RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 UBE2HP62256 183 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 KLHL10Q6JEL2 608 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 FSIP1Q8NA03 581 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 CALCOCO1Q9P1Z2 691 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 ABCC5O15440 1437 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 GJB2P29033 226 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 ZNF76P36508 570 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 TSG101Q99816 390 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 GOLGA6L9A6NEM1 432 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 F6X3S4 739 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 FGFR1OPO95684 399 aaKnown RBP15.22■□□□□ 0.03
TNC-212ENST00000542877 C16orf45Q96MC5 204 aaPredicted RBP15.22■□□□□ 0.03
TNC-212ENST00000542877 CNNM3Q8NE01 707 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 PRIMPOLQ96LW4 560 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 MYD88Q99836 296 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 ECHDC1Q9NTX5 307 aa15.22■□□□□ 0.03
TNC-212ENST00000542877 ZNF213O14771 459 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 TTC22Q5TAA0 569 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 CCDC8Q9H0W5 538 aaPredicted RBP15.21■□□□□ 0.03
TNC-212ENST00000542877 ABCF2Q9UG63 623 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 DYNC1I1O14576 645 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 USO1O60763 962 aaKnown RBP15.21■□□□□ 0.03
TNC-212ENST00000542877 CETN2P41208 172 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 ANKLE2Q86XL3 938 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 PIBF1Q8WXW3 757 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 YEATS4O95619 227 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 IGHDP01880 384 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 SEC63Q9UGP8 760 aaKnown RBP15.21■□□□□ 0.03
TNC-212ENST00000542877 KIAA0586Q9BVV6 1533 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 HDAC1Q13547 482 aaPredicted RBP15.21■□□□□ 0.03
TNC-212ENST00000542877 VPS36Q86VN1 386 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
TNC-212ENST00000542877 CCDC85AQ96PX6 553 aaPredicted RBP15.21■□□□□ 0.03
TNC-212ENST00000542877 SPINK5Q9NQ38 1064 aaPredicted RBP15.21■□□□□ 0.03
TNC-212ENST00000542877 SLC12A7Q9Y666 1083 aa15.21■□□□□ 0.03
TNC-212ENST00000542877 RPRD2Q5VT52 1461 aaKnown RBP15.21■□□□□ 0.02
TNC-212ENST00000542877 DESP17661 470 aa15.21■□□□□ 0.02
TNC-212ENST00000542877 CACNA2D4Q7Z3S7 1137 aa15.21■□□□□ 0.02
TNC-212ENST00000542877 HYPKQ9NX55 129 aa15.21■□□□□ 0.02
TNC-212ENST00000542877 PAFAH1B1P43034 410 aa15.2■□□□□ 0.02
TNC-212ENST00000542877 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
TNC-212ENST00000542877 GUCY1B3Q02153 619 aa15.2■□□□□ 0.02
TNC-212ENST00000542877 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
TNC-212ENST00000542877 FLIIQ13045 1269 aa15.2■□□□□ 0.02
TNC-212ENST00000542877 TRMT1Q9NXH9 659 aaKnown RBP15.2■□□□□ 0.02
TNC-212ENST00000542877 SCAF11Q99590 1463 aaKnown RBP15.2■□□□□ 0.02
TNC-212ENST00000542877 POTEJP0CG39 1038 aa15.2■□□□□ 0.02
TNC-212ENST00000542877 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
TNC-212ENST00000542877 RNF41Q9H4P4 317 aaPredicted RBP15.2■□□□□ 0.02
TNC-212ENST00000542877 ZNF165P49910 485 aa15.2■□□□□ 0.02
TNC-212ENST00000542877 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
TNC-212ENST00000542877 PAF1Q8N7H5 531 aa15.2■□□□□ 0.02
TNC-212ENST00000542877 USP5P45974 858 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 GDPD2Q9HCC8 539 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
TNC-212ENST00000542877 LRSAM1Q6UWE0 723 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 NME9Q86XW9 330 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 NUP88Q99567 741 aaPredicted RBP15.19■□□□□ 0.02
TNC-212ENST00000542877 FAM107BQ9H098 131 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 PAXBP1Q9Y5B6 917 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 GOLGA8BA8MQT2 603 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 ZSCAN23Q3MJ62 389 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 TMC6Q7Z403 805 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 EMILIN1Q9Y6C2 1016 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 MINDY4BA8MYZ0 360 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
TNC-212ENST00000542877 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 PRDM10Q9NQV6 1147 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 KIF20AO95235 890 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.02
TNC-212ENST00000542877 CAVIN4Q5BKX8 364 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 IQCA1Q86XH1 822 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 ARHGAP45Q92619 1136 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 DNMBPQ6XZF7 1577 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 GOLGA8AA7E2F4 631 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 NUCB1Q02818 461 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 CCDC150Q8NCX0 1101 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 SNW1Q13573 536 aaKnown RBP15.18■□□□□ 0.02
TNC-212ENST00000542877 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
TNC-212ENST00000542877 TFIP11Q9UBB9 837 aaKnown RBP15.18■□□□□ 0.02
TNC-212ENST00000542877 IFIT5Q13325 482 aaKnown RBP15.18■□□□□ 0.02
TNC-212ENST00000542877 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
TNC-212ENST00000542877 DYDC1Q8WWB3 177 aa15.17■□□□□ 0.02
TNC-212ENST00000542877 ZSCAN16Q9H4T2 348 aaPredicted RBP15.17■□□□□ 0.02
TNC-212ENST00000542877 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
TNC-212ENST00000542877 MAP2K1Q02750 393 aaPredicted RBP15.17■□□□□ 0.02
TNC-212ENST00000542877 MICALCLQ6ZW33 695 aa15.17■□□□□ 0.02
TNC-212ENST00000542877 FAM135AQ9P2D6 1515 aa15.17■□□□□ 0.02
TNC-212ENST00000542877 MKNK2Q9HBH9 465 aa15.17■□□□□ 0.02
TNC-212ENST00000542877 CCT2P78371 535 aaKnown RBP15.16■□□□□ 0.02
TNC-212ENST00000542877 BMS1Q14692 1282 aaKnown RBP15.16■□□□□ 0.02
TNC-212ENST00000542877 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
TNC-212ENST00000542877 PYM1Q9BRP8 204 aaKnown RBP15.16■□□□□ 0.02
TNC-212ENST00000542877 RBM27Q9P2N5 1060 aaKnown RBP15.16■□□□□ 0.02
TNC-212ENST00000542877 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
TNC-212ENST00000542877 IFIT3O14879 490 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms