RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 ARSJQ5FYB0 599 aaPredicted RBP9.87□□□□□ -0.83
CIT-211ENST00000541841 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
CIT-211ENST00000541841 ZCCHC2Q9C0B9 1178 aaKnown RBP9.87□□□□□ -0.83
CIT-211ENST00000541841 MKRN1Q9UHC7 482 aaKnown RBP9.87□□□□□ -0.83
CIT-211ENST00000541841 BACH1O14867 736 aa9.86□□□□□ -0.83
CIT-211ENST00000541841 BCRP11274 1271 aa9.86□□□□□ -0.83
CIT-211ENST00000541841 EPHA4P54764 986 aa9.86□□□□□ -0.83
CIT-211ENST00000541841 RASSF7Q02833 373 aa9.86□□□□□ -0.83
CIT-211ENST00000541841 SH3PXD2AQ5TCZ1 1133 aa9.86□□□□□ -0.83
CIT-211ENST00000541841 CCDC102BQ68D86 513 aa9.86□□□□□ -0.83
CIT-211ENST00000541841 KLRG1Q96E93 195 aa9.86□□□□□ -0.83
CIT-211ENST00000541841 ZNF594Q96JF6 807 aaPredicted RBP9.86□□□□□ -0.83
CIT-211ENST00000541841 NDFIP2Q9NV92 336 aa9.86□□□□□ -0.83
CIT-211ENST00000541841 SCHIP1Q9P0W5 487 aaPredicted RBP9.86□□□□□ -0.83
CIT-211ENST00000541841 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
CIT-211ENST00000541841 A0A1W2PNR3 127 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 DCDC2BA2VCK2 349 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 FGFR3P22607 806 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 LBRQ14739 615 aaKnown RBP9.85□□□□□ -0.83
CIT-211ENST00000541841 NBPF1Q3BBV0 1214 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 C1orf229Q6ZS94 237 aaPredicted RBP9.85□□□□□ -0.83
CIT-211ENST00000541841 SLC9A9Q8IVB4 645 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 HOMEZQ8IX15 550 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 OGFOD1Q8N543 542 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 NEDD1Q8NHV4 660 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 OXCT2Q9BYC2 517 aaPredicted RBP9.85□□□□□ -0.83
CIT-211ENST00000541841 PHF24Q9UPV7 400 aa9.85□□□□□ -0.83
CIT-211ENST00000541841 CNTNAP5Q8WYK1 1306 aa9.84□□□□□ -0.83
CIT-211ENST00000541841 SFI1A8K8P3 1242 aa9.84□□□□□ -0.83
CIT-211ENST00000541841 FOXK2Q01167 660 aa9.84□□□□□ -0.83
CIT-211ENST00000541841 TRIM50Q86XT4 487 aa9.84□□□□□ -0.83
CIT-211ENST00000541841 KCTD17Q8N5Z5 321 aa9.84□□□□□ -0.83
CIT-211ENST00000541841 ATXN7L1Q9ULK2 861 aaPredicted RBP9.84□□□□□ -0.83
CIT-211ENST00000541841 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
CIT-211ENST00000541841 BMP4P12644 408 aa9.83□□□□□ -0.84
CIT-211ENST00000541841 L3MBTL2Q969R5 705 aa9.83□□□□□ -0.84
CIT-211ENST00000541841 ZIC5Q96T25 663 aa9.83□□□□□ -0.84
CIT-211ENST00000541841 SHISA8B8ZZ34 492 aa9.82□□□□□ -0.84
CIT-211ENST00000541841 ATXN7O15265 892 aaPredicted RBP9.82□□□□□ -0.84
CIT-211ENST00000541841 LGR5O75473 907 aa9.82□□□□□ -0.84
CIT-211ENST00000541841 GDF11O95390 407 aa9.82□□□□□ -0.84
CIT-211ENST00000541841 TATP17735 454 aaPredicted RBP9.82□□□□□ -0.84
CIT-211ENST00000541841 MAP2K3P46734 347 aa9.82□□□□□ -0.84
CIT-211ENST00000541841 TSEN2Q8NCE0 465 aaKnown RBP9.82□□□□□ -0.84
CIT-211ENST00000541841 C1orf216Q8TAB5 229 aa9.82□□□□□ -0.84
CIT-211ENST00000541841 TSPAN10Q9H1Z9 355 aaPredicted RBP9.82□□□□□ -0.84
CIT-211ENST00000541841 ENAMQ9NRM1 1142 aa9.82□□□□□ -0.84
CIT-211ENST00000541841 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
CIT-211ENST00000541841 PCDHGC4Q9Y5F7 938 aa9.82□□□□□ -0.84
CIT-211ENST00000541841 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
CIT-211ENST00000541841 PALM3A6NDB9 673 aaPredicted RBP9.81□□□□□ -0.84
CIT-211ENST00000541841 OIP5O43482 229 aa9.81□□□□□ -0.84
CIT-211ENST00000541841 CD33P20138 364 aa9.81□□□□□ -0.84
CIT-211ENST00000541841 NOS2P35228 1153 aa9.81□□□□□ -0.84
CIT-211ENST00000541841 ATP1A2P50993 1020 aa9.81□□□□□ -0.84
CIT-211ENST00000541841 BICDL1Q6ZP65 573 aa9.81□□□□□ -0.84
CIT-211ENST00000541841 CALR3Q96L12 384 aaKnown RBP9.81□□□□□ -0.84
CIT-211ENST00000541841 RNF225M0QZC1 329 aaPredicted RBP9.8□□□□□ -0.84
CIT-211ENST00000541841 KHNYNO15037 678 aaKnown RBP9.8□□□□□ -0.84
CIT-211ENST00000541841 DKK1O94907 266 aa9.8□□□□□ -0.84
CIT-211ENST00000541841 FIGNL1Q6PIW4 674 aa9.8□□□□□ -0.84
CIT-211ENST00000541841 NLRP8Q86W28 1048 aa9.8□□□□□ -0.84
CIT-211ENST00000541841 TMEM151AQ8N4L1 468 aa9.8□□□□□ -0.84
CIT-211ENST00000541841 ZDHHC3Q9NYG2 299 aa9.8□□□□□ -0.84
CIT-211ENST00000541841 A6NJR5 290 aa9.79□□□□□ -0.84
CIT-211ENST00000541841 MAPTP10636 758 aaKnown RBP9.79□□□□□ -0.84
CIT-211ENST00000541841 RASA1P20936 1047 aa9.79□□□□□ -0.84
CIT-211ENST00000541841 TEAD4Q15561 434 aa9.79□□□□□ -0.84
CIT-211ENST00000541841 GALNT6Q8NCL4 622 aa9.79□□□□□ -0.84
CIT-211ENST00000541841 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
CIT-211ENST00000541841 SCARF2Q96GP6 870 aaPredicted RBP9.79□□□□□ -0.84
CIT-211ENST00000541841 GJA3Q9Y6H8 435 aa9.79□□□□□ -0.84
CIT-211ENST00000541841 SNRPNP63162 240 aaKnown RBP9.78□□□□□ -0.84
CIT-211ENST00000541841 TNP2Q05952 138 aa9.78□□□□□ -0.84
CIT-211ENST00000541841 LRRC69Q6ZNQ3 347 aa9.78□□□□□ -0.84
CIT-211ENST00000541841 LARGE2Q8N3Y3 721 aa9.78□□□□□ -0.84
CIT-211ENST00000541841 STRN4Q9NRL3 753 aa9.78□□□□□ -0.84
CIT-211ENST00000541841 GGA1Q9UJY5 639 aa9.78□□□□□ -0.84
CIT-211ENST00000541841 SERTM1A2A2V5 107 aa9.77□□□□□ -0.85
CIT-211ENST00000541841 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
CIT-211ENST00000541841 SIX5Q8N196 739 aa9.77□□□□□ -0.85
CIT-211ENST00000541841 PPP1R12CQ9BZL4 782 aa9.77□□□□□ -0.85
CIT-211ENST00000541841 ZNF777Q9ULD5 760 aaPredicted RBP9.77□□□□□ -0.85
CIT-211ENST00000541841 HCN4Q9Y3Q4 1203 aa9.77□□□□□ -0.85
CIT-211ENST00000541841 DNMT3AQ9Y6K1 912 aaPredicted RBP9.77□□□□□ -0.85
CIT-211ENST00000541841 EML1O00423 815 aa9.76□□□□□ -0.85
CIT-211ENST00000541841 GRIN2CQ14957 1233 aa9.76□□□□□ -0.85
CIT-211ENST00000541841 EDARADDQ8WWZ3 215 aa9.76□□□□□ -0.85
CIT-211ENST00000541841 NEURL1BA8MQ27 555 aa9.75□□□□□ -0.85
CIT-211ENST00000541841 LMOD1P29536 600 aaPredicted RBP9.75□□□□□ -0.85
CIT-211ENST00000541841 RRAGCQ9HB90 399 aa9.75□□□□□ -0.85
CIT-211ENST00000541841 C21orf2O43822 256 aa9.74□□□□□ -0.85
CIT-211ENST00000541841 KANK4Q5T7N3 995 aaPredicted RBP9.74□□□□□ -0.85
CIT-211ENST00000541841 GOLGA6L1Q8N7Z2 621 aa9.74□□□□□ -0.85
CIT-211ENST00000541841 C7orf43Q8WVR3 580 aa9.74□□□□□ -0.85
CIT-211ENST00000541841 KLF15Q9UIH9 416 aa9.74□□□□□ -0.85
CIT-211ENST00000541841 PPP1R12BO60237 982 aaPredicted RBP9.73□□□□□ -0.85
CIT-211ENST00000541841 FAM157BP0CG42 384 aa9.73□□□□□ -0.85
CIT-211ENST00000541841 PSMA6P60900 246 aaKnown RBP9.73□□□□□ -0.85
CIT-211ENST00000541841 RHPN1Q8TCX5 695 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms