RNA–Protein interactions for RNA: ENST00000543087.5

TSG101-208, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-208ENST00000543087 KIF13BQ9NQT8 1826 aa17.39■□□□□ 0.37
TSG101-208ENST00000543087 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
TSG101-208ENST00000543087 A0A0G2JLW4 131 aa17.38■□□□□ 0.37
TSG101-208ENST00000543087 STARD3NLO95772 234 aa17.38■□□□□ 0.37
TSG101-208ENST00000543087 CEMIPQ8WUJ3 1361 aa17.38■□□□□ 0.37
TSG101-208ENST00000543087 NEFMP07197 916 aa17.36■□□□□ 0.37
TSG101-208ENST00000543087 FMNL2Q96PY5 1086 aa17.36■□□□□ 0.37
TSG101-208ENST00000543087 ZNF330Q9Y3S2 320 aaPredicted RBP17.36■□□□□ 0.37
TSG101-208ENST00000543087 HEG1Q9ULI3 1381 aa17.36■□□□□ 0.37
TSG101-208ENST00000543087 TGFB2P61812 414 aa17.35■□□□□ 0.37
TSG101-208ENST00000543087 DDR1Q08345 913 aa17.35■□□□□ 0.37
TSG101-208ENST00000543087 TEX13AQ9BXU3 409 aaPredicted RBP17.35■□□□□ 0.37
TSG101-208ENST00000543087 NARFQ9UHQ1 456 aa17.35■□□□□ 0.37
TSG101-208ENST00000543087 COL15A1P39059 1388 aa17.35■□□□□ 0.37
TSG101-208ENST00000543087 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
TSG101-208ENST00000543087 A1BGP04217 495 aa17.34■□□□□ 0.37
TSG101-208ENST00000543087 DPEP1P16444 411 aa17.34■□□□□ 0.37
TSG101-208ENST00000543087 TM4SF1P30408 202 aa17.34■□□□□ 0.37
TSG101-208ENST00000543087 RALBP1Q15311 655 aa17.34■□□□□ 0.37
TSG101-208ENST00000543087 AFDNP55196 1824 aaKnown RBP17.33■□□□□ 0.37
TSG101-208ENST00000543087 PXDNLA1KZ92 1463 aa17.33■□□□□ 0.37
TSG101-208ENST00000543087 C10orf71Q711Q0 1435 aa17.33■□□□□ 0.36
TSG101-208ENST00000543087 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
TSG101-208ENST00000543087 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
TSG101-208ENST00000543087 BCS1LQ9Y276 419 aa17.33■□□□□ 0.36
TSG101-208ENST00000543087 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
TSG101-208ENST00000543087 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
TSG101-208ENST00000543087 EIF5P55010 431 aaKnown RBP17.32■□□□□ 0.36
TSG101-208ENST00000543087 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
TSG101-208ENST00000543087 BCL2L12Q9HB09 334 aa17.32■□□□□ 0.36
TSG101-208ENST00000543087 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
TSG101-208ENST00000543087 NFIXQ14938 502 aa17.31■□□□□ 0.36
TSG101-208ENST00000543087 TAF7Q15545 349 aaPredicted RBP17.31■□□□□ 0.36
TSG101-208ENST00000543087 BICDL1Q6ZP65 573 aa17.31■□□□□ 0.36
TSG101-208ENST00000543087 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
TSG101-208ENST00000543087 A0A087WZG4 1122 aa17.3■□□□□ 0.36
TSG101-208ENST00000543087 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
TSG101-208ENST00000543087 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
TSG101-208ENST00000543087 BRCA1P38398 1863 aaKnown RBP17.3■□□□□ 0.36
TSG101-208ENST00000543087 MAPK8IP3Q9UPT6 1336 aa17.29■□□□□ 0.36
TSG101-208ENST00000543087 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
TSG101-208ENST00000543087 NPM2Q86SE8 214 aaKnown RBP17.29■□□□□ 0.36
TSG101-208ENST00000543087 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
TSG101-208ENST00000543087 SERPINB2P05120 415 aa17.28■□□□□ 0.36
TSG101-208ENST00000543087 SNRPA1P09661 255 aaKnown RBP17.28■□□□□ 0.36
TSG101-208ENST00000543087 KCNA3P22001 575 aa17.28■□□□□ 0.36
TSG101-208ENST00000543087 CHRNA5P30532 468 aa17.28■□□□□ 0.36
TSG101-208ENST00000543087 IL6STP40189 918 aaPredicted RBP17.28■□□□□ 0.36
TSG101-208ENST00000543087 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
TSG101-208ENST00000543087 ARHGAP27Q6ZUM4 889 aa17.27■□□□□ 0.36
TSG101-208ENST00000543087 PIM2Q9P1W9 311 aa17.27■□□□□ 0.36
TSG101-208ENST00000543087 TBC1D9BQ66K14 1250 aa17.26■□□□□ 0.35
TSG101-208ENST00000543087 ZNF526Q8TF50 670 aaPredicted RBP17.25■□□□□ 0.35
TSG101-208ENST00000543087 ARFGEF1Q9Y6D6 1849 aa17.25■□□□□ 0.35
TSG101-208ENST00000543087 RIPK4P57078 832 aa17.24■□□□□ 0.35
TSG101-208ENST00000543087 DALRD3Q5D0E6 543 aaKnown RBP17.24■□□□□ 0.35
TSG101-208ENST00000543087 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
TSG101-208ENST00000543087 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
TSG101-208ENST00000543087 ATP10DQ9P241 1426 aa17.23■□□□□ 0.35
TSG101-208ENST00000543087 KDM3BQ7LBC6 1761 aa17.23■□□□□ 0.35
TSG101-208ENST00000543087 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
TSG101-208ENST00000543087 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
TSG101-208ENST00000543087 CCDC24Q8N4L8 307 aa17.23■□□□□ 0.35
TSG101-208ENST00000543087 PNISRQ8TF01 805 aaKnown RBP17.23■□□□□ 0.35
TSG101-208ENST00000543087 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
TSG101-208ENST00000543087 NBPF26B4DH59 902 aa17.22■□□□□ 0.35
TSG101-208ENST00000543087 NEUROD2Q15784 382 aa17.22■□□□□ 0.35
TSG101-208ENST00000543087 NBPF10Q6P3W6 841 aaKnown RBP17.22■□□□□ 0.35
TSG101-208ENST00000543087 NBPF15Q8N660 670 aa17.22■□□□□ 0.35
TSG101-208ENST00000543087 SETDB2Q96T68 719 aa17.22■□□□□ 0.35
TSG101-208ENST00000543087 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
TSG101-208ENST00000543087 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
TSG101-208ENST00000543087 WDR43Q15061 677 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSG101-208ENST00000543087 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
TSG101-208ENST00000543087 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
TSG101-208ENST00000543087 CARMIL3Q8ND23 1372 aa17.2■□□□□ 0.34
TSG101-208ENST00000543087 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
TSG101-208ENST00000543087 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
TSG101-208ENST00000543087 C2CD5Q86YS7 1000 aa17.2■□□□□ 0.34
TSG101-208ENST00000543087 PRKRIP1Q9H875 184 aaPredicted RBP17.2■□□□□ 0.34
TSG101-208ENST00000543087 GPBP1L1Q9HC44 474 aaPredicted RBP17.2■□□□□ 0.34
TSG101-208ENST00000543087 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
TSG101-208ENST00000543087 H0YIN7 160 aa17.19■□□□□ 0.34
TSG101-208ENST00000543087 NPHP1O15259 732 aa17.19■□□□□ 0.34
TSG101-208ENST00000543087 C1QTNF8P60827 252 aa17.19■□□□□ 0.34
TSG101-208ENST00000543087 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
TSG101-208ENST00000543087 ADCY9O60503 1353 aa17.18■□□□□ 0.34
TSG101-208ENST00000543087 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
TSG101-208ENST00000543087 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
TSG101-208ENST00000543087 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
TSG101-208ENST00000543087 SBF1O95248 1867 aa17.18■□□□□ 0.34
TSG101-208ENST00000543087 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
TSG101-208ENST00000543087 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
TSG101-208ENST00000543087 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
TSG101-208ENST00000543087 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
TSG101-208ENST00000543087 RUNDC1Q96C34 613 aa17.17■□□□□ 0.34
TSG101-208ENST00000543087 CACNA1SQ13698 1873 aa17.16■□□□□ 0.34
TSG101-208ENST00000543087 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
TSG101-208ENST00000543087 MYL6BP14649 208 aa17.16■□□□□ 0.34
TSG101-208ENST00000543087 C9orf131Q5VYM1 1079 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms