RNA–Protein interactions for RNA: ENST00000542191.5

SNCAIP-222, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5 BASIC

Gene SNCAIP, Length 2,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-222ENST00000542191 PA2G4Q9UQ80 394 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-222ENST00000542191 COL5A2P05997 1499 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-222ENST00000542191 LMO7Q8WWI1 1683 aa17.24■□□□□ 0.35
SNCAIP-222ENST00000542191 IL2RBP14784 551 aa17.24■□□□□ 0.35
SNCAIP-222ENST00000542191 SLKQ9H2G2 1235 aaPredicted RBP17.24■□□□□ 0.35
SNCAIP-222ENST00000542191 NCOA3Q9Y6Q9 1424 aa17.24■□□□□ 0.35
SNCAIP-222ENST00000542191 A1BGP04217 495 aa17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 PDIA6Q15084 440 aa17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 NUTM1Q86Y26 1132 aa17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 PLEKHM2Q8IWE5 1019 aa17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 UBE2Q2Q8WVN8 375 aa17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 ANO8Q9HCE9 1232 aaPredicted RBP17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
SNCAIP-222ENST00000542191 BEND3Q5T5X7 828 aa17.22■□□□□ 0.35
SNCAIP-222ENST00000542191 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
SNCAIP-222ENST00000542191 SIL1Q9H173 461 aa17.22■□□□□ 0.35
SNCAIP-222ENST00000542191 UTRNP46939 3433 aa17.22■□□□□ 0.35
SNCAIP-222ENST00000542191 SURF6O75683 361 aaKnown RBP17.21■□□□□ 0.35
SNCAIP-222ENST00000542191 MYD88Q99836 296 aa17.21■□□□□ 0.35
SNCAIP-222ENST00000542191 ASAP1Q9ULH1 1129 aa17.21■□□□□ 0.35
SNCAIP-222ENST00000542191 KDM3BQ7LBC6 1761 aa17.21■□□□□ 0.35
SNCAIP-222ENST00000542191 NCAPD2Q15021 1401 aa17.21■□□□□ 0.34
SNCAIP-222ENST00000542191 RPAP2Q8IXW5 612 aaPredicted RBP17.2■□□□□ 0.34
SNCAIP-222ENST00000542191 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
SNCAIP-222ENST00000542191 CHMP4BQ9H444 224 aaKnown RBP17.2■□□□□ 0.34
SNCAIP-222ENST00000542191 CPDO75976 1380 aa17.2■□□□□ 0.34
SNCAIP-222ENST00000542191 CRYBG1Q9Y4K1 1723 aa17.2■□□□□ 0.34
SNCAIP-222ENST00000542191 ACSBG1Q96GR2 724 aa17.2■□□□□ 0.34
SNCAIP-222ENST00000542191 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
SNCAIP-222ENST00000542191 ZBTB3Q9H5J0 574 aa17.2■□□□□ 0.34
SNCAIP-222ENST00000542191 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.19■□□□□ 0.34
SNCAIP-222ENST00000542191 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
SNCAIP-222ENST00000542191 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
SNCAIP-222ENST00000542191 GNAI3P08754 354 aa17.18■□□□□ 0.34
SNCAIP-222ENST00000542191 FAM182BQ5T319 152 aa17.18■□□□□ 0.34
SNCAIP-222ENST00000542191 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
SNCAIP-222ENST00000542191 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
SNCAIP-222ENST00000542191 PODXL2Q9NZ53 605 aa17.18■□□□□ 0.34
SNCAIP-222ENST00000542191 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
SNCAIP-222ENST00000542191 C22orf23Q9BZE7 217 aa17.18■□□□□ 0.34
SNCAIP-222ENST00000542191 C5P01031 1676 aa17.17■□□□□ 0.34
SNCAIP-222ENST00000542191 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
SNCAIP-222ENST00000542191 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
SNCAIP-222ENST00000542191 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
SNCAIP-222ENST00000542191 IGKV5-2P06315 115 aa17.17■□□□□ 0.34
SNCAIP-222ENST00000542191 FMNL2Q96PY5 1086 aa17.17■□□□□ 0.34
SNCAIP-222ENST00000542191 CARD10Q9BWT7 1032 aa17.17■□□□□ 0.34
SNCAIP-222ENST00000542191 DDX21Q9NR30 783 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNCAIP-222ENST00000542191 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 KCNQ4P56696 695 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 RILPL2Q969X0 211 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 BABAM1Q9NWV8 329 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 HMMRO75330 724 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 NBPF10Q6P3W6 841 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 OVOS2A0A0G2JMS6 1433 aa17.16■□□□□ 0.34
SNCAIP-222ENST00000542191 UBAP1LF5GYI3 381 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 SDSP20132 328 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 SUCLG2Q96I99 432 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 TRIM6-TRIM34B2RNG4 842 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 TBC1D32Q96NH3 1257 aa17.15■□□□□ 0.34
SNCAIP-222ENST00000542191 BICC1Q9H694 974 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-222ENST00000542191 PIGBQ92521 554 aa17.14■□□□□ 0.33
SNCAIP-222ENST00000542191 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
SNCAIP-222ENST00000542191 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
SNCAIP-222ENST00000542191 UBE3BQ7Z3V4 1068 aa17.13■□□□□ 0.33
SNCAIP-222ENST00000542191 BMP2KLQ5H9B9 411 aa17.13■□□□□ 0.33
SNCAIP-222ENST00000542191 TTC22Q5TAA0 569 aa17.13■□□□□ 0.33
SNCAIP-222ENST00000542191 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
SNCAIP-222ENST00000542191 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
SNCAIP-222ENST00000542191 C8orf37Q96NL8 207 aa17.13■□□□□ 0.33
SNCAIP-222ENST00000542191 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
SNCAIP-222ENST00000542191 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
SNCAIP-222ENST00000542191 KAZALD1Q96I82 304 aa17.12■□□□□ 0.33
SNCAIP-222ENST00000542191 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
SNCAIP-222ENST00000542191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNCAIP-222ENST00000542191 ABCA3Q99758 1704 aa17.12■□□□□ 0.33
SNCAIP-222ENST00000542191 PDE1AP54750 535 aa17.12■□□□□ 0.33
SNCAIP-222ENST00000542191 DNAJC10Q8IXB1 793 aa17.12■□□□□ 0.33
SNCAIP-222ENST00000542191 SIPA1L3O60292 1781 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-222ENST00000542191 HOXB7P09629 217 aa17.11■□□□□ 0.33
SNCAIP-222ENST00000542191 PRIM1P49642 420 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-222ENST00000542191 NDUFB9Q9Y6M9 179 aa17.11■□□□□ 0.33
SNCAIP-222ENST00000542191 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
SNCAIP-222ENST00000542191 DDRGK1Q96HY6 314 aa17.1■□□□□ 0.33
SNCAIP-222ENST00000542191 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
SNCAIP-222ENST00000542191 GRM8O00222 908 aa17.1■□□□□ 0.33
SNCAIP-222ENST00000542191 CD2BP2O95400 341 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms