RNA–Protein interactions for RNA: ENST00000543044.2

AP003108.2-208, humanhuman

TSL 3 BASIC

Gene AP003108.2, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-208ENST00000543044 TOMM70O94826 608 aa12.03□□□□□ -0.48
AP003108.2-208ENST00000543044 STARD3NLO95772 234 aa12.03□□□□□ -0.48
AP003108.2-208ENST00000543044 CHRNA5P30532 468 aa12.03□□□□□ -0.48
AP003108.2-208ENST00000543044 NFIXQ14938 502 aa12.03□□□□□ -0.48
AP003108.2-208ENST00000543044 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
AP003108.2-208ENST00000543044 TTC5Q8N0Z6 440 aa12.03□□□□□ -0.48
AP003108.2-208ENST00000543044 GAS2L2Q8NHY3 880 aa12.03□□□□□ -0.48
AP003108.2-208ENST00000543044 COL3A1P02461 1466 aaPredicted RBP12.02□□□□□ -0.48
AP003108.2-208ENST00000543044 GNAT3A8MTJ3 354 aa12.02□□□□□ -0.49
AP003108.2-208ENST00000543044 TEFQ10587 303 aa12.02□□□□□ -0.49
AP003108.2-208ENST00000543044 IL17REQ8NFR9 667 aa12.02□□□□□ -0.49
AP003108.2-208ENST00000543044 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
AP003108.2-208ENST00000543044 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.49
AP003108.2-208ENST00000543044 A0A087WZG4 1122 aa12.01□□□□□ -0.49
AP003108.2-208ENST00000543044 SERPINB2P05120 415 aa12.01□□□□□ -0.49
AP003108.2-208ENST00000543044 CANXP27824 592 aaKnown RBP12.01□□□□□ -0.49
AP003108.2-208ENST00000543044 EIF5P55010 431 aaKnown RBP12.01□□□□□ -0.49
AP003108.2-208ENST00000543044 CNGB1Q14028 1251 aaPredicted RBP12.01□□□□□ -0.49
AP003108.2-208ENST00000543044 ZNF790Q6PG37 636 aa12.01□□□□□ -0.49
AP003108.2-208ENST00000543044 TEX13AQ9BXU3 409 aaPredicted RBP12.01□□□□□ -0.49
AP003108.2-208ENST00000543044 NMRK2Q9NPI5 230 aa12.01□□□□□ -0.49
AP003108.2-208ENST00000543044 APLP1P51693 650 aa12□□□□□ -0.49
AP003108.2-208ENST00000543044 ZNF496Q96IT1 587 aaPredicted RBP12□□□□□ -0.49
AP003108.2-208ENST00000543044 RNF181Q9P0P0 153 aa12□□□□□ -0.49
AP003108.2-208ENST00000543044 HEG1Q9ULI3 1381 aa12□□□□□ -0.49
AP003108.2-208ENST00000543044 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
AP003108.2-208ENST00000543044 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
AP003108.2-208ENST00000543044 ARFGEF1Q9Y6D6 1849 aa11.99□□□□□ -0.49
AP003108.2-208ENST00000543044 CEMIPQ8WUJ3 1361 aa11.98□□□□□ -0.49
AP003108.2-208ENST00000543044 C16orf71Q8IYS4 520 aaPredicted RBP11.98□□□□□ -0.49
AP003108.2-208ENST00000543044 TTLL6Q8N841 843 aa11.98□□□□□ -0.49
AP003108.2-208ENST00000543044 RBM46Q8TBY0 533 aaKnown RBP11.98□□□□□ -0.49
AP003108.2-208ENST00000543044 FMNL2Q96PY5 1086 aa11.98□□□□□ -0.49
AP003108.2-208ENST00000543044 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 H0YIN7 160 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 PRKAR2BP31323 418 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 IL6STP40189 918 aaPredicted RBP11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 BICDL1Q6ZP65 573 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 C2CD5Q86YS7 1000 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 PHACTR3Q96KR7 559 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 PDZRN3Q9UPQ7 1066 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 NUDCQ9Y266 331 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 NRXN2Q9P2S2 1712 aa11.97□□□□□ -0.49
AP003108.2-208ENST00000543044 BTBD11A6QL63 1104 aa11.96□□□□□ -0.49
AP003108.2-208ENST00000543044 LMNB1P20700 586 aa11.96□□□□□ -0.49
AP003108.2-208ENST00000543044 FSTL1Q12841 308 aa11.96□□□□□ -0.49
AP003108.2-208ENST00000543044 IFFO2Q5TF58 517 aa11.96□□□□□ -0.49
AP003108.2-208ENST00000543044 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
AP003108.2-208ENST00000543044 NPM2Q86SE8 214 aaKnown RBP11.96□□□□□ -0.49
AP003108.2-208ENST00000543044 A1BGP04217 495 aa11.95□□□□□ -0.5
AP003108.2-208ENST00000543044 RASSF7Q02833 373 aa11.95□□□□□ -0.5
AP003108.2-208ENST00000543044 DNAJC5GQ8N7S2 189 aa11.95□□□□□ -0.5
AP003108.2-208ENST00000543044 BRIP1Q9BX63 1249 aa11.95□□□□□ -0.5
AP003108.2-208ENST00000543044 RRAGCQ9HB90 399 aa11.95□□□□□ -0.5
AP003108.2-208ENST00000543044 TBC1D2BQ9UPU7 963 aa11.95□□□□□ -0.5
AP003108.2-208ENST00000543044 ZNF330Q9Y3S2 320 aaPredicted RBP11.95□□□□□ -0.5
AP003108.2-208ENST00000543044 VIRMAQ69YN4 1812 aaKnown RBP11.95□□□□□ -0.5
AP003108.2-208ENST00000543044 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
AP003108.2-208ENST00000543044 KCNQ3O43525 872 aa11.94□□□□□ -0.5
AP003108.2-208ENST00000543044 U2AF1L5P0DN76 240 aaPredicted RBP11.94□□□□□ -0.5
AP003108.2-208ENST00000543044 PDE6BP35913 854 aa11.94□□□□□ -0.5
AP003108.2-208ENST00000543044 U2AF1Q01081 240 aaKnown RBP eCLIP11.94□□□□□ -0.5
AP003108.2-208ENST00000543044 RTF1Q92541 710 aaKnown RBP11.94□□□□□ -0.5
AP003108.2-208ENST00000543044 AFDNP55196 1824 aaKnown RBP11.94□□□□□ -0.5
AP003108.2-208ENST00000543044 CAMTA2O94983 1202 aa11.93□□□□□ -0.5
AP003108.2-208ENST00000543044 PPP2R1AP30153 589 aa11.93□□□□□ -0.5
AP003108.2-208ENST00000543044 PRR5LQ6MZQ0 368 aa11.93□□□□□ -0.5
AP003108.2-208ENST00000543044 SETDB2Q96T68 719 aa11.93□□□□□ -0.5
AP003108.2-208ENST00000543044 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 NFKBIEO00221 500 aa11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 SNRPA1P09661 255 aaKnown RBP11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 PRELPP51888 382 aa11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 DZIP3Q86Y13 1208 aaKnown RBP11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 ZNF622Q969S3 477 aaKnown RBP eCLIP11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 USP16Q9Y5T5 823 aa11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 SIPA1L3O60292 1781 aaPredicted RBP11.92□□□□□ -0.5
AP003108.2-208ENST00000543044 VEGFAP15692 232 aaPredicted RBP11.91□□□□□ -0.5
AP003108.2-208ENST00000543044 CLEC4GQ6UXB4 293 aa11.91□□□□□ -0.5
AP003108.2-208ENST00000543044 MCM10Q7L590 875 aa11.91□□□□□ -0.5
AP003108.2-208ENST00000543044 SMC1BQ8NDV3 1235 aa11.91□□□□□ -0.5
AP003108.2-208ENST00000543044 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
AP003108.2-208ENST00000543044 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.5
AP003108.2-208ENST00000543044 NPHP1O15259 732 aa11.9□□□□□ -0.5
AP003108.2-208ENST00000543044 C21orf2O43822 256 aa11.9□□□□□ -0.5
AP003108.2-208ENST00000543044 SBF1O95248 1867 aa11.9□□□□□ -0.5
AP003108.2-208ENST00000543044 ST5P78524 1137 aa11.9□□□□□ -0.5
AP003108.2-208ENST00000543044 CCDC24Q8N4L8 307 aa11.9□□□□□ -0.5
AP003108.2-208ENST00000543044 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
AP003108.2-208ENST00000543044 RGL2O15211 777 aa11.89□□□□□ -0.51
AP003108.2-208ENST00000543044 SRGNP10124 158 aa11.89□□□□□ -0.51
AP003108.2-208ENST00000543044 STYK1Q6J9G0 422 aa11.89□□□□□ -0.51
AP003108.2-208ENST00000543044 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
AP003108.2-208ENST00000543044 CNKSR1Q969H4 720 aa11.89□□□□□ -0.51
AP003108.2-208ENST00000543044 KLRG1Q96E93 195 aa11.89□□□□□ -0.51
AP003108.2-208ENST00000543044 ZNF652Q9Y2D9 606 aa11.89□□□□□ -0.51
AP003108.2-208ENST00000543044 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms