RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 TEFQ10587 303 aa16.19■□□□□ 0.18
PTPN6-220ENST00000543115 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
PTPN6-220ENST00000543115 ZNF496Q96IT1 587 aaPredicted RBP16.19■□□□□ 0.18
PTPN6-220ENST00000543115 CEMIPQ8WUJ3 1361 aa16.18■□□□□ 0.18
PTPN6-220ENST00000543115 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
PTPN6-220ENST00000543115 ZPR1O75312 459 aa16.18■□□□□ 0.18
PTPN6-220ENST00000543115 ZNF790Q6PG37 636 aa16.18■□□□□ 0.18
PTPN6-220ENST00000543115 ZNF526Q8TF50 670 aaPredicted RBP16.18■□□□□ 0.18
PTPN6-220ENST00000543115 BCL2L12Q9HB09 334 aa16.18■□□□□ 0.18
PTPN6-220ENST00000543115 NARFQ9UHQ1 456 aa16.18■□□□□ 0.18
PTPN6-220ENST00000543115 HEG1Q9ULI3 1381 aa16.17■□□□□ 0.18
PTPN6-220ENST00000543115 FCHSD2O94868 740 aa16.17■□□□□ 0.18
PTPN6-220ENST00000543115 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
PTPN6-220ENST00000543115 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
PTPN6-220ENST00000543115 KCNQ3O43525 872 aa16.16■□□□□ 0.18
PTPN6-220ENST00000543115 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
PTPN6-220ENST00000543115 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
PTPN6-220ENST00000543115 NFIXQ14938 502 aa16.16■□□□□ 0.18
PTPN6-220ENST00000543115 GPBP1L1Q9HC44 474 aaPredicted RBP16.16■□□□□ 0.18
PTPN6-220ENST00000543115 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
PTPN6-220ENST00000543115 CHRNA5P30532 468 aa16.15■□□□□ 0.18
PTPN6-220ENST00000543115 BRCA1P38398 1863 aaKnown RBP16.15■□□□□ 0.18
PTPN6-220ENST00000543115 STARD3NLO95772 234 aa16.14■□□□□ 0.17
PTPN6-220ENST00000543115 EIF5P55010 431 aaKnown RBP16.14■□□□□ 0.17
PTPN6-220ENST00000543115 IFFO2Q5TF58 517 aa16.14■□□□□ 0.17
PTPN6-220ENST00000543115 ARHGAP27Q6ZUM4 889 aa16.14■□□□□ 0.17
PTPN6-220ENST00000543115 PIM2Q9P1W9 311 aa16.13■□□□□ 0.17
PTPN6-220ENST00000543115 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
PTPN6-220ENST00000543115 DCTN1Q14203 1278 aa16.12■□□□□ 0.17
PTPN6-220ENST00000543115 MCM10Q7L590 875 aa16.12■□□□□ 0.17
PTPN6-220ENST00000543115 FMNL2Q96PY5 1086 aa16.12■□□□□ 0.17
PTPN6-220ENST00000543115 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
PTPN6-220ENST00000543115 A1BGP04217 495 aa16.11■□□□□ 0.17
PTPN6-220ENST00000543115 SERPINB2P05120 415 aa16.11■□□□□ 0.17
PTPN6-220ENST00000543115 DALRD3Q5D0E6 543 aaKnown RBP16.11■□□□□ 0.17
PTPN6-220ENST00000543115 TEX13AQ9BXU3 409 aaPredicted RBP16.11■□□□□ 0.17
PTPN6-220ENST00000543115 CARMIL3Q8ND23 1372 aa16.11■□□□□ 0.17
PTPN6-220ENST00000543115 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
PTPN6-220ENST00000543115 BICDL1Q6ZP65 573 aa16.1■□□□□ 0.17
PTPN6-220ENST00000543115 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
PTPN6-220ENST00000543115 ZNF330Q9Y3S2 320 aaPredicted RBP16.1■□□□□ 0.17
PTPN6-220ENST00000543115 AFDNP55196 1824 aaKnown RBP16.1■□□□□ 0.17
PTPN6-220ENST00000543115 KIF3CO14782 793 aa16.09■□□□□ 0.17
PTPN6-220ENST00000543115 IL6STP40189 918 aaPredicted RBP16.09■□□□□ 0.17
PTPN6-220ENST00000543115 TBC1D9BQ66K14 1250 aa16.09■□□□□ 0.17
PTPN6-220ENST00000543115 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
PTPN6-220ENST00000543115 USP16Q9Y5T5 823 aa16.09■□□□□ 0.17
PTPN6-220ENST00000543115 SCN7AQ01118 1682 aa16.08■□□□□ 0.17
PTPN6-220ENST00000543115 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.17
PTPN6-220ENST00000543115 A0A087WZG4 1122 aa16.08■□□□□ 0.16
PTPN6-220ENST00000543115 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.16
PTPN6-220ENST00000543115 C9orf131Q5VYM1 1079 aa16.07■□□□□ 0.16
PTPN6-220ENST00000543115 CAMTA2O94983 1202 aa16.06■□□□□ 0.16
PTPN6-220ENST00000543115 HTATSF1O43719 755 aaKnown RBP16.05■□□□□ 0.16
PTPN6-220ENST00000543115 CCDC24Q8N4L8 307 aa16.05■□□□□ 0.16
PTPN6-220ENST00000543115 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
PTPN6-220ENST00000543115 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
PTPN6-220ENST00000543115 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
PTPN6-220ENST00000543115 C2CD5Q86YS7 1000 aa16.04■□□□□ 0.16
PTPN6-220ENST00000543115 NMRK2Q9NPI5 230 aa16.04■□□□□ 0.16
PTPN6-220ENST00000543115 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
PTPN6-220ENST00000543115 DLEC1Q9Y238 1755 aa16.03■□□□□ 0.16
PTPN6-220ENST00000543115 PRELPP51888 382 aa16.03■□□□□ 0.16
PTPN6-220ENST00000543115 RASSF7Q02833 373 aa16.03■□□□□ 0.16
PTPN6-220ENST00000543115 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
PTPN6-220ENST00000543115 PRR5LQ6MZQ0 368 aa16.03■□□□□ 0.16
PTPN6-220ENST00000543115 RNF181Q9P0P0 153 aa16.03■□□□□ 0.16
PTPN6-220ENST00000543115 NBPF26B4DH59 902 aa16.02■□□□□ 0.16
PTPN6-220ENST00000543115 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.16
PTPN6-220ENST00000543115 NBPF15Q8N660 670 aa16.02■□□□□ 0.16
PTPN6-220ENST00000543115 TTLL6Q8N841 843 aa16.02■□□□□ 0.16
PTPN6-220ENST00000543115 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
PTPN6-220ENST00000543115 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
PTPN6-220ENST00000543115 H0YIN7 160 aa16.01■□□□□ 0.15
PTPN6-220ENST00000543115 HSPA6P17066 643 aa16.01■□□□□ 0.15
PTPN6-220ENST00000543115 NPM2Q86SE8 214 aaKnown RBP16.01■□□□□ 0.15
PTPN6-220ENST00000543115 THUMPD2Q9BTF0 503 aaKnown RBP16.01■□□□□ 0.15
PTPN6-220ENST00000543115 SETDB2Q96T68 719 aa16■□□□□ 0.15
PTPN6-220ENST00000543115 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
PTPN6-220ENST00000543115 NEFMP07197 916 aa15.99■□□□□ 0.15
PTPN6-220ENST00000543115 NFE2L2Q16236 605 aa15.99■□□□□ 0.15
PTPN6-220ENST00000543115 CNBD1Q8NA66 436 aa15.99■□□□□ 0.15
PTPN6-220ENST00000543115 COL11A2P13942 1736 aaPredicted RBP15.99■□□□□ 0.15
PTPN6-220ENST00000543115 NFKBIEO00221 500 aa15.98■□□□□ 0.15
PTPN6-220ENST00000543115 TOMM70O94826 608 aa15.98■□□□□ 0.15
PTPN6-220ENST00000543115 PDE6BP35913 854 aa15.98■□□□□ 0.15
PTPN6-220ENST00000543115 ZNF622Q969S3 477 aaKnown RBP eCLIP15.98■□□□□ 0.15
PTPN6-220ENST00000543115 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
PTPN6-220ENST00000543115 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
PTPN6-220ENST00000543115 KDM3BQ7LBC6 1761 aa15.97■□□□□ 0.15
PTPN6-220ENST00000543115 LMNB1P20700 586 aa15.96■□□□□ 0.15
PTPN6-220ENST00000543115 EIF4A1P60842 406 aaKnown RBP15.96■□□□□ 0.15
PTPN6-220ENST00000543115 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.15
PTPN6-220ENST00000543115 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
PTPN6-220ENST00000543115 PDZRN3Q9UPQ7 1066 aa15.96■□□□□ 0.15
PTPN6-220ENST00000543115 SBF1O95248 1867 aa15.96■□□□□ 0.15
PTPN6-220ENST00000543115 KDM2BQ8NHM5 1336 aa15.95■□□□□ 0.14
PTPN6-220ENST00000543115 MAPK8IP3Q9UPT6 1336 aa15.95■□□□□ 0.14
PTPN6-220ENST00000543115 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
PTPN6-220ENST00000543115 NPHP1O15259 732 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms