RNA–Protein interactions for RNA: ENST00000542254.5

CD6-212, Transcript of CD6 molecule, humanhuman

TSL 4

Gene CD6, Length 547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD6-212ENST00000542254 PARP3Q9Y6F1 533 aa27.55■■■□□ 2
CD6-212ENST00000542254 PNISRQ8TF01 805 aaKnown RBP27.54■■■□□ 2
CD6-212ENST00000542254 CHD4Q14839 1912 aa27.53■■■□□ 2
CD6-212ENST00000542254 A0A087WZG4 1122 aa27.53■■■□□ 2
CD6-212ENST00000542254 GRIN3BO60391 1043 aa27.53■■■□□ 2
CD6-212ENST00000542254 PELP1Q8IZL8 1130 aaKnown RBP27.53■■■□□ 2
CD6-212ENST00000542254 PRKRIP1Q9H875 184 aaPredicted RBP27.53■■■□□ 2
CD6-212ENST00000542254 WDR43Q15061 677 aaKnown RBP eCLIP27.52■■■□□ 2
CD6-212ENST00000542254 NPM2Q86SE8 214 aaKnown RBP27.52■■■□□ 2
CD6-212ENST00000542254 KIF13BQ9NQT8 1826 aa27.51■■□□□ 1.99
CD6-212ENST00000542254 TAF7Q15545 349 aaPredicted RBP27.51■■□□□ 1.99
CD6-212ENST00000542254 NARFQ9UHQ1 456 aa27.51■■□□□ 1.99
CD6-212ENST00000542254 LMOD3Q0VAK6 560 aa27.5■■□□□ 1.99
CD6-212ENST00000542254 DCTN1Q14203 1278 aa27.5■■□□□ 1.99
CD6-212ENST00000542254 SRP68Q9UHB9 627 aaKnown RBP27.5■■□□□ 1.99
CD6-212ENST00000542254 C10orf71Q711Q0 1435 aa27.5■■□□□ 1.99
CD6-212ENST00000542254 CANXP27824 592 aaKnown RBP27.49■■□□□ 1.99
CD6-212ENST00000542254 SNRPA1P09661 255 aaKnown RBP27.48■■□□□ 1.99
CD6-212ENST00000542254 IL6STP40189 918 aaPredicted RBP27.47■■□□□ 1.99
CD6-212ENST00000542254 EIF5P55010 431 aaKnown RBP27.47■■□□□ 1.99
CD6-212ENST00000542254 FKBP8Q14318 412 aa27.47■■□□□ 1.99
CD6-212ENST00000542254 USPL1Q5W0Q7 1092 aa27.47■■□□□ 1.99
CD6-212ENST00000542254 TGFB2P61812 414 aa27.46■■□□□ 1.99
CD6-212ENST00000542254 KCNQ3O43525 872 aa27.45■■□□□ 1.98
CD6-212ENST00000542254 KDM3BQ7LBC6 1761 aa27.45■■□□□ 1.98
CD6-212ENST00000542254 UTRNP46939 3433 aa27.44■■□□□ 1.98
CD6-212ENST00000542254 SCN7AQ01118 1682 aa27.43■■□□□ 1.98
CD6-212ENST00000542254 RIPK4P57078 832 aa27.42■■□□□ 1.98
CD6-212ENST00000542254 PXDNLA1KZ92 1463 aa27.42■■□□□ 1.98
CD6-212ENST00000542254 LAMB4A4D0S4 1761 aa27.42■■□□□ 1.98
CD6-212ENST00000542254 ZNF316A6NFI3 1004 aaPredicted RBP27.41■■□□□ 1.98
CD6-212ENST00000542254 YBX3P16989 372 aaKnown RBP eCLIP27.41■■□□□ 1.98
CD6-212ENST00000542254 TM4SF1P30408 202 aa27.41■■□□□ 1.98
CD6-212ENST00000542254 RUNDC1Q96C34 613 aa27.41■■□□□ 1.98
CD6-212ENST00000542254 ZNF330Q9Y3S2 320 aaPredicted RBP27.41■■□□□ 1.98
CD6-212ENST00000542254 GOLGB1Q14789 3259 aaKnown RBP27.4■■□□□ 1.98
CD6-212ENST00000542254 TMPOP42166 694 aaKnown RBP27.4■■□□□ 1.98
CD6-212ENST00000542254 DDR1Q08345 913 aa27.4■■□□□ 1.98
CD6-212ENST00000542254 POLRMTO00411 1230 aaKnown RBP27.39■■□□□ 1.98
CD6-212ENST00000542254 A1BGP04217 495 aa27.39■■□□□ 1.98
CD6-212ENST00000542254 BABAM1Q9NWV8 329 aa27.39■■□□□ 1.98
CD6-212ENST00000542254 KIAA1551Q9HCM1 1747 aa27.38■■□□□ 1.97
CD6-212ENST00000542254 NFIXQ14938 502 aa27.37■■□□□ 1.97
CD6-212ENST00000542254 USP16Q9Y5T5 823 aa27.37■■□□□ 1.97
CD6-212ENST00000542254 N4BP2Q86UW6 1770 aaPredicted RBP27.35■■□□□ 1.97
CD6-212ENST00000542254 THUMPD2Q9BTF0 503 aaKnown RBP27.35■■□□□ 1.97
CD6-212ENST00000542254 BCL2L12Q9HB09 334 aa27.35■■□□□ 1.97
CD6-212ENST00000542254 MIS18AQ9NYP9 233 aa27.35■■□□□ 1.97
CD6-212ENST00000542254 NRXN2Q9P2S2 1712 aa27.35■■□□□ 1.97
CD6-212ENST00000542254 RGL2O15211 777 aa27.34■■□□□ 1.97
CD6-212ENST00000542254 CCDC146Q8IYE0 955 aa27.34■■□□□ 1.97
CD6-212ENST00000542254 TSPYL4Q9UJ04 414 aa27.34■■□□□ 1.97
CD6-212ENST00000542254 ADAMTS8Q9UP79 889 aa27.34■■□□□ 1.97
CD6-212ENST00000542254 BCORQ6W2J9 1755 aa27.34■■□□□ 1.97
CD6-212ENST00000542254 EIF4A1P60842 406 aaKnown RBP27.33■■□□□ 1.97
CD6-212ENST00000542254 DZIP3Q86Y13 1208 aaKnown RBP27.33■■□□□ 1.97
CD6-212ENST00000542254 TBC1D2BQ9UPU7 963 aa27.33■■□□□ 1.97
CD6-212ENST00000542254 ZNF652Q9Y2D9 606 aa27.33■■□□□ 1.97
CD6-212ENST00000542254 AFDNP55196 1824 aaKnown RBP27.32■■□□□ 1.96
CD6-212ENST00000542254 PRAMEF22A3QJZ6 481 aa27.32■■□□□ 1.96
CD6-212ENST00000542254 GIGYF1O75420 1035 aaPredicted RBP27.32■■□□□ 1.96
CD6-212ENST00000542254 CARMIL3Q8ND23 1372 aa27.32■■□□□ 1.96
CD6-212ENST00000542254 A0A0G2JLW4 131 aa27.31■■□□□ 1.96
CD6-212ENST00000542254 SERPINB2P05120 415 aa27.31■■□□□ 1.96
CD6-212ENST00000542254 DPEP1P16444 411 aa27.31■■□□□ 1.96
CD6-212ENST00000542254 BRCA1P38398 1863 aaKnown RBP27.31■■□□□ 1.96
CD6-212ENST00000542254 CLEC4GQ6UXB4 293 aa27.3■■□□□ 1.96
CD6-212ENST00000542254 CAMTA2O94983 1202 aa27.29■■□□□ 1.96
CD6-212ENST00000542254 NEUROD2Q15784 382 aa27.29■■□□□ 1.96
CD6-212ENST00000542254 PIM2Q9P1W9 311 aa27.29■■□□□ 1.96
CD6-212ENST00000542254 ERBB4Q15303 1308 aa27.29■■□□□ 1.96
CD6-212ENST00000542254 BICDL1Q6ZP65 573 aa27.28■■□□□ 1.96
CD6-212ENST00000542254 SETDB2Q96T68 719 aa27.28■■□□□ 1.96
CD6-212ENST00000542254 PDZRN3Q9UPQ7 1066 aa27.28■■□□□ 1.96
CD6-212ENST00000542254 BCS1LQ9Y276 419 aa27.28■■□□□ 1.96
CD6-212ENST00000542254 RRP7AQ9Y3A4 280 aaKnown RBP27.28■■□□□ 1.96
CD6-212ENST00000542254 ANP32CO43423 234 aa27.27■■□□□ 1.96
CD6-212ENST00000542254 TBC1D9BQ66K14 1250 aa27.27■■□□□ 1.96
CD6-212ENST00000542254 ZNF784Q8NCA9 323 aaPredicted RBP27.27■■□□□ 1.96
CD6-212ENST00000542254 WWC3Q9ULE0 1092 aa27.26■■□□□ 1.95
CD6-212ENST00000542254 ARFGEF1Q9Y6D6 1849 aa27.25■■□□□ 1.95
CD6-212ENST00000542254 NBPF26B4DH59 902 aa27.25■■□□□ 1.95
CD6-212ENST00000542254 PIP4K2AP48426 406 aaPredicted RBP27.25■■□□□ 1.95
CD6-212ENST00000542254 NBPF10Q6P3W6 841 aaKnown RBP27.25■■□□□ 1.95
CD6-212ENST00000542254 NBPF15Q8N660 670 aa27.25■■□□□ 1.95
CD6-212ENST00000542254 NPHP1O15259 732 aa27.24■■□□□ 1.95
CD6-212ENST00000542254 DALRD3Q5D0E6 543 aaKnown RBP27.24■■□□□ 1.95
CD6-212ENST00000542254 CALD1Q05682 793 aaKnown RBP27.23■■□□□ 1.95
CD6-212ENST00000542254 DLEC1Q9Y238 1755 aa27.22■■□□□ 1.95
CD6-212ENST00000542254 KCNA3P22001 575 aa27.22■■□□□ 1.95
CD6-212ENST00000542254 CNBD1Q8NA66 436 aa27.22■■□□□ 1.95
CD6-212ENST00000542254 TRIM35Q9UPQ4 493 aa27.22■■□□□ 1.95
CD6-212ENST00000542254 ST5P78524 1137 aa27.21■■□□□ 1.95
CD6-212ENST00000542254 KIF6Q6ZMV9 814 aa27.21■■□□□ 1.95
CD6-212ENST00000542254 CHL1O00533 1208 aa27.2■■□□□ 1.94
CD6-212ENST00000542254 PDE6BP35913 854 aa27.2■■□□□ 1.94
CD6-212ENST00000542254 BRIP1Q9BX63 1249 aa27.2■■□□□ 1.94
CD6-212ENST00000542254 H0YIN7 160 aa27.19■■□□□ 1.94
CD6-212ENST00000542254 CHRNA5P30532 468 aa27.19■■□□□ 1.94
CD6-212ENST00000542254 ERVV-1B6SEH8 477 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms