RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
GPN3-203ENST00000543199 POLRMTO00411 1230 aaKnown RBP17.31■□□□□ 0.36
GPN3-203ENST00000543199 CYP19A1P11511 503 aaPredicted RBP17.31■□□□□ 0.36
GPN3-203ENST00000543199 CHRNA5P30532 468 aa17.31■□□□□ 0.36
GPN3-203ENST00000543199 KCPQ6ZWJ8 1503 aa17.31■□□□□ 0.36
GPN3-203ENST00000543199 DALRD3Q5D0E6 543 aaKnown RBP17.3■□□□□ 0.36
GPN3-203ENST00000543199 ZBTB1Q9Y2K1 713 aa17.3■□□□□ 0.36
GPN3-203ENST00000543199 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
GPN3-203ENST00000543199 C9orf131Q5VYM1 1079 aa17.29■□□□□ 0.36
GPN3-203ENST00000543199 COL15A1P39059 1388 aa17.29■□□□□ 0.36
GPN3-203ENST00000543199 TM4SF1P30408 202 aa17.29■□□□□ 0.36
GPN3-203ENST00000543199 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
GPN3-203ENST00000543199 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
GPN3-203ENST00000543199 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
GPN3-203ENST00000543199 NFIXQ14938 502 aa17.27■□□□□ 0.36
GPN3-203ENST00000543199 NARFQ9UHQ1 456 aa17.27■□□□□ 0.36
GPN3-203ENST00000543199 TOMM70O94826 608 aa17.26■□□□□ 0.35
GPN3-203ENST00000543199 ZEB1P37275 1124 aaPredicted RBP17.26■□□□□ 0.35
GPN3-203ENST00000543199 COL3A1P02461 1466 aaPredicted RBP17.25■□□□□ 0.35
GPN3-203ENST00000543199 CANXP27824 592 aaKnown RBP17.25■□□□□ 0.35
GPN3-203ENST00000543199 TTC5Q8N0Z6 440 aa17.25■□□□□ 0.35
GPN3-203ENST00000543199 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
GPN3-203ENST00000543199 BCL2L12Q9HB09 334 aa17.25■□□□□ 0.35
GPN3-203ENST00000543199 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
GPN3-203ENST00000543199 UBR2Q8IWV8 1755 aa17.24■□□□□ 0.35
GPN3-203ENST00000543199 TEFQ10587 303 aa17.23■□□□□ 0.35
GPN3-203ENST00000543199 AFDNP55196 1824 aaKnown RBP17.23■□□□□ 0.35
GPN3-203ENST00000543199 STARD3NLO95772 234 aa17.22■□□□□ 0.35
GPN3-203ENST00000543199 SERPINB2P05120 415 aa17.22■□□□□ 0.35
GPN3-203ENST00000543199 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
GPN3-203ENST00000543199 GAS2L2Q8NHY3 880 aa17.22■□□□□ 0.35
GPN3-203ENST00000543199 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
GPN3-203ENST00000543199 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
GPN3-203ENST00000543199 APLP1P51693 650 aa17.21■□□□□ 0.35
GPN3-203ENST00000543199 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
GPN3-203ENST00000543199 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
GPN3-203ENST00000543199 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.35
GPN3-203ENST00000543199 RASSF7Q02833 373 aa17.21■□□□□ 0.35
GPN3-203ENST00000543199 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
GPN3-203ENST00000543199 NRXN2Q9P2S2 1712 aa17.21■□□□□ 0.35
GPN3-203ENST00000543199 CARMIL3Q8ND23 1372 aa17.2■□□□□ 0.34
GPN3-203ENST00000543199 HEG1Q9ULI3 1381 aa17.2■□□□□ 0.34
GPN3-203ENST00000543199 C16orf71Q8IYS4 520 aaPredicted RBP17.2■□□□□ 0.34
GPN3-203ENST00000543199 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
GPN3-203ENST00000543199 EIF5P55010 431 aaKnown RBP17.19■□□□□ 0.34
GPN3-203ENST00000543199 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
GPN3-203ENST00000543199 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
GPN3-203ENST00000543199 TBC1D9BQ66K14 1250 aa17.18■□□□□ 0.34
GPN3-203ENST00000543199 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
GPN3-203ENST00000543199 RRAGCQ9HB90 399 aa17.18■□□□□ 0.34
GPN3-203ENST00000543199 SBF1O95248 1867 aa17.17■□□□□ 0.34
GPN3-203ENST00000543199 A0A087WZG4 1122 aa17.17■□□□□ 0.34
GPN3-203ENST00000543199 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
GPN3-203ENST00000543199 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
GPN3-203ENST00000543199 PHACTR3Q96KR7 559 aa17.17■□□□□ 0.34
GPN3-203ENST00000543199 TBC1D2BQ9UPU7 963 aa17.17■□□□□ 0.34
GPN3-203ENST00000543199 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
GPN3-203ENST00000543199 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
GPN3-203ENST00000543199 H0YIN7 160 aa17.16■□□□□ 0.34
GPN3-203ENST00000543199 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
GPN3-203ENST00000543199 TEX13AQ9BXU3 409 aaPredicted RBP17.16■□□□□ 0.34
GPN3-203ENST00000543199 CEMIPQ8WUJ3 1361 aa17.16■□□□□ 0.34
GPN3-203ENST00000543199 KCNQ3O43525 872 aa17.15■□□□□ 0.34
GPN3-203ENST00000543199 CCDC24Q8N4L8 307 aa17.15■□□□□ 0.34
GPN3-203ENST00000543199 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
GPN3-203ENST00000543199 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
GPN3-203ENST00000543199 SCN7AQ01118 1682 aa17.15■□□□□ 0.34
GPN3-203ENST00000543199 BTBD11A6QL63 1104 aa17.14■□□□□ 0.33
GPN3-203ENST00000543199 A1BGP04217 495 aa17.14■□□□□ 0.33
GPN3-203ENST00000543199 LMNB1P20700 586 aa17.14■□□□□ 0.33
GPN3-203ENST00000543199 IL6STP40189 918 aaPredicted RBP17.14■□□□□ 0.33
GPN3-203ENST00000543199 PRELPP51888 382 aa17.14■□□□□ 0.33
GPN3-203ENST00000543199 HTRA3P83110 453 aa17.14■□□□□ 0.33
GPN3-203ENST00000543199 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
GPN3-203ENST00000543199 DNAJC5GQ8N7S2 189 aa17.14■□□□□ 0.33
GPN3-203ENST00000543199 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
GPN3-203ENST00000543199 ZNF622Q969S3 477 aaKnown RBP eCLIP17.13■□□□□ 0.33
GPN3-203ENST00000543199 WDR90Q96KV7 1748 aa17.13■□□□□ 0.33
GPN3-203ENST00000543199 NFKBIEO00221 500 aa17.12■□□□□ 0.33
GPN3-203ENST00000543199 PIP4K2AP48426 406 aaPredicted RBP17.12■□□□□ 0.33
GPN3-203ENST00000543199 FSTL1Q12841 308 aa17.12■□□□□ 0.33
GPN3-203ENST00000543199 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
GPN3-203ENST00000543199 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
GPN3-203ENST00000543199 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
GPN3-203ENST00000543199 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
GPN3-203ENST00000543199 NPHP1O15259 732 aa17.11■□□□□ 0.33
GPN3-203ENST00000543199 CAMTA2O94983 1202 aa17.11■□□□□ 0.33
GPN3-203ENST00000543199 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
GPN3-203ENST00000543199 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.33
GPN3-203ENST00000543199 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
GPN3-203ENST00000543199 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 PDE6BP35913 854 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 MCM10Q7L590 875 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 C21orf2O43822 256 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 DZIP3Q86Y13 1208 aaKnown RBP17.1■□□□□ 0.33
GPN3-203ENST00000543199 CNBD1Q8NA66 436 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms