RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 LGR6Q9HBX8 967 aa25.86■■□□□ 1.73
RAP1B-227ENST00000542018 MRC1P22897 1456 aa25.85■■□□□ 1.73
RAP1B-227ENST00000542018 COL13A1Q5TAT6 717 aaPredicted RBP25.85■■□□□ 1.73
RAP1B-227ENST00000542018 MORC1Q86VD1 984 aa25.85■■□□□ 1.73
RAP1B-227ENST00000542018 HSPA5P11021 654 aaKnown RBP25.84■■□□□ 1.73
RAP1B-227ENST00000542018 CYP19A1P11511 503 aaPredicted RBP25.84■■□□□ 1.73
RAP1B-227ENST00000542018 SLC52A2Q9HAB3 445 aa25.84■■□□□ 1.73
RAP1B-227ENST00000542018 BCL2L12Q9HB09 334 aa25.84■■□□□ 1.73
RAP1B-227ENST00000542018 NFIXQ14938 502 aa25.83■■□□□ 1.73
RAP1B-227ENST00000542018 AKAP4Q5JQC9 854 aa25.83■■□□□ 1.73
RAP1B-227ENST00000542018 ZPR1O75312 459 aa25.82■■□□□ 1.72
RAP1B-227ENST00000542018 SLC39A6Q13433 755 aa25.82■■□□□ 1.72
RAP1B-227ENST00000542018 CCDC88AQ3V6T2 1871 aa25.82■■□□□ 1.72
RAP1B-227ENST00000542018 NARFQ9UHQ1 456 aa25.81■■□□□ 1.72
RAP1B-227ENST00000542018 ZBTB1Q9Y2K1 713 aa25.8■■□□□ 1.72
RAP1B-227ENST00000542018 COL15A1P39059 1388 aa25.8■■□□□ 1.72
RAP1B-227ENST00000542018 RNMTO43148 476 aaKnown RBP25.79■■□□□ 1.72
RAP1B-227ENST00000542018 EIF4G2P78344 907 aaKnown RBP eCLIP25.79■■□□□ 1.72
RAP1B-227ENST00000542018 SMC1BQ8NDV3 1235 aa25.78■■□□□ 1.72
RAP1B-227ENST00000542018 CARMIL3Q8ND23 1372 aa25.78■■□□□ 1.72
RAP1B-227ENST00000542018 TIAM2Q8IVF5 1701 aa25.77■■□□□ 1.72
RAP1B-227ENST00000542018 UBR2Q8IWV8 1755 aa25.77■■□□□ 1.72
RAP1B-227ENST00000542018 ZC3H4Q9UPT8 1303 aaKnown RBP25.77■■□□□ 1.72
RAP1B-227ENST00000542018 SERPINB2P05120 415 aa25.76■■□□□ 1.71
RAP1B-227ENST00000542018 LMNB1P20700 586 aa25.76■■□□□ 1.71
RAP1B-227ENST00000542018 ANKRD31Q8N7Z5 1873 aa25.75■■□□□ 1.71
RAP1B-227ENST00000542018 GLTPD2A6NH11 291 aa25.75■■□□□ 1.71
RAP1B-227ENST00000542018 NFKBIEO00221 500 aa25.74■■□□□ 1.71
RAP1B-227ENST00000542018 AMER1Q5JTC6 1135 aaPredicted RBP25.74■■□□□ 1.71
RAP1B-227ENST00000542018 CLSPNQ9HAW4 1339 aa25.73■■□□□ 1.71
RAP1B-227ENST00000542018 POTECB2RU33 542 aa25.73■■□□□ 1.71
RAP1B-227ENST00000542018 HMOX1P09601 288 aa25.73■■□□□ 1.71
RAP1B-227ENST00000542018 TTLL6Q8N841 843 aa25.73■■□□□ 1.71
RAP1B-227ENST00000542018 MTHFSDQ2M296 383 aaKnown RBP25.72■■□□□ 1.71
RAP1B-227ENST00000542018 C2CD5Q86YS7 1000 aa25.72■■□□□ 1.71
RAP1B-227ENST00000542018 VEGFAP15692 232 aaPredicted RBP25.71■■□□□ 1.71
RAP1B-227ENST00000542018 VSIG10Q8N0Z9 540 aa25.71■■□□□ 1.71
RAP1B-227ENST00000542018 KNSTRNQ9Y448 316 aa25.71■■□□□ 1.71
RAP1B-227ENST00000542018 COL11A2P13942 1736 aaPredicted RBP25.69■■□□□ 1.7
RAP1B-227ENST00000542018 EIF5P55010 431 aaKnown RBP25.69■■□□□ 1.7
RAP1B-227ENST00000542018 CANXP27824 592 aaKnown RBP25.68■■□□□ 1.7
RAP1B-227ENST00000542018 DICER1Q9UPY3 1922 aaKnown RBP25.68■■□□□ 1.7
RAP1B-227ENST00000542018 FER1L6Q2WGJ9 1857 aa25.68■■□□□ 1.7
RAP1B-227ENST00000542018 H0YIN7 160 aa25.66■■□□□ 1.7
RAP1B-227ENST00000542018 TBC1D9BQ66K14 1250 aa25.66■■□□□ 1.7
RAP1B-227ENST00000542018 BICDL1Q6ZP65 573 aa25.66■■□□□ 1.7
RAP1B-227ENST00000542018 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
RAP1B-227ENST00000542018 SCN7AQ01118 1682 aa25.66■■□□□ 1.7
RAP1B-227ENST00000542018 TNS4Q8IZW8 715 aa25.65■■□□□ 1.7
RAP1B-227ENST00000542018 CAPN15O75808 1086 aa25.64■■□□□ 1.7
RAP1B-227ENST00000542018 SIPA1L3O60292 1781 aaPredicted RBP25.64■■□□□ 1.69
RAP1B-227ENST00000542018 HSPA1AP0DMV8 641 aaKnown RBP25.63■■□□□ 1.69
RAP1B-227ENST00000542018 HSPA1BP0DMV9 641 aaKnown RBP25.63■■□□□ 1.69
RAP1B-227ENST00000542018 CCDC24Q8N4L8 307 aa25.63■■□□□ 1.69
RAP1B-227ENST00000542018 ZNF496Q96IT1 587 aaPredicted RBP25.62■■□□□ 1.69
RAP1B-227ENST00000542018 C21orf2O43822 256 aa25.61■■□□□ 1.69
RAP1B-227ENST00000542018 PRR5LQ6MZQ0 368 aa25.61■■□□□ 1.69
RAP1B-227ENST00000542018 IL17REQ8NFR9 667 aa25.6■■□□□ 1.69
RAP1B-227ENST00000542018 ZNF622Q969S3 477 aaKnown RBP eCLIP25.6■■□□□ 1.69
RAP1B-227ENST00000542018 BRIP1Q9BX63 1249 aa25.6■■□□□ 1.69
RAP1B-227ENST00000542018 SLX4Q8IY92 1834 aa25.6■■□□□ 1.69
RAP1B-227ENST00000542018 HEG1Q9ULI3 1381 aa25.59■■□□□ 1.69
RAP1B-227ENST00000542018 PER1O15534 1290 aaPredicted RBP25.59■■□□□ 1.69
RAP1B-227ENST00000542018 DIAPH1O60610 1272 aaKnown RBP25.59■■□□□ 1.69
RAP1B-227ENST00000542018 STARD3NLO95772 234 aa25.59■■□□□ 1.69
RAP1B-227ENST00000542018 ZNF219Q9P2Y4 722 aaPredicted RBP25.59■■□□□ 1.69
RAP1B-227ENST00000542018 TBC1D2BQ9UPU7 963 aa25.59■■□□□ 1.69
RAP1B-227ENST00000542018 COL3A1P02461 1466 aaPredicted RBP25.59■■□□□ 1.69
RAP1B-227ENST00000542018 CACNA1SQ13698 1873 aa25.58■■□□□ 1.69
RAP1B-227ENST00000542018 A0A087WZG4 1122 aa25.58■■□□□ 1.69
RAP1B-227ENST00000542018 ERFEQ4G0M1 354 aa25.57■■□□□ 1.68
RAP1B-227ENST00000542018 ZNF790Q6PG37 636 aa25.57■■□□□ 1.68
RAP1B-227ENST00000542018 KIF7Q2M1P5 1343 aa25.57■■□□□ 1.68
RAP1B-227ENST00000542018 POTEIP0CG38 1075 aa25.56■■□□□ 1.68
RAP1B-227ENST00000542018 POTEJP0CG39 1038 aa25.56■■□□□ 1.68
RAP1B-227ENST00000542018 PDE6BP35913 854 aa25.56■■□□□ 1.68
RAP1B-227ENST00000542018 TTC5Q8N0Z6 440 aa25.56■■□□□ 1.68
RAP1B-227ENST00000542018 DPY19L2Q6NUT2 758 aa25.55■■□□□ 1.68
RAP1B-227ENST00000542018 LTBP3Q9NS15 1303 aa25.55■■□□□ 1.68
RAP1B-227ENST00000542018 BCORQ6W2J9 1755 aa25.54■■□□□ 1.68
RAP1B-227ENST00000542018 ARFGEF2Q9Y6D5 1785 aa25.54■■□□□ 1.68
RAP1B-227ENST00000542018 CAMTA2O94983 1202 aa25.54■■□□□ 1.68
RAP1B-227ENST00000542018 A1BGP04217 495 aa25.54■■□□□ 1.68
RAP1B-227ENST00000542018 IL6STP40189 918 aaPredicted RBP25.54■■□□□ 1.68
RAP1B-227ENST00000542018 PDZRN3Q9UPQ7 1066 aa25.54■■□□□ 1.68
RAP1B-227ENST00000542018 KCNQ3O43525 872 aa25.52■■□□□ 1.68
RAP1B-227ENST00000542018 DDNO94850 711 aaPredicted RBP25.52■■□□□ 1.68
RAP1B-227ENST00000542018 CC2D1BQ5T0F9 858 aaKnown RBP25.52■■□□□ 1.68
RAP1B-227ENST00000542018 ZNF330Q9Y3S2 320 aaPredicted RBP25.52■■□□□ 1.68
RAP1B-227ENST00000542018 GNAT3A8MTJ3 354 aa25.51■■□□□ 1.67
RAP1B-227ENST00000542018 SRGNP10124 158 aa25.51■■□□□ 1.67
RAP1B-227ENST00000542018 TEX13AQ9BXU3 409 aaPredicted RBP25.51■■□□□ 1.67
RAP1B-227ENST00000542018 TAOK3Q9H2K8 898 aa25.51■■□□□ 1.67
RAP1B-227ENST00000542018 TEFQ10587 303 aa25.5■■□□□ 1.67
RAP1B-227ENST00000542018 CHADLQ6NUI6 762 aa25.5■■□□□ 1.67
RAP1B-227ENST00000542018 CEMIPQ8WUJ3 1361 aa25.5■■□□□ 1.67
RAP1B-227ENST00000542018 CREBZFQ9NS37 354 aa25.5■■□□□ 1.67
RAP1B-227ENST00000542018 STYK1Q6J9G0 422 aa25.49■■□□□ 1.67
RAP1B-227ENST00000542018 PRPF40BQ6NWY9 871 aaKnown RBP25.49■■□□□ 1.67
RAP1B-227ENST00000542018 CNBD1Q8NA66 436 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms