RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 PNISRQ8TF01 805 aaKnown RBP23.12■■□□□ 1.29
TRPT1-212ENST00000542040 PIM2Q9P1W9 311 aa23.12■■□□□ 1.29
TRPT1-212ENST00000542040 BCS1LQ9Y276 419 aa23.12■■□□□ 1.29
TRPT1-212ENST00000542040 KCPQ6ZWJ8 1503 aa23.12■■□□□ 1.29
TRPT1-212ENST00000542040 MAPK8IP3Q9UPT6 1336 aa23.11■■□□□ 1.29
TRPT1-212ENST00000542040 TJP1Q07157 1748 aa23.11■■□□□ 1.29
TRPT1-212ENST00000542040 C10orf71Q711Q0 1435 aa23.11■■□□□ 1.29
TRPT1-212ENST00000542040 GIGYF1O75420 1035 aaPredicted RBP23.11■■□□□ 1.29
TRPT1-212ENST00000542040 TM4SF1P30408 202 aa23.11■■□□□ 1.29
TRPT1-212ENST00000542040 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
TRPT1-212ENST00000542040 TAF7Q15545 349 aaPredicted RBP23.1■■□□□ 1.29
TRPT1-212ENST00000542040 MYH14Q7Z406 1995 aaKnown RBP23.09■■□□□ 1.29
TRPT1-212ENST00000542040 C4AP0C0L4 1744 aa23.09■■□□□ 1.29
TRPT1-212ENST00000542040 SNRPA1P09661 255 aaKnown RBP23.09■■□□□ 1.29
TRPT1-212ENST00000542040 DPEP1P16444 411 aa23.09■■□□□ 1.29
TRPT1-212ENST00000542040 EIF5P55010 431 aaKnown RBP23.09■■□□□ 1.29
TRPT1-212ENST00000542040 MCM10Q7L590 875 aa23.09■■□□□ 1.29
TRPT1-212ENST00000542040 WWC3Q9ULE0 1092 aa23.09■■□□□ 1.29
TRPT1-212ENST00000542040 ZNF330Q9Y3S2 320 aaPredicted RBP23.09■■□□□ 1.29
TRPT1-212ENST00000542040 POLRMTO00411 1230 aaKnown RBP23.08■■□□□ 1.29
TRPT1-212ENST00000542040 PXDNLA1KZ92 1463 aa23.07■■□□□ 1.28
TRPT1-212ENST00000542040 DALRD3Q5D0E6 543 aaKnown RBP23.07■■□□□ 1.28
TRPT1-212ENST00000542040 UTRNP46939 3433 aa23.07■■□□□ 1.28
TRPT1-212ENST00000542040 DDR1Q08345 913 aa23.06■■□□□ 1.28
TRPT1-212ENST00000542040 DDX10Q13206 875 aaKnown RBP23.06■■□□□ 1.28
TRPT1-212ENST00000542040 ARHGAP27Q6ZUM4 889 aa23.06■■□□□ 1.28
TRPT1-212ENST00000542040 GPBP1L1Q9HC44 474 aaPredicted RBP23.06■■□□□ 1.28
TRPT1-212ENST00000542040 PDZRN3Q9UPQ7 1066 aa23.06■■□□□ 1.28
TRPT1-212ENST00000542040 NPHP1O15259 732 aa23.05■■□□□ 1.28
TRPT1-212ENST00000542040 SERPINB2P05120 415 aa23.05■■□□□ 1.28
TRPT1-212ENST00000542040 NFIXQ14938 502 aa23.05■■□□□ 1.28
TRPT1-212ENST00000542040 VIRMAQ69YN4 1812 aaKnown RBP23.04■■□□□ 1.28
TRPT1-212ENST00000542040 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
TRPT1-212ENST00000542040 NFE2L2Q16236 605 aa23.04■■□□□ 1.28
TRPT1-212ENST00000542040 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
TRPT1-212ENST00000542040 ZNF652Q9Y2D9 606 aa23.03■■□□□ 1.28
TRPT1-212ENST00000542040 UBR2Q8IWV8 1755 aa23.02■■□□□ 1.28
TRPT1-212ENST00000542040 SETDB2Q96T68 719 aa23.02■■□□□ 1.28
TRPT1-212ENST00000542040 A1BGP04217 495 aa23.01■■□□□ 1.27
TRPT1-212ENST00000542040 LMOD3Q0VAK6 560 aa23.01■■□□□ 1.27
TRPT1-212ENST00000542040 DCTN1Q14203 1278 aa23.01■■□□□ 1.27
TRPT1-212ENST00000542040 BICDL1Q6ZP65 573 aa23.01■■□□□ 1.27
TRPT1-212ENST00000542040 TBC1D2BQ9UPU7 963 aa23.01■■□□□ 1.27
TRPT1-212ENST00000542040 MYBBP1AQ9BQG0 1328 aaKnown RBP23.01■■□□□ 1.27
TRPT1-212ENST00000542040 KIF13BQ9NQT8 1826 aa23.01■■□□□ 1.27
TRPT1-212ENST00000542040 H0YIN7 160 aa23■■□□□ 1.27
TRPT1-212ENST00000542040 KCNQ3O43525 872 aa23■■□□□ 1.27
TRPT1-212ENST00000542040 DZIP3Q86Y13 1208 aaKnown RBP23■■□□□ 1.27
TRPT1-212ENST00000542040 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
TRPT1-212ENST00000542040 ATP10DQ9P241 1426 aa22.99■■□□□ 1.27
TRPT1-212ENST00000542040 PDE6BP35913 854 aa22.99■■□□□ 1.27
TRPT1-212ENST00000542040 CLEC4GQ6UXB4 293 aa22.99■■□□□ 1.27
TRPT1-212ENST00000542040 USP16Q9Y5T5 823 aa22.99■■□□□ 1.27
TRPT1-212ENST00000542040 KCNA3P22001 575 aa22.98■■□□□ 1.27
TRPT1-212ENST00000542040 BCL2L12Q9HB09 334 aa22.98■■□□□ 1.27
TRPT1-212ENST00000542040 RGL2O15211 777 aa22.97■■□□□ 1.27
TRPT1-212ENST00000542040 ST5P78524 1137 aa22.97■■□□□ 1.27
TRPT1-212ENST00000542040 WDR43Q15061 677 aaKnown RBP eCLIP22.97■■□□□ 1.27
TRPT1-212ENST00000542040 CARMIL3Q8ND23 1372 aa22.97■■□□□ 1.27
TRPT1-212ENST00000542040 SIPA1L3O60292 1781 aaPredicted RBP22.96■■□□□ 1.27
TRPT1-212ENST00000542040 GOLGB1Q14789 3259 aaKnown RBP22.96■■□□□ 1.27
TRPT1-212ENST00000542040 CHRNA5P30532 468 aa22.96■■□□□ 1.27
TRPT1-212ENST00000542040 TBC1D9BQ66K14 1250 aa22.96■■□□□ 1.27
TRPT1-212ENST00000542040 TTLL6Q8N841 843 aa22.96■■□□□ 1.27
TRPT1-212ENST00000542040 C2CD5Q86YS7 1000 aa22.95■■□□□ 1.26
TRPT1-212ENST00000542040 BRIP1Q9BX63 1249 aa22.95■■□□□ 1.26
TRPT1-212ENST00000542040 RIPK4P57078 832 aa22.94■■□□□ 1.26
TRPT1-212ENST00000542040 ZNF526Q8TF50 670 aaPredicted RBP22.94■■□□□ 1.26
TRPT1-212ENST00000542040 BABAM1Q9NWV8 329 aa22.94■■□□□ 1.26
TRPT1-212ENST00000542040 ADCY9O60503 1353 aa22.93■■□□□ 1.26
TRPT1-212ENST00000542040 CAMTA2O94983 1202 aa22.93■■□□□ 1.26
TRPT1-212ENST00000542040 CNBD1Q8NA66 436 aa22.93■■□□□ 1.26
TRPT1-212ENST00000542040 MIS18AQ9NYP9 233 aa22.93■■□□□ 1.26
TRPT1-212ENST00000542040 N4BP2Q86UW6 1770 aaPredicted RBP22.93■■□□□ 1.26
TRPT1-212ENST00000542040 SENP3-EIF4A1A0A087X0R7 540 aa22.91■■□□□ 1.26
TRPT1-212ENST00000542040 C9orf131Q5VYM1 1079 aa22.9■■□□□ 1.26
TRPT1-212ENST00000542040 TPTE2Q6XPS3 522 aa22.9■■□□□ 1.26
TRPT1-212ENST00000542040 NBPF5PQ86XG9 351 aaPredicted RBP22.9■■□□□ 1.26
TRPT1-212ENST00000542040 ZNF622Q969S3 477 aaKnown RBP eCLIP22.9■■□□□ 1.26
TRPT1-212ENST00000542040 TSPYL4Q9UJ04 414 aa22.9■■□□□ 1.26
TRPT1-212ENST00000542040 EIF4A1P60842 406 aaKnown RBP22.89■■□□□ 1.25
TRPT1-212ENST00000542040 KIF6Q6ZMV9 814 aa22.89■■□□□ 1.25
TRPT1-212ENST00000542040 PRAMEF22A3QJZ6 481 aa22.88■■□□□ 1.25
TRPT1-212ENST00000542040 GTF2E1P29083 439 aaPredicted RBP22.88■■□□□ 1.25
TRPT1-212ENST00000542040 TMPOP42166 694 aaKnown RBP22.88■■□□□ 1.25
TRPT1-212ENST00000542040 PRR5LQ6MZQ0 368 aa22.88■■□□□ 1.25
TRPT1-212ENST00000542040 CNKSR1Q969H4 720 aa22.88■■□□□ 1.25
TRPT1-212ENST00000542040 RUNDC1Q96C34 613 aa22.88■■□□□ 1.25
TRPT1-212ENST00000542040 KDM2BQ8NHM5 1336 aa22.87■■□□□ 1.25
TRPT1-212ENST00000542040 RNF181Q9P0P0 153 aa22.87■■□□□ 1.25
TRPT1-212ENST00000542040 KIAA1551Q9HCM1 1747 aa22.87■■□□□ 1.25
TRPT1-212ENST00000542040 ERBB4Q15303 1308 aa22.86■■□□□ 1.25
TRPT1-212ENST00000542040 ERVV-1B6SEH8 477 aa22.86■■□□□ 1.25
TRPT1-212ENST00000542040 PIP4K2AP48426 406 aaPredicted RBP22.86■■□□□ 1.25
TRPT1-212ENST00000542040 SOGA3Q5TF21 947 aa22.86■■□□□ 1.25
TRPT1-212ENST00000542040 NIP7Q9Y221 180 aaKnown RBP eCLIP22.86■■□□□ 1.25
TRPT1-212ENST00000542040 C16orf71Q8IYS4 520 aaPredicted RBP22.85■■□□□ 1.25
TRPT1-212ENST00000542040 NYXQ9GZU5 481 aa22.85■■□□□ 1.25
TRPT1-212ENST00000542040 RRP7AQ9Y3A4 280 aaKnown RBP22.85■■□□□ 1.25
TRPT1-212ENST00000542040 ZC3H4Q9UPT8 1303 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms