RNA–Protein interactions for RNA: ENST00000542491.2

AC140847.3-201, humanhuman

BASIC

Gene AC140847.3, Length 708 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC140847.3-201ENST00000542491 BCS1LQ9Y276 419 aa13□□□□□ -0.33
AC140847.3-201ENST00000542491 KDM6AO15550 1401 aaPredicted RBP12.99□□□□□ -0.33
AC140847.3-201ENST00000542491 A0A087WZG4 1122 aa12.99□□□□□ -0.33
AC140847.3-201ENST00000542491 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
AC140847.3-201ENST00000542491 ZNF790Q6PG37 636 aa12.99□□□□□ -0.33
AC140847.3-201ENST00000542491 PHACTR3Q96KR7 559 aa12.99□□□□□ -0.33
AC140847.3-201ENST00000542491 LGR6Q9HBX8 967 aa12.99□□□□□ -0.33
AC140847.3-201ENST00000542491 ADAMTS8Q9UP79 889 aa12.99□□□□□ -0.33
AC140847.3-201ENST00000542491 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
AC140847.3-201ENST00000542491 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
AC140847.3-201ENST00000542491 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
AC140847.3-201ENST00000542491 TMPOP42166 694 aaKnown RBP12.98□□□□□ -0.33
AC140847.3-201ENST00000542491 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
AC140847.3-201ENST00000542491 PLEKHF1Q96S99 279 aa12.98□□□□□ -0.33
AC140847.3-201ENST00000542491 WDR90Q96KV7 1748 aa12.98□□□□□ -0.33
AC140847.3-201ENST00000542491 CNTNAP4Q9C0A0 1308 aa12.97□□□□□ -0.33
AC140847.3-201ENST00000542491 CCER2I3L3R5 266 aa12.97□□□□□ -0.33
AC140847.3-201ENST00000542491 RFC4P35249 363 aa12.97□□□□□ -0.33
AC140847.3-201ENST00000542491 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
AC140847.3-201ENST00000542491 MRC1P22897 1456 aa12.97□□□□□ -0.33
AC140847.3-201ENST00000542491 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
AC140847.3-201ENST00000542491 TGFB2P61812 414 aa12.96□□□□□ -0.33
AC140847.3-201ENST00000542491 HTRA3P83110 453 aa12.96□□□□□ -0.33
AC140847.3-201ENST00000542491 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
AC140847.3-201ENST00000542491 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.33
AC140847.3-201ENST00000542491 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
AC140847.3-201ENST00000542491 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
AC140847.3-201ENST00000542491 ZPR1O75312 459 aa12.95□□□□□ -0.34
AC140847.3-201ENST00000542491 DPEP1P16444 411 aa12.95□□□□□ -0.34
AC140847.3-201ENST00000542491 MCM10Q7L590 875 aa12.95□□□□□ -0.34
AC140847.3-201ENST00000542491 TSPYL4Q9UJ04 414 aa12.95□□□□□ -0.34
AC140847.3-201ENST00000542491 C4AP0C0L4 1744 aa12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 BRCA1P38398 1863 aaKnown RBP12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 RPS6KA4O75676 772 aa12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 GNAI1P63096 354 aa12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 COL13A1Q5TAT6 717 aaPredicted RBP12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 C16orf71Q8IYS4 520 aaPredicted RBP12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 NLGN1Q8N2Q7 840 aa12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 RBM46Q8TBY0 533 aaKnown RBP12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
AC140847.3-201ENST00000542491 KLRG1Q96E93 195 aa12.93□□□□□ -0.34
AC140847.3-201ENST00000542491 HEG1Q9ULI3 1381 aa12.93□□□□□ -0.34
AC140847.3-201ENST00000542491 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
AC140847.3-201ENST00000542491 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 CAPN15O75808 1086 aa12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 GYS1P13807 737 aa12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 ZNF652Q9Y2D9 606 aa12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 KCPQ6ZWJ8 1503 aa12.92□□□□□ -0.34
AC140847.3-201ENST00000542491 PCNTO95613 3336 aa12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 ARFGEF1Q9Y6D6 1849 aa12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 APAF1O14727 1248 aa12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 LAS1LQ9Y4W2 734 aaKnown RBP12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
AC140847.3-201ENST00000542491 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
AC140847.3-201ENST00000542491 HOXB7P09629 217 aa12.9□□□□□ -0.34
AC140847.3-201ENST00000542491 KCNA3P22001 575 aa12.9□□□□□ -0.34
AC140847.3-201ENST00000542491 FSTL1Q12841 308 aa12.9□□□□□ -0.34
AC140847.3-201ENST00000542491 ZNF496Q96IT1 587 aaPredicted RBP12.9□□□□□ -0.34
AC140847.3-201ENST00000542491 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
AC140847.3-201ENST00000542491 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
AC140847.3-201ENST00000542491 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 RGL2O15211 777 aa12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 NPHP1O15259 732 aa12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 CYP19A1P11511 503 aaPredicted RBP12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 IL6STP40189 918 aaPredicted RBP12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 DCTN1Q14203 1278 aa12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 DNAJC10Q8IXB1 793 aa12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 MYH16Q9H6N6 1097 aa12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 RNF181Q9P0P0 153 aa12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 MYH14Q7Z406 1995 aaKnown RBP12.89□□□□□ -0.35
AC140847.3-201ENST00000542491 IL16Q14005 1332 aa12.88□□□□□ -0.35
AC140847.3-201ENST00000542491 DALRD3Q5D0E6 543 aaKnown RBP12.88□□□□□ -0.35
AC140847.3-201ENST00000542491 TNS4Q8IZW8 715 aa12.88□□□□□ -0.35
AC140847.3-201ENST00000542491 PIM2Q9P1W9 311 aa12.88□□□□□ -0.35
AC140847.3-201ENST00000542491 RRP7AQ9Y3A4 280 aaKnown RBP12.88□□□□□ -0.35
AC140847.3-201ENST00000542491 TNRC6CQ9HCJ0 1690 aaKnown RBP12.87□□□□□ -0.35
AC140847.3-201ENST00000542491 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
AC140847.3-201ENST00000542491 WDR63Q8IWG1 891 aa12.87□□□□□ -0.35
AC140847.3-201ENST00000542491 RRAGCQ9HB90 399 aa12.87□□□□□ -0.35
AC140847.3-201ENST00000542491 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
AC140847.3-201ENST00000542491 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
AC140847.3-201ENST00000542491 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
AC140847.3-201ENST00000542491 CHRNA5P30532 468 aa12.86□□□□□ -0.35
AC140847.3-201ENST00000542491 DDR1Q08345 913 aa12.86□□□□□ -0.35
AC140847.3-201ENST00000542491 CHL1O00533 1208 aa12.85□□□□□ -0.35
AC140847.3-201ENST00000542491 EIF4A1P60842 406 aaKnown RBP12.85□□□□□ -0.35
AC140847.3-201ENST00000542491 FKBP8Q14318 412 aa12.85□□□□□ -0.35
AC140847.3-201ENST00000542491 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
AC140847.3-201ENST00000542491 PDZRN3Q9UPQ7 1066 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms