RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
NELFA-216ENST00000542778 ARHGEF25Q86VW2 580 aa20.68■□□□□ 0.9
NELFA-216ENST00000542778 CHL1O00533 1208 aa20.68■□□□□ 0.9
NELFA-216ENST00000542778 MBD3O95983 291 aa20.68■□□□□ 0.9
NELFA-216ENST00000542778 GSPT1P15170 499 aaKnown RBP20.68■□□□□ 0.9
NELFA-216ENST00000542778 MRPL50Q8N5N7 158 aaKnown RBP20.68■□□□□ 0.9
NELFA-216ENST00000542778 KCNH5Q8NCM2 988 aa20.67■□□□□ 0.9
NELFA-216ENST00000542778 TSPY26PQ9H489 355 aa20.67■□□□□ 0.9
NELFA-216ENST00000542778 USP26Q9BXU7 913 aa20.67■□□□□ 0.9
NELFA-216ENST00000542778 KIF24Q5T7B8 1368 aa20.66■□□□□ 0.9
NELFA-216ENST00000542778 MED1Q15648 1581 aaPredicted RBP20.66■□□□□ 0.9
NELFA-216ENST00000542778 ZBTB7BO15156 539 aaPredicted RBP20.66■□□□□ 0.9
NELFA-216ENST00000542778 NOLC1Q14978 699 aaKnown RBP eCLIP20.66■□□□□ 0.9
NELFA-216ENST00000542778 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
NELFA-216ENST00000542778 KIF1AQ12756 1690 aa20.66■□□□□ 0.9
NELFA-216ENST00000542778 ALDH1L2Q3SY69 923 aa20.66■□□□□ 0.9
NELFA-216ENST00000542778 BBXQ8WY36 941 aaPredicted RBP20.66■□□□□ 0.9
NELFA-216ENST00000542778 KIF3AQ9Y496 699 aa20.66■□□□□ 0.9
NELFA-216ENST00000542778 SLIT3O75094 1523 aa20.66■□□□□ 0.9
NELFA-216ENST00000542778 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
NELFA-216ENST00000542778 MSH6P52701 1360 aa20.66■□□□□ 0.9
NELFA-216ENST00000542778 ALS2Q96Q42 1657 aa20.65■□□□□ 0.9
NELFA-216ENST00000542778 RTF1Q92541 710 aaKnown RBP20.65■□□□□ 0.9
NELFA-216ENST00000542778 GTF2E1P29083 439 aaPredicted RBP20.64■□□□□ 0.9
NELFA-216ENST00000542778 SIRT2Q8IXJ6 389 aa20.64■□□□□ 0.9
NELFA-216ENST00000542778 IL17REQ8NFR9 667 aa20.64■□□□□ 0.9
NELFA-216ENST00000542778 FAM177BA6PVY3 158 aa20.64■□□□□ 0.89
NELFA-216ENST00000542778 CADPS2Q86UW7 1296 aa20.64■□□□□ 0.89
NELFA-216ENST00000542778 BCL2L12Q9HB09 334 aa20.63■□□□□ 0.89
NELFA-216ENST00000542778 ST18O60284 1047 aa20.63■□□□□ 0.89
NELFA-216ENST00000542778 ZNF830Q96NB3 372 aaPredicted RBP20.63■□□□□ 0.89
NELFA-216ENST00000542778 ANKRD24Q8TF21 1146 aa20.62■□□□□ 0.89
NELFA-216ENST00000542778 GNAT3A8MTJ3 354 aa20.61■□□□□ 0.89
NELFA-216ENST00000542778 FKBP5Q13451 457 aaPredicted RBP20.61■□□□□ 0.89
NELFA-216ENST00000542778 PLEKHM2Q8IWE5 1019 aa20.61■□□□□ 0.89
NELFA-216ENST00000542778 SPTLC3Q9NUV7 552 aa20.61■□□□□ 0.89
NELFA-216ENST00000542778 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
NELFA-216ENST00000542778 CHRNA2Q15822 529 aa20.61■□□□□ 0.89
NELFA-216ENST00000542778 BRINP3Q76B58 766 aa20.61■□□□□ 0.89
NELFA-216ENST00000542778 MPNDQ8N594 471 aa20.61■□□□□ 0.89
NELFA-216ENST00000542778 CHMP4BQ9H444 224 aaKnown RBP20.61■□□□□ 0.89
NELFA-216ENST00000542778 C17orf53Q8N3J3 647 aaPredicted RBP20.6■□□□□ 0.89
NELFA-216ENST00000542778 LGR6Q9HBX8 967 aa20.6■□□□□ 0.89
NELFA-216ENST00000542778 DCCP43146 1447 aa20.6■□□□□ 0.89
NELFA-216ENST00000542778 PDE4CQ08493 712 aa20.6■□□□□ 0.89
NELFA-216ENST00000542778 FOXD4L5Q5VV16 416 aaPredicted RBP20.6■□□□□ 0.89
NELFA-216ENST00000542778 PDCL2Q8N4E4 241 aa20.6■□□□□ 0.89
NELFA-216ENST00000542778 FOXD4L4Q8WXT5 416 aaPredicted RBP20.6■□□□□ 0.89
NELFA-216ENST00000542778 SPDYE4A6NLX3 237 aa20.59■□□□□ 0.89
NELFA-216ENST00000542778 BRPF1P55201 1214 aaPredicted RBP20.59■□□□□ 0.89
NELFA-216ENST00000542778 PHRF1Q9P1Y6 1649 aaKnown RBP20.59■□□□□ 0.89
NELFA-216ENST00000542778 TTC22Q5TAA0 569 aa20.59■□□□□ 0.89
NELFA-216ENST00000542778 NECTIN2Q92692 538 aa20.58■□□□□ 0.89
NELFA-216ENST00000542778 TTC12Q9H892 705 aaPredicted RBP20.58■□□□□ 0.89
NELFA-216ENST00000542778 MAP3K5Q99683 1374 aa20.58■□□□□ 0.88
NELFA-216ENST00000542778 INTS3Q68E01 1043 aaKnown RBP20.58■□□□□ 0.88
NELFA-216ENST00000542778 SYAP1Q96A49 352 aaPredicted RBP20.58■□□□□ 0.88
NELFA-216ENST00000542778 PXDNQ92626 1479 aa20.57■□□□□ 0.88
NELFA-216ENST00000542778 UVSSAQ2YD98 709 aa20.57■□□□□ 0.88
NELFA-216ENST00000542778 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
NELFA-216ENST00000542778 FAM184AQ8NB25 1140 aa20.55■□□□□ 0.88
NELFA-216ENST00000542778 ZNF428Q96B54 188 aa20.55■□□□□ 0.88
NELFA-216ENST00000542778 USP25Q9UHP3 1055 aa20.55■□□□□ 0.88
NELFA-216ENST00000542778 LRRC37A3O60309 1634 aa20.55■□□□□ 0.88
NELFA-216ENST00000542778 BRD1O95696 1058 aa20.55■□□□□ 0.88
NELFA-216ENST00000542778 ANKRD7Q92527 254 aa20.55■□□□□ 0.88
NELFA-216ENST00000542778 MPRIPQ6WCQ1 1025 aa20.54■□□□□ 0.88
NELFA-216ENST00000542778 G2E3Q7L622 706 aa20.54■□□□□ 0.88
NELFA-216ENST00000542778 PHF14O94880 888 aa20.54■□□□□ 0.88
NELFA-216ENST00000542778 U2AF2P26368 475 aaKnown RBP eCLIP20.54■□□□□ 0.88
NELFA-216ENST00000542778 TAF3Q5VWG9 929 aa20.54■□□□□ 0.88
NELFA-216ENST00000542778 SLAIN2Q9P270 581 aa20.54■□□□□ 0.88
NELFA-216ENST00000542778 ERBB3P21860 1342 aa20.54■□□□□ 0.88
NELFA-216ENST00000542778 ARHGAP45Q92619 1136 aa20.53■□□□□ 0.88
NELFA-216ENST00000542778 TMEM51Q9NW97 253 aa20.53■□□□□ 0.88
NELFA-216ENST00000542778 TNS3Q68CZ2 1445 aa20.53■□□□□ 0.88
NELFA-216ENST00000542778 SPATA31A3Q5VYP0 1347 aa20.53■□□□□ 0.88
NELFA-216ENST00000542778 KCNQ3O43525 872 aa20.52■□□□□ 0.88
NELFA-216ENST00000542778 ADCY5O95622 1261 aa20.52■□□□□ 0.88
NELFA-216ENST00000542778 ZNF530Q6P9A1 599 aaPredicted RBP20.52■□□□□ 0.88
NELFA-216ENST00000542778 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
NELFA-216ENST00000542778 ABCC4O15439 1325 aa20.52■□□□□ 0.88
NELFA-216ENST00000542778 KIAA0232Q92628 1395 aa20.52■□□□□ 0.87
NELFA-216ENST00000542778 RGS12O14924 1447 aa20.51■□□□□ 0.87
NELFA-216ENST00000542778 IGSF3O75054 1194 aa20.51■□□□□ 0.87
NELFA-216ENST00000542778 RIOK3O14730 519 aaKnown RBP20.5■□□□□ 0.87
NELFA-216ENST00000542778 C16orf71Q8IYS4 520 aaPredicted RBP20.5■□□□□ 0.87
NELFA-216ENST00000542778 TMX3Q96JJ7 454 aa20.5■□□□□ 0.87
NELFA-216ENST00000542778 NLRP2Q9NX02 1062 aa20.5■□□□□ 0.87
NELFA-216ENST00000542778 DIAPH3Q9NSV4 1193 aa20.5■□□□□ 0.87
NELFA-216ENST00000542778 HTATSF1O43719 755 aaKnown RBP20.49■□□□□ 0.87
NELFA-216ENST00000542778 GADD45BO75293 160 aaPredicted RBP20.49■□□□□ 0.87
NELFA-216ENST00000542778 SDSP20132 328 aa20.49■□□□□ 0.87
NELFA-216ENST00000542778 COL18A1P39060 1754 aa20.49■□□□□ 0.87
NELFA-216ENST00000542778 DCTPP1Q9H773 170 aa20.49■□□□□ 0.87
NELFA-216ENST00000542778 CRYBG1Q9Y4K1 1723 aa20.49■□□□□ 0.87
NELFA-216ENST00000542778 F6X3S4 739 aa20.49■□□□□ 0.87
NELFA-216ENST00000542778 CTIFO43310 598 aaKnown RBP20.49■□□□□ 0.87
NELFA-216ENST00000542778 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
NELFA-216ENST00000542778 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms