RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 ATXN7O15265 892 aaPredicted RBP5.57□□□□□ -1.52
KNTC1-213ENST00000542727 STAU1O95793 577 aaKnown RBP5.57□□□□□ -1.52
KNTC1-213ENST00000542727 AMPD1P23109 780 aa5.57□□□□□ -1.52
KNTC1-213ENST00000542727 AIDAQ96BJ3 306 aa5.57□□□□□ -1.52
KNTC1-213ENST00000542727 RRAGCQ9HB90 399 aa5.57□□□□□ -1.52
KNTC1-213ENST00000542727 GGA1Q9UJY5 639 aa5.57□□□□□ -1.52
KNTC1-213ENST00000542727 NOD1Q9Y239 953 aa5.57□□□□□ -1.52
KNTC1-213ENST00000542727 TMEM229AB2RXF0 380 aa5.56□□□□□ -1.52
KNTC1-213ENST00000542727 GNB5O14775 395 aa5.56□□□□□ -1.52
KNTC1-213ENST00000542727 FAM157BP0CG42 384 aa5.56□□□□□ -1.52
KNTC1-213ENST00000542727 EPXP11678 715 aa5.56□□□□□ -1.52
KNTC1-213ENST00000542727 SNRPNP63162 240 aaKnown RBP5.56□□□□□ -1.52
KNTC1-213ENST00000542727 ARSJQ5FYB0 599 aaPredicted RBP5.56□□□□□ -1.52
KNTC1-213ENST00000542727 SAMD5Q5TGI4 173 aa5.56□□□□□ -1.52
KNTC1-213ENST00000542727 C1orf229Q6ZS94 237 aaPredicted RBP5.56□□□□□ -1.52
KNTC1-213ENST00000542727 ZCCHC2Q9C0B9 1178 aaKnown RBP5.56□□□□□ -1.52
KNTC1-213ENST00000542727 NOP53Q9NZM5 478 aaKnown RBP5.56□□□□□ -1.52
KNTC1-213ENST00000542727 IQSEC3Q9UPP2 1182 aaPredicted RBP5.56□□□□□ -1.52
KNTC1-213ENST00000542727 GPC6Q9Y625 555 aaPredicted RBP5.56□□□□□ -1.52
KNTC1-213ENST00000542727 A0A1W2PNR3 127 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 C2CD2LO14523 706 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 PROCP04070 461 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 ADH6P28332 368 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 CTBSQ01459 385 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 LAMC2Q13753 1193 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 ZNF295-AS1Q8N0V1 137 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 CABP1Q9NZU7 370 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 COG6Q9Y2V7 657 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 PCDHGA11Q9Y5H2 935 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 GJA3Q9Y6H8 435 aa5.55□□□□□ -1.52
KNTC1-213ENST00000542727 RAD21O60216 631 aa5.54□□□□□ -1.52
KNTC1-213ENST00000542727 ITGB2P05107 769 aa5.54□□□□□ -1.52
KNTC1-213ENST00000542727 MAPTP10636 758 aaKnown RBP5.54□□□□□ -1.52
KNTC1-213ENST00000542727 SKIP12755 728 aa5.54□□□□□ -1.52
KNTC1-213ENST00000542727 TNP2Q05952 138 aa5.54□□□□□ -1.52
KNTC1-213ENST00000542727 TRIM50Q86XT4 487 aa5.54□□□□□ -1.52
KNTC1-213ENST00000542727 ALG2Q9H553 416 aa5.54□□□□□ -1.52
KNTC1-213ENST00000542727 SERTAD1Q9UHV2 236 aa5.54□□□□□ -1.52
KNTC1-213ENST00000542727 DCDC2BA2VCK2 349 aa5.53□□□□□ -1.52
KNTC1-213ENST00000542727 ADAM23O75077 832 aa5.53□□□□□ -1.52
KNTC1-213ENST00000542727 DGKGP49619 791 aa5.53□□□□□ -1.52
KNTC1-213ENST00000542727 GTF2IP78347 998 aa5.53□□□□□ -1.52
KNTC1-213ENST00000542727 FLIIQ13045 1269 aa5.53□□□□□ -1.52
KNTC1-213ENST00000542727 LINC00114Q6XXX2 140 aa5.53□□□□□ -1.52
KNTC1-213ENST00000542727 BTBD6Q96KE9 485 aa5.53□□□□□ -1.52
KNTC1-213ENST00000542727 ZIC5Q96T25 663 aa5.53□□□□□ -1.52
KNTC1-213ENST00000542727 SCHIP1Q9P0W5 487 aaPredicted RBP5.53□□□□□ -1.52
KNTC1-213ENST00000542727 KRBA1A5PL33 1030 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 NEURL1BA8MQ27 555 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 PIK3CDO00329 1044 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 KHNYNO15037 678 aaKnown RBP5.52□□□□□ -1.53
KNTC1-213ENST00000542727 HOXB4P17483 251 aaPredicted RBP5.52□□□□□ -1.53
KNTC1-213ENST00000542727 ATP1A2P50993 1020 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 PSME1Q06323 249 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 NCOA4Q13772 614 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 TEAD4Q15561 434 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 ZNF468Q5VIY5 522 aaPredicted RBP5.52□□□□□ -1.53
KNTC1-213ENST00000542727 BICDL1Q6ZP65 573 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 CHSY3Q70JA7 882 aa5.52□□□□□ -1.53
KNTC1-213ENST00000542727 USP17L5A8MUK1 530 aa5.51□□□□□ -1.53
KNTC1-213ENST00000542727 EFSO43281 561 aa5.51□□□□□ -1.53
KNTC1-213ENST00000542727 COL8A1P27658 744 aa5.51□□□□□ -1.53
KNTC1-213ENST00000542727 GRIN2CQ14957 1233 aa5.51□□□□□ -1.53
KNTC1-213ENST00000542727 PLEKHM2Q8IWE5 1019 aa5.51□□□□□ -1.53
KNTC1-213ENST00000542727 ZNF358Q9NW07 568 aa5.51□□□□□ -1.53
KNTC1-213ENST00000542727 MARK1Q9P0L2 795 aa5.51□□□□□ -1.53
KNTC1-213ENST00000542727 CD33P20138 364 aa5.5□□□□□ -1.53
KNTC1-213ENST00000542727 NOS2P35228 1153 aa5.5□□□□□ -1.53
KNTC1-213ENST00000542727 EPHA4P54764 986 aa5.5□□□□□ -1.53
KNTC1-213ENST00000542727 L3MBTL2Q969R5 705 aa5.5□□□□□ -1.53
KNTC1-213ENST00000542727 PRR12Q9ULL5 1215 aa5.5□□□□□ -1.53
KNTC1-213ENST00000542727 CHMP3Q9Y3E7 222 aa5.5□□□□□ -1.53
KNTC1-213ENST00000542727 USP3Q9Y6I4 520 aa5.5□□□□□ -1.53
KNTC1-213ENST00000542727 SPDYE3A6NKU9 549 aa5.49□□□□□ -1.53
KNTC1-213ENST00000542727 K7ELQ4 463 aaPredicted RBP5.49□□□□□ -1.53
KNTC1-213ENST00000542727 M0R2N6 131 aa5.49□□□□□ -1.53
KNTC1-213ENST00000542727 EML1O00423 815 aa5.49□□□□□ -1.53
KNTC1-213ENST00000542727 UBTFP17480 764 aaKnown RBP5.49□□□□□ -1.53
KNTC1-213ENST00000542727 ALAS2P22557 587 aa5.49□□□□□ -1.53
KNTC1-213ENST00000542727 BAG6P46379 1132 aa5.49□□□□□ -1.53
KNTC1-213ENST00000542727 FCHSD1Q86WN1 690 aa5.49□□□□□ -1.53
KNTC1-213ENST00000542727 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.49□□□□□ -1.53
KNTC1-213ENST00000542727 NEUROD4Q9HD90 331 aa5.49□□□□□ -1.53
KNTC1-213ENST00000542727 ELOA3CA0A087WX78 387 aaPredicted RBP5.48□□□□□ -1.53
KNTC1-213ENST00000542727 SERTM1A2A2V5 107 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 ELOA3DA6NLF2 546 aaPredicted RBP5.48□□□□□ -1.53
KNTC1-213ENST00000542727 SIN3BO75182 1162 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 TXLNAP40222 546 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 HIRAP54198 1017 aaPredicted RBP5.48□□□□□ -1.53
KNTC1-213ENST00000542727 PSMA6P60900 246 aaKnown RBP5.48□□□□□ -1.53
KNTC1-213ENST00000542727 NEUROD1Q13562 356 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 ELOA3BQ3SY89 546 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 C1orf53Q5VUE5 145 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 SLC9A9Q8IVB4 645 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 ELOA3Q8NG57 546 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 ZDHHC1Q8WTX9 485 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 SUV39H2Q9H5I1 410 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 ZNF232Q9UNY5 417 aa5.48□□□□□ -1.53
KNTC1-213ENST00000542727 USP17L3A6NCW0 530 aa5.47□□□□□ -1.53
KNTC1-213ENST00000542727 USP17L4A6NCW7 530 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms