RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
NPIPA1-206ENST00000541836 PTGS1P23219 599 aa16.39■□□□□ 0.21
NPIPA1-206ENST00000541836 AK2P54819 239 aa16.39■□□□□ 0.21
NPIPA1-206ENST00000541836 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
NPIPA1-206ENST00000541836 ATP7BP35670 1465 aa16.38■□□□□ 0.21
NPIPA1-206ENST00000541836 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.38■□□□□ 0.21
NPIPA1-206ENST00000541836 MAP4K4O95819 1239 aaPredicted RBP16.38■□□□□ 0.21
NPIPA1-206ENST00000541836 NCBP1Q09161 790 aaKnown RBP16.37■□□□□ 0.21
NPIPA1-206ENST00000541836 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
NPIPA1-206ENST00000541836 CCDC192P0DO97 292 aa16.37■□□□□ 0.21
NPIPA1-206ENST00000541836 FEZ1Q99689 392 aa16.37■□□□□ 0.21
NPIPA1-206ENST00000541836 STAP2Q9UGK3 403 aa16.37■□□□□ 0.21
NPIPA1-206ENST00000541836 LIMCH1Q9UPQ0 1083 aa16.37■□□□□ 0.21
NPIPA1-206ENST00000541836 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
NPIPA1-206ENST00000541836 RUFY3Q7L099 469 aa16.36■□□□□ 0.21
NPIPA1-206ENST00000541836 ZNF771Q7L3S4 317 aaPredicted RBP16.36■□□□□ 0.21
NPIPA1-206ENST00000541836 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
NPIPA1-206ENST00000541836 CHMP3Q9Y3E7 222 aa16.36■□□□□ 0.21
NPIPA1-206ENST00000541836 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
NPIPA1-206ENST00000541836 AATKQ6ZMQ8 1374 aa16.36■□□□□ 0.21
NPIPA1-206ENST00000541836 PDE4CQ08493 712 aa16.36■□□□□ 0.21
NPIPA1-206ENST00000541836 EDC4Q6P2E9 1401 aaKnown RBP16.36■□□□□ 0.21
NPIPA1-206ENST00000541836 TTC14Q96N46 770 aa16.35■□□□□ 0.21
NPIPA1-206ENST00000541836 CPA1P15085 419 aa16.35■□□□□ 0.21
NPIPA1-206ENST00000541836 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
NPIPA1-206ENST00000541836 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
NPIPA1-206ENST00000541836 OGFRQ9NZT2 677 aa16.35■□□□□ 0.21
NPIPA1-206ENST00000541836 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
NPIPA1-206ENST00000541836 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 RAD50Q92878 1312 aa16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 LRMPQ12912 555 aa16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 ATP8B2P98198 1209 aa16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 CCDC186Q7Z3E2 898 aa16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 LUZP1Q86V48 1076 aa16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 CCDC83Q8IWF9 413 aa16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 DRC7Q8IY82 874 aa16.34■□□□□ 0.21
NPIPA1-206ENST00000541836 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.21
NPIPA1-206ENST00000541836 LARGE1O95461 756 aa16.33■□□□□ 0.21
NPIPA1-206ENST00000541836 GNAI3P08754 354 aa16.33■□□□□ 0.21
NPIPA1-206ENST00000541836 GJB2P29033 226 aa16.33■□□□□ 0.21
NPIPA1-206ENST00000541836 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.21
NPIPA1-206ENST00000541836 CAMK4Q16566 473 aa16.33■□□□□ 0.2
NPIPA1-206ENST00000541836 TSPYL4Q9UJ04 414 aa16.33■□□□□ 0.2
NPIPA1-206ENST00000541836 MTMR6Q9Y217 621 aa16.33■□□□□ 0.2
NPIPA1-206ENST00000541836 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.2
NPIPA1-206ENST00000541836 NCKAP5LQ9HCH0 1330 aa16.33■□□□□ 0.2
NPIPA1-206ENST00000541836 SGSM2O43147 1006 aa16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 CASTP20810 708 aaKnown RBP16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 NAA30Q147X3 362 aaPredicted RBP16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 CTNNA3Q9UI47 895 aa16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 STK31Q9BXU1 1019 aa16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 CGNQ9P2M7 1197 aaKnown RBP16.32■□□□□ 0.2
NPIPA1-206ENST00000541836 ALKQ9UM73 1620 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 SMTNL1A8MU46 457 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 TNNT1P13805 278 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 MAP3K11Q16584 847 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 NRBP1Q9UHY1 535 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 TYRO3Q06418 890 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 NUP62CLQ9H1M0 184 aa16.31■□□□□ 0.2
NPIPA1-206ENST00000541836 LSG1Q9H089 658 aaKnown RBP16.3■□□□□ 0.2
NPIPA1-206ENST00000541836 MRVI1Q9Y6F6 885 aa16.3■□□□□ 0.2
NPIPA1-206ENST00000541836 CWC27Q6UX04 472 aaKnown RBP16.3■□□□□ 0.2
NPIPA1-206ENST00000541836 CKAP2LQ8IYA6 745 aa16.3■□□□□ 0.2
NPIPA1-206ENST00000541836 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
NPIPA1-206ENST00000541836 AOX1Q06278 1338 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 CRB1P82279 1406 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 FOXO3O43524 673 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 FLIIQ13045 1269 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 CCDC112Q8NEF3 446 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 LIG1P18858 919 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 CPS1P31327 1500 aa16.29■□□□□ 0.2
NPIPA1-206ENST00000541836 WASLO00401 505 aaPredicted RBP16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 ANO6Q4KMQ2 910 aa16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 FERMT3Q86UX7 667 aa16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 SYCP1Q15431 976 aa16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 TAF3Q5VWG9 929 aa16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 ZSCAN25Q6NSZ9 544 aa16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 CBX8Q9HC52 389 aa16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 SOS1Q07889 1333 aaPredicted RBP16.28■□□□□ 0.2
NPIPA1-206ENST00000541836 SURF6O75683 361 aaKnown RBP16.27■□□□□ 0.2
NPIPA1-206ENST00000541836 GABPB1Q06547 395 aaPredicted RBP16.27■□□□□ 0.2
NPIPA1-206ENST00000541836 FAM173BQ6P4H8 233 aa16.27■□□□□ 0.2
NPIPA1-206ENST00000541836 PI4K2BQ8TCG2 481 aa16.27■□□□□ 0.2
NPIPA1-206ENST00000541836 ZNF592Q92610 1267 aa16.27■□□□□ 0.2
NPIPA1-206ENST00000541836 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.19
NPIPA1-206ENST00000541836 NUDT16Q96DE0 195 aaKnown RBP16.27■□□□□ 0.19
NPIPA1-206ENST00000541836 JAKMIP1Q96N16 626 aaKnown RBP16.27■□□□□ 0.19
NPIPA1-206ENST00000541836 TNMDQ9H2S6 317 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms