RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 PRELPP51888 382 aa15.43■□□□□ 0.06
SRGAP1-205ENST00000542841 ZNF530Q6P9A1 599 aaPredicted RBP15.43■□□□□ 0.06
SRGAP1-205ENST00000542841 TNRC6CQ9HCJ0 1690 aaKnown RBP15.43■□□□□ 0.06
SRGAP1-205ENST00000542841 KDM6AO15550 1401 aaPredicted RBP15.43■□□□□ 0.06
SRGAP1-205ENST00000542841 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
SRGAP1-205ENST00000542841 MTHFSP49914 203 aa15.42■□□□□ 0.06
SRGAP1-205ENST00000542841 C1orf141Q5JVX7 400 aa15.42■□□□□ 0.06
SRGAP1-205ENST00000542841 MYH14Q7Z406 1995 aaKnown RBP15.42■□□□□ 0.06
SRGAP1-205ENST00000542841 POLRMTO00411 1230 aaKnown RBP15.41■□□□□ 0.06
SRGAP1-205ENST00000542841 NFATC2IPQ8NCF5 419 aa15.41■□□□□ 0.06
SRGAP1-205ENST00000542841 ZPR1O75312 459 aa15.4■□□□□ 0.06
SRGAP1-205ENST00000542841 VEGFAP15692 232 aaPredicted RBP15.4■□□□□ 0.06
SRGAP1-205ENST00000542841 TM4SF1P30408 202 aa15.4■□□□□ 0.06
SRGAP1-205ENST00000542841 GLTPD2A6NH11 291 aa15.39■□□□□ 0.05
SRGAP1-205ENST00000542841 LMNB1P20700 586 aa15.39■□□□□ 0.05
SRGAP1-205ENST00000542841 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
SRGAP1-205ENST00000542841 RASSF7Q02833 373 aa15.39■□□□□ 0.05
SRGAP1-205ENST00000542841 SBF1O95248 1867 aa15.39■□□□□ 0.05
SRGAP1-205ENST00000542841 HSPA1AP0DMV8 641 aaKnown RBP15.38■□□□□ 0.05
SRGAP1-205ENST00000542841 HSPA1BP0DMV9 641 aaKnown RBP15.38■□□□□ 0.05
SRGAP1-205ENST00000542841 INTS5Q6P9B9 1019 aaKnown RBP15.38■□□□□ 0.05
SRGAP1-205ENST00000542841 MORC1Q86VD1 984 aa15.38■□□□□ 0.05
SRGAP1-205ENST00000542841 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
SRGAP1-205ENST00000542841 USPL1Q5W0Q7 1092 aa15.37■□□□□ 0.05
SRGAP1-205ENST00000542841 CCDC184Q52MB2 194 aa15.36■□□□□ 0.05
SRGAP1-205ENST00000542841 CNGB1Q14028 1251 aaPredicted RBP15.35■□□□□ 0.05
SRGAP1-205ENST00000542841 TTLL6Q8N841 843 aa15.35■□□□□ 0.05
SRGAP1-205ENST00000542841 PNISRQ8TF01 805 aaKnown RBP15.35■□□□□ 0.05
SRGAP1-205ENST00000542841 TJP1Q07157 1748 aa15.34■□□□□ 0.05
SRGAP1-205ENST00000542841 NFIXQ14938 502 aa15.34■□□□□ 0.05
SRGAP1-205ENST00000542841 AEBP1Q8IUX7 1158 aa15.34■□□□□ 0.05
SRGAP1-205ENST00000542841 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
SRGAP1-205ENST00000542841 SOS1Q07889 1333 aaPredicted RBP15.34■□□□□ 0.05
SRGAP1-205ENST00000542841 ADAMTS7Q9UKP4 1686 aa15.33■□□□□ 0.04
SRGAP1-205ENST00000542841 SULT6B1Q6IMI4 303 aa15.33■□□□□ 0.04
SRGAP1-205ENST00000542841 DPY19L2Q6NUT2 758 aa15.33■□□□□ 0.04
SRGAP1-205ENST00000542841 NARFQ9UHQ1 456 aa15.33■□□□□ 0.04
SRGAP1-205ENST00000542841 H0YIN7 160 aa15.32■□□□□ 0.04
SRGAP1-205ENST00000542841 SERPINB2P05120 415 aa15.32■□□□□ 0.04
SRGAP1-205ENST00000542841 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
SRGAP1-205ENST00000542841 YTHDC1Q96MU7 727 aaKnown RBP15.32■□□□□ 0.04
SRGAP1-205ENST00000542841 CYP19A1P11511 503 aaPredicted RBP15.31■□□□□ 0.04
SRGAP1-205ENST00000542841 AKAP4Q5JQC9 854 aa15.31■□□□□ 0.04
SRGAP1-205ENST00000542841 SLC52A2Q9HAB3 445 aa15.31■□□□□ 0.04
SRGAP1-205ENST00000542841 COL15A1P39059 1388 aa15.31■□□□□ 0.04
SRGAP1-205ENST00000542841 NFKBIEO00221 500 aa15.3■□□□□ 0.04
SRGAP1-205ENST00000542841 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 NRXN2Q9P2S2 1712 aa15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 POTECB2RU33 542 aa15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 FAM9BQ8IZU0 186 aa15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 CFAP53Q96M91 514 aa15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 BCL2L12Q9HB09 334 aa15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 DLEC1Q9Y238 1755 aa15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 TIAM2Q8IVF5 1701 aa15.29■□□□□ 0.04
SRGAP1-205ENST00000542841 SLC39A6Q13433 755 aa15.28■□□□□ 0.04
SRGAP1-205ENST00000542841 LGR6Q9HBX8 967 aa15.28■□□□□ 0.04
SRGAP1-205ENST00000542841 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
SRGAP1-205ENST00000542841 SCN11AQ9UI33 1791 aa15.28■□□□□ 0.04
SRGAP1-205ENST00000542841 ERFEQ4G0M1 354 aa15.27■□□□□ 0.04
SRGAP1-205ENST00000542841 VSIG10Q8N0Z9 540 aa15.27■□□□□ 0.04
SRGAP1-205ENST00000542841 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
SRGAP1-205ENST00000542841 IL13P35225 146 aa15.26■□□□□ 0.03
SRGAP1-205ENST00000542841 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
SRGAP1-205ENST00000542841 BICDL1Q6ZP65 573 aa15.26■□□□□ 0.03
SRGAP1-205ENST00000542841 ZNF622Q969S3 477 aaKnown RBP eCLIP15.26■□□□□ 0.03
SRGAP1-205ENST00000542841 MKRN1Q9UHC7 482 aaKnown RBP15.26■□□□□ 0.03
SRGAP1-205ENST00000542841 PDZRN3Q9UPQ7 1066 aa15.26■□□□□ 0.03
SRGAP1-205ENST00000542841 CARMIL3Q8ND23 1372 aa15.25■□□□□ 0.03
SRGAP1-205ENST00000542841 RNMTO43148 476 aaKnown RBP15.25■□□□□ 0.03
SRGAP1-205ENST00000542841 C21orf2O43822 256 aa15.25■□□□□ 0.03
SRGAP1-205ENST00000542841 PDE6BP35913 854 aa15.25■□□□□ 0.03
SRGAP1-205ENST00000542841 WDR43Q15061 677 aaKnown RBP eCLIP15.25■□□□□ 0.03
SRGAP1-205ENST00000542841 ZNF219Q9P2Y4 722 aaPredicted RBP15.25■□□□□ 0.03
SRGAP1-205ENST00000542841 CCDC88AQ3V6T2 1871 aa15.25■□□□□ 0.03
SRGAP1-205ENST00000542841 A0A087WZG4 1122 aa15.24■□□□□ 0.03
SRGAP1-205ENST00000542841 BRIP1Q9BX63 1249 aa15.24■□□□□ 0.03
SRGAP1-205ENST00000542841 MRC1P22897 1456 aa15.24■□□□□ 0.03
SRGAP1-205ENST00000542841 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
SRGAP1-205ENST00000542841 COL3A1P02461 1466 aaPredicted RBP15.23■□□□□ 0.03
SRGAP1-205ENST00000542841 STARD3NLO95772 234 aa15.23■□□□□ 0.03
SRGAP1-205ENST00000542841 HNRNPUQ00839 825 aaKnown RBP eCLIP15.23■□□□□ 0.03
SRGAP1-205ENST00000542841 TAOK3Q9H2K8 898 aa15.23■□□□□ 0.03
SRGAP1-205ENST00000542841 EIF5P55010 431 aaKnown RBP15.22■□□□□ 0.03
SRGAP1-205ENST00000542841 TBC1D9BQ66K14 1250 aa15.22■□□□□ 0.03
SRGAP1-205ENST00000542841 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.03
SRGAP1-205ENST00000542841 FOXN1O15353 648 aa15.21■□□□□ 0.03
SRGAP1-205ENST00000542841 DDNO94850 711 aaPredicted RBP15.21■□□□□ 0.03
SRGAP1-205ENST00000542841 POTEIP0CG38 1075 aa15.21■□□□□ 0.03
SRGAP1-205ENST00000542841 POTEJP0CG39 1038 aa15.21■□□□□ 0.03
SRGAP1-205ENST00000542841 TTC5Q8N0Z6 440 aa15.21■□□□□ 0.03
SRGAP1-205ENST00000542841 PRDM10Q9NQV6 1147 aa15.21■□□□□ 0.03
SRGAP1-205ENST00000542841 CNTNAP1P78357 1384 aa15.21■□□□□ 0.02
SRGAP1-205ENST00000542841 IQCA1LA6NCM1 817 aa15.2■□□□□ 0.02
SRGAP1-205ENST00000542841 NPHP1O15259 732 aa15.2■□□□□ 0.02
SRGAP1-205ENST00000542841 HMOX1P09601 288 aa15.2■□□□□ 0.02
SRGAP1-205ENST00000542841 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
SRGAP1-205ENST00000542841 PRR5LQ6MZQ0 368 aa15.2■□□□□ 0.02
SRGAP1-205ENST00000542841 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
SRGAP1-205ENST00000542841 CNKSR1Q969H4 720 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms