RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 ZNF496Q96IT1 587 aaPredicted RBP26.77■■□□□ 1.88
DDX11-220ENST00000542244 RSPH6AQ9H0K4 717 aa26.77■■□□□ 1.88
DDX11-220ENST00000542244 COL15A1P39059 1388 aa26.76■■□□□ 1.87
DDX11-220ENST00000542244 GNAT3A8MTJ3 354 aa26.76■■□□□ 1.87
DDX11-220ENST00000542244 CANXP27824 592 aaKnown RBP26.76■■□□□ 1.87
DDX11-220ENST00000542244 PRKAR2BP31323 418 aa26.76■■□□□ 1.87
DDX11-220ENST00000542244 ARHGAP27Q6ZUM4 889 aa26.76■■□□□ 1.87
DDX11-220ENST00000542244 PPP2R1AP30153 589 aa26.75■■□□□ 1.87
DDX11-220ENST00000542244 NFIXQ14938 502 aa26.75■■□□□ 1.87
DDX11-220ENST00000542244 ZPR1O75312 459 aa26.74■■□□□ 1.87
DDX11-220ENST00000542244 NARFQ9UHQ1 456 aa26.74■■□□□ 1.87
DDX11-220ENST00000542244 SIPA1L3O60292 1781 aaPredicted RBP26.74■■□□□ 1.87
DDX11-220ENST00000542244 VSIG10Q8N0Z9 540 aa26.73■■□□□ 1.87
DDX11-220ENST00000542244 GAS2L2Q8NHY3 880 aa26.73■■□□□ 1.87
DDX11-220ENST00000542244 ZNF790Q6PG37 636 aa26.72■■□□□ 1.87
DDX11-220ENST00000542244 KIF3CO14782 793 aa26.71■■□□□ 1.87
DDX11-220ENST00000542244 TEFQ10587 303 aa26.71■■□□□ 1.87
DDX11-220ENST00000542244 CEMIPQ8WUJ3 1361 aa26.71■■□□□ 1.87
DDX11-220ENST00000542244 HEG1Q9ULI3 1381 aa26.71■■□□□ 1.87
DDX11-220ENST00000542244 EIF5P55010 431 aaKnown RBP26.7■■□□□ 1.86
DDX11-220ENST00000542244 TTC5Q8N0Z6 440 aa26.7■■□□□ 1.86
DDX11-220ENST00000542244 PIM2Q9P1W9 311 aa26.7■■□□□ 1.86
DDX11-220ENST00000542244 AFDNP55196 1824 aaKnown RBP26.69■■□□□ 1.86
DDX11-220ENST00000542244 CARMIL3Q8ND23 1372 aa26.69■■□□□ 1.86
DDX11-220ENST00000542244 PRAMEF22A3QJZ6 481 aa26.67■■□□□ 1.86
DDX11-220ENST00000542244 A1BGP04217 495 aa26.67■■□□□ 1.86
DDX11-220ENST00000542244 U2AF1L5P0DN76 240 aaPredicted RBP26.67■■□□□ 1.86
DDX11-220ENST00000542244 U2AF1Q01081 240 aaKnown RBP eCLIP26.67■■□□□ 1.86
DDX11-220ENST00000542244 BICDL1Q6ZP65 573 aa26.67■■□□□ 1.86
DDX11-220ENST00000542244 CFAP53Q96M91 514 aa26.67■■□□□ 1.86
DDX11-220ENST00000542244 NRXN2Q9P2S2 1712 aa26.66■■□□□ 1.86
DDX11-220ENST00000542244 SERPINB2P05120 415 aa26.66■■□□□ 1.86
DDX11-220ENST00000542244 DCTN1Q14203 1278 aa26.66■■□□□ 1.86
DDX11-220ENST00000542244 DALRD3Q5D0E6 543 aaKnown RBP26.66■■□□□ 1.86
DDX11-220ENST00000542244 MCM10Q7L590 875 aa26.66■■□□□ 1.86
DDX11-220ENST00000542244 ARFGEF1Q9Y6D6 1849 aa26.65■■□□□ 1.86
DDX11-220ENST00000542244 PIP4K2AP48426 406 aaPredicted RBP26.65■■□□□ 1.86
DDX11-220ENST00000542244 C9orf131Q5VYM1 1079 aa26.65■■□□□ 1.86
DDX11-220ENST00000542244 TBC1D2BQ9UPU7 963 aa26.65■■□□□ 1.86
DDX11-220ENST00000542244 STARD3NLO95772 234 aa26.64■■□□□ 1.86
DDX11-220ENST00000542244 TBC1D9BQ66K14 1250 aa26.64■■□□□ 1.86
DDX11-220ENST00000542244 CCDC24Q8N4L8 307 aa26.64■■□□□ 1.86
DDX11-220ENST00000542244 ZNF330Q9Y3S2 320 aaPredicted RBP26.64■■□□□ 1.86
DDX11-220ENST00000542244 BTBD11A6QL63 1104 aa26.63■■□□□ 1.85
DDX11-220ENST00000542244 NMRK2Q9NPI5 230 aa26.63■■□□□ 1.85
DDX11-220ENST00000542244 USP16Q9Y5T5 823 aa26.62■■□□□ 1.85
DDX11-220ENST00000542244 PRELPP51888 382 aa26.61■■□□□ 1.85
DDX11-220ENST00000542244 FMNL2Q96PY5 1086 aa26.61■■□□□ 1.85
DDX11-220ENST00000542244 RASSF7Q02833 373 aa26.6■■□□□ 1.85
DDX11-220ENST00000542244 NUDCQ9Y266 331 aa26.6■■□□□ 1.85
DDX11-220ENST00000542244 CEP350Q5VT06 3117 aa26.59■■□□□ 1.85
DDX11-220ENST00000542244 SCN7AQ01118 1682 aa26.57■■□□□ 1.84
DDX11-220ENST00000542244 CAMTA2O94983 1202 aa26.56■■□□□ 1.84
DDX11-220ENST00000542244 HSPA6P17066 643 aa26.56■■□□□ 1.84
DDX11-220ENST00000542244 IL6STP40189 918 aaPredicted RBP26.56■■□□□ 1.84
DDX11-220ENST00000542244 C2CD5Q86YS7 1000 aa26.56■■□□□ 1.84
DDX11-220ENST00000542244 TEX13AQ9BXU3 409 aaPredicted RBP26.56■■□□□ 1.84
DDX11-220ENST00000542244 MIS18AQ9NYP9 233 aa26.56■■□□□ 1.84
DDX11-220ENST00000542244 RNF181Q9P0P0 153 aa26.56■■□□□ 1.84
DDX11-220ENST00000542244 A0A087WZG4 1122 aa26.55■■□□□ 1.84
DDX11-220ENST00000542244 ANKRD31Q8N7Z5 1873 aa26.55■■□□□ 1.84
DDX11-220ENST00000542244 PRR5LQ6MZQ0 368 aa26.54■■□□□ 1.84
DDX11-220ENST00000542244 DLEC1Q9Y238 1755 aa26.53■■□□□ 1.84
DDX11-220ENST00000542244 NBPF26B4DH59 902 aa26.52■■□□□ 1.84
DDX11-220ENST00000542244 SBF1O95248 1867 aa26.52■■□□□ 1.84
DDX11-220ENST00000542244 NBPF10Q6P3W6 841 aaKnown RBP26.52■■□□□ 1.84
DDX11-220ENST00000542244 NBPF15Q8N660 670 aa26.52■■□□□ 1.84
DDX11-220ENST00000542244 RTF1Q92541 710 aaKnown RBP26.52■■□□□ 1.84
DDX11-220ENST00000542244 DZIP3Q86Y13 1208 aaKnown RBP26.5■■□□□ 1.83
DDX11-220ENST00000542244 TTLL6Q8N841 843 aa26.5■■□□□ 1.83
DDX11-220ENST00000542244 PLEKHF1Q96S99 279 aa26.5■■□□□ 1.83
DDX11-220ENST00000542244 COL11A2P13942 1736 aaPredicted RBP26.5■■□□□ 1.83
DDX11-220ENST00000542244 THUMPD2Q9BTF0 503 aaKnown RBP26.49■■□□□ 1.83
DDX11-220ENST00000542244 ZNF219Q9P2Y4 722 aaPredicted RBP26.49■■□□□ 1.83
DDX11-220ENST00000542244 H0YIN7 160 aa26.48■■□□□ 1.83
DDX11-220ENST00000542244 NFKBIEO00221 500 aa26.48■■□□□ 1.83
DDX11-220ENST00000542244 SNRPA1P09661 255 aaKnown RBP26.48■■□□□ 1.83
DDX11-220ENST00000542244 BCORQ6W2J9 1755 aa26.48■■□□□ 1.83
DDX11-220ENST00000542244 TOMM70O94826 608 aa26.46■■□□□ 1.83
DDX11-220ENST00000542244 ZNF622Q969S3 477 aaKnown RBP eCLIP26.46■■□□□ 1.833e-6■■□□□ 12.7
DDX11-220ENST00000542244 BRIP1Q9BX63 1249 aa26.46■■□□□ 1.83
DDX11-220ENST00000542244 RRAGCQ9HB90 399 aa26.46■■□□□ 1.83
DDX11-220ENST00000542244 HTATSF1O43719 755 aaKnown RBP26.45■■□□□ 1.82
DDX11-220ENST00000542244 TAF7Q15545 349 aaPredicted RBP26.45■■□□□ 1.82
DDX11-220ENST00000542244 SETDB2Q96T68 719 aa26.45■■□□□ 1.82
DDX11-220ENST00000542244 DLG5Q8TDM6 1919 aa26.43■■□□□ 1.82
DDX11-220ENST00000542244 C21orf2O43822 256 aa26.42■■□□□ 1.82
DDX11-220ENST00000542244 CNBD1Q8NA66 436 aa26.42■■□□□ 1.82
DDX11-220ENST00000542244 HTRA3P83110 453 aa26.41■■□□□ 1.82
DDX11-220ENST00000542244 HLFQ16534 295 aa26.41■■□□□ 1.82
DDX11-220ENST00000542244 LMNB1P20700 586 aa26.4■■□□□ 1.82
DDX11-220ENST00000542244 PDE6BP35913 854 aa26.4■■□□□ 1.82
DDX11-220ENST00000542244 NFE2L2Q16236 605 aa26.39■■□□□ 1.82
DDX11-220ENST00000542244 KDM3BQ7LBC6 1761 aa26.38■■□□□ 1.81
DDX11-220ENST00000542244 SLX4Q8IY92 1834 aa26.38■■□□□ 1.81
DDX11-220ENST00000542244 FAM177BA6PVY3 158 aa26.38■■□□□ 1.81
DDX11-220ENST00000542244 SRGNP10124 158 aa26.38■■□□□ 1.81
DDX11-220ENST00000542244 NPM2Q86SE8 214 aaKnown RBP26.38■■□□□ 1.81
DDX11-220ENST00000542244 KDM2BQ8NHM5 1336 aa26.38■■□□□ 1.81
DDX11-220ENST00000542244 EIF4A1P60842 406 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms