RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 MCM10Q7L590 875 aa23.16■■□□□ 1.3
LTBR-210ENST00000542830 COL15A1P39059 1388 aa23.15■■□□□ 1.3
LTBR-210ENST00000542830 TGFB2P61812 414 aa23.14■■□□□ 1.29
LTBR-210ENST00000542830 FKBP8Q14318 412 aa23.14■■□□□ 1.29
LTBR-210ENST00000542830 PLEKHF1Q96S99 279 aa23.14■■□□□ 1.29
LTBR-210ENST00000542830 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
LTBR-210ENST00000542830 C10orf71Q711Q0 1435 aa23.14■■□□□ 1.29
LTBR-210ENST00000542830 MYBBP1AQ9BQG0 1328 aaKnown RBP23.13■■□□□ 1.29
LTBR-210ENST00000542830 CANXP27824 592 aaKnown RBP23.13■■□□□ 1.29
LTBR-210ENST00000542830 MAPK8IP3Q9UPT6 1336 aa23.12■■□□□ 1.29
LTBR-210ENST00000542830 A0A087WZG4 1122 aa23.12■■□□□ 1.29
LTBR-210ENST00000542830 USPL1Q5W0Q7 1092 aa23.12■■□□□ 1.29
LTBR-210ENST00000542830 KIF13BQ9NQT8 1826 aa23.12■■□□□ 1.29
LTBR-210ENST00000542830 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
LTBR-210ENST00000542830 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
LTBR-210ENST00000542830 DCTN1Q14203 1278 aa23.11■■□□□ 1.29
LTBR-210ENST00000542830 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
LTBR-210ENST00000542830 KCNQ3O43525 872 aa23.1■■□□□ 1.29
LTBR-210ENST00000542830 TAF7Q15545 349 aaPredicted RBP23.1■■□□□ 1.29
LTBR-210ENST00000542830 TM4SF1P30408 202 aa23.09■■□□□ 1.29
LTBR-210ENST00000542830 PXDNLA1KZ92 1463 aa23.09■■□□□ 1.29
LTBR-210ENST00000542830 IL6STP40189 918 aaPredicted RBP23.08■■□□□ 1.29
LTBR-210ENST00000542830 DDR1Q08345 913 aa23.08■■□□□ 1.29
LTBR-210ENST00000542830 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
LTBR-210ENST00000542830 ZNF784Q8NCA9 323 aaPredicted RBP23.08■■□□□ 1.29
LTBR-210ENST00000542830 PNISRQ8TF01 805 aaKnown RBP23.08■■□□□ 1.29
LTBR-210ENST00000542830 POLRMTO00411 1230 aaKnown RBP23.07■■□□□ 1.28
LTBR-210ENST00000542830 SNRPA1P09661 255 aaKnown RBP23.07■■□□□ 1.28
LTBR-210ENST00000542830 NFIXQ14938 502 aa23.05■■□□□ 1.28
LTBR-210ENST00000542830 DLG5Q8TDM6 1919 aa23.05■■□□□ 1.28
LTBR-210ENST00000542830 A0A0G2JLW4 131 aa23.04■■□□□ 1.28
LTBR-210ENST00000542830 A1BGP04217 495 aa23.04■■□□□ 1.28
LTBR-210ENST00000542830 BCL2L12Q9HB09 334 aa23.04■■□□□ 1.28
LTBR-210ENST00000542830 WWC3Q9ULE0 1092 aa23.04■■□□□ 1.28
LTBR-210ENST00000542830 ZNF330Q9Y3S2 320 aaPredicted RBP23.04■■□□□ 1.28
LTBR-210ENST00000542830 USP16Q9Y5T5 823 aa23.04■■□□□ 1.28
LTBR-210ENST00000542830 KIAA1551Q9HCM1 1747 aa23.03■■□□□ 1.28
LTBR-210ENST00000542830 DPEP1P16444 411 aa23.03■■□□□ 1.28
LTBR-210ENST00000542830 PRKRIP1Q9H875 184 aaPredicted RBP23.02■■□□□ 1.28
LTBR-210ENST00000542830 N4BP2Q86UW6 1770 aaPredicted RBP23.01■■□□□ 1.27
LTBR-210ENST00000542830 LMOD3Q0VAK6 560 aa23.01■■□□□ 1.27
LTBR-210ENST00000542830 WDR43Q15061 677 aaKnown RBP eCLIP23.01■■□□□ 1.27
LTBR-210ENST00000542830 BCS1LQ9Y276 419 aa23.01■■□□□ 1.27
LTBR-210ENST00000542830 RIPK4P57078 832 aa23■■□□□ 1.27
LTBR-210ENST00000542830 MIS18AQ9NYP9 233 aa23■■□□□ 1.27
LTBR-210ENST00000542830 TBC1D2BQ9UPU7 963 aa23■■□□□ 1.27
LTBR-210ENST00000542830 PRAMEF22A3QJZ6 481 aa22.99■■□□□ 1.27
LTBR-210ENST00000542830 SERPINB2P05120 415 aa22.99■■□□□ 1.27
LTBR-210ENST00000542830 PIM2Q9P1W9 311 aa22.99■■□□□ 1.27
LTBR-210ENST00000542830 SCN7AQ01118 1682 aa22.98■■□□□ 1.27
LTBR-210ENST00000542830 KCNA3P22001 575 aa22.98■■□□□ 1.27
LTBR-210ENST00000542830 TMPOP42166 694 aaKnown RBP22.98■■□□□ 1.27
LTBR-210ENST00000542830 THUMPD2Q9BTF0 503 aaKnown RBP22.98■■□□□ 1.27
LTBR-210ENST00000542830 BICDL1Q6ZP65 573 aa22.97■■□□□ 1.27
LTBR-210ENST00000542830 DZIP3Q86Y13 1208 aaKnown RBP22.97■■□□□ 1.27
LTBR-210ENST00000542830 NRXN2Q9P2S2 1712 aa22.96■■□□□ 1.27
LTBR-210ENST00000542830 KDM3BQ7LBC6 1761 aa22.96■■□□□ 1.27
LTBR-210ENST00000542830 CAMTA2O94983 1202 aa22.96■■□□□ 1.27
LTBR-210ENST00000542830 TBC1D9BQ66K14 1250 aa22.96■■□□□ 1.27
LTBR-210ENST00000542830 AFDNP55196 1824 aaKnown RBP22.96■■□□□ 1.27
LTBR-210ENST00000542830 GIGYF1O75420 1035 aaPredicted RBP22.95■■□□□ 1.26
LTBR-210ENST00000542830 BRCA1P38398 1863 aaKnown RBP22.95■■□□□ 1.26
LTBR-210ENST00000542830 EIF4A1P60842 406 aaKnown RBP22.95■■□□□ 1.26
LTBR-210ENST00000542830 CARMIL3Q8ND23 1372 aa22.95■■□□□ 1.26
LTBR-210ENST00000542830 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
LTBR-210ENST00000542830 BABAM1Q9NWV8 329 aa22.95■■□□□ 1.26
LTBR-210ENST00000542830 RGL2O15211 777 aa22.94■■□□□ 1.26
LTBR-210ENST00000542830 PIP4K2AP48426 406 aaPredicted RBP22.94■■□□□ 1.26
LTBR-210ENST00000542830 DALRD3Q5D0E6 543 aaKnown RBP22.94■■□□□ 1.26
LTBR-210ENST00000542830 TSPYL4Q9UJ04 414 aa22.94■■□□□ 1.26
LTBR-210ENST00000542830 ZNF652Q9Y2D9 606 aa22.94■■□□□ 1.26
LTBR-210ENST00000542830 CHRNA5P30532 468 aa22.93■■□□□ 1.26
LTBR-210ENST00000542830 CLEC4GQ6UXB4 293 aa22.93■■□□□ 1.26
LTBR-210ENST00000542830 CCDC146Q8IYE0 955 aa22.93■■□□□ 1.26
LTBR-210ENST00000542830 SETDB2Q96T68 719 aa22.93■■□□□ 1.26
LTBR-210ENST00000542830 LAMB4A4D0S4 1761 aa22.92■■□□□ 1.26
LTBR-210ENST00000542830 NBPF26B4DH59 902 aa22.92■■□□□ 1.26
LTBR-210ENST00000542830 NBPF10Q6P3W6 841 aaKnown RBP22.92■■□□□ 1.26
LTBR-210ENST00000542830 NBPF15Q8N660 670 aa22.92■■□□□ 1.26
LTBR-210ENST00000542830 ADAMTS8Q9UP79 889 aa22.92■■□□□ 1.26
LTBR-210ENST00000542830 ADCY9O60503 1353 aa22.91■■□□□ 1.26
LTBR-210ENST00000542830 PDZRN3Q9UPQ7 1066 aa22.91■■□□□ 1.26
LTBR-210ENST00000542830 BCORQ6W2J9 1755 aa22.91■■□□□ 1.26
LTBR-210ENST00000542830 ARHGAP27Q6ZUM4 889 aa22.9■■□□□ 1.26
LTBR-210ENST00000542830 RRP7AQ9Y3A4 280 aaKnown RBP22.9■■□□□ 1.26
LTBR-210ENST00000542830 ATP10DQ9P241 1426 aa22.9■■□□□ 1.26
LTBR-210ENST00000542830 ARFGEF1Q9Y6D6 1849 aa22.89■■□□□ 1.26
LTBR-210ENST00000542830 NEUROD2Q15784 382 aa22.89■■□□□ 1.25
LTBR-210ENST00000542830 BRIP1Q9BX63 1249 aa22.89■■□□□ 1.25
LTBR-210ENST00000542830 H0YIN7 160 aa22.88■■□□□ 1.25
LTBR-210ENST00000542830 NPHP1O15259 732 aa22.88■■□□□ 1.25
LTBR-210ENST00000542830 PDE6BP35913 854 aa22.88■■□□□ 1.25
LTBR-210ENST00000542830 PRR5LQ6MZQ0 368 aa22.88■■□□□ 1.25
LTBR-210ENST00000542830 C2CD5Q86YS7 1000 aa22.88■■□□□ 1.25
LTBR-210ENST00000542830 CNBD1Q8NA66 436 aa22.88■■□□□ 1.25
LTBR-210ENST00000542830 ERBB4Q15303 1308 aa22.87■■□□□ 1.25
LTBR-210ENST00000542830 ST5P78524 1137 aa22.86■■□□□ 1.25
LTBR-210ENST00000542830 ZNF316A6NFI3 1004 aaPredicted RBP22.85■■□□□ 1.25
LTBR-210ENST00000542830 TTLL6Q8N841 843 aa22.85■■□□□ 1.25
LTBR-210ENST00000542830 TRIM35Q9UPQ4 493 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms