4AQ9BY43 222 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 CHPF2Q9P2E5 772 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 LIMCH1Q9UPQ0 1083 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 R3HCC1Q9Y3T6 440 aaKnown RBP15.58■□□□□ 0.08
PTCD2-212ENST00000543322 ADCY9O60503 1353 aa15.58■□□□□ 0.08
PTCD2-212ENST00000543322 FER1L4A9Z1Z3 1794 aa15.57■□□□□ 0.08
PTCD2-212ENST00000543322 RGPD2P0DJD1 1756 aa15.57■□□□□ 0.08
PTCD2-212ENST00000543322 ADGRL3Q9HAR2 1447 aa15.57■□□□□ 0.08
PTCD2-212ENST00000543322 CEBPAP49715 358 aaPredicted RBP15.56■□□□□ 0.08
PTCD2-212ENST00000543322 KLHL34Q8N239 644 aa15.56■□□□□ 0.08
PTCD2-212ENST00000543322 ABTB2Q8N961 1025 aa15.56■□□□□ 0.08
PTCD2-212ENST00000543322 PDCL3Q9H2J4 239 aa15.56■□□□□ 0.08
PTCD2-212ENST00000543322 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.56■□□□□ 0.08
PTCD2-212ENST00000543322 STX6O43752 255 aa15.56■□□□□ 0.08
PTCD2-212ENST00000543322 GLRX3O76003 335 aaKnown RBP15.56■□□□□ 0.08
PTCD2-212ENST00000543322 FOXD4L6Q3SYB3 417 aaPredicted RBP15.56■□□□□ 0.08
PTCD2-212ENST00000543322 FOXD4L3Q6VB84 417 aaPredicted RBP15.56■□□□□ 0.08
PTCD2-212ENST00000543322 CNPY2Q9Y2B0 182 aa15.56■□□□□ 0.08
PTCD2-212ENST00000543322 PI4KAP2A4QPH2 592 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 SYT1P21579 422 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 PI4KAP1Q8N8J0 262 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 IP6K1Q92551 441 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 KCNB2Q92953 911 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 OVOS2A0A0G2JMS6 1433 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 NCAPD2Q15021 1401 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 LETM1O95202 739 aaPredicted RBP15.55■□□□□ 0.08
PTCD2-212ENST00000543322 F13A1P00488 732 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 EIF2S2P20042 333 aaKnown RBP15.55■□□□□ 0.08
PTCD2-212ENST00000543322 UBE2HP62256 183 aa15.55■□□□□ 0.08
PTCD2-212ENST00000543322 CWC27Q6UX04 472 aaKnown RBP15.54■□□□□ 0.08
PTCD2-212ENST00000543322 SMC3Q9UQE7 1217 aa15.54■□□□□ 0.08
PTCD2-212ENST00000543322 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms