RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 NUTM2GQ5VZR2 741 aa12.15□□□□□ -0.46
LMO3-227ENST00000541764 ADAMTS7Q9UKP4 1686 aa12.15□□□□□ -0.46
LMO3-227ENST00000541764 PNMA6EA0A0J9YXQ4 647 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 UBTFL1P0CB47 393 aaPredicted RBP12.14□□□□□ -0.47
LMO3-227ENST00000541764 MX1P20591 662 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 MCM2P49736 904 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 MRE11P49959 708 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 PSME1Q06323 249 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 FAM43AQ8N2R8 423 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 ABCC6O95255 1503 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
LMO3-227ENST00000541764 MTX1Q13505 466 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
LMO3-227ENST00000541764 LRRFIP2Q9Y608 721 aaKnown RBP12.14□□□□□ -0.47
LMO3-227ENST00000541764 KIF1AQ12756 1690 aa12.13□□□□□ -0.47
LMO3-227ENST00000541764 TRPM3Q9HCF6 1732 aaPredicted RBP12.13□□□□□ -0.47
LMO3-227ENST00000541764 BEND3Q5T5X7 828 aa12.13□□□□□ -0.47
LMO3-227ENST00000541764 LTV1Q96GA3 475 aaPredicted RBP12.13□□□□□ -0.47
LMO3-227ENST00000541764 HDAC5Q9UQL6 1122 aa12.13□□□□□ -0.47
LMO3-227ENST00000541764 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
LMO3-227ENST00000541764 EXOC6BQ9Y2D4 811 aa12.13□□□□□ -0.47
LMO3-227ENST00000541764 USP42Q9H9J4 1324 aaKnown RBP12.13□□□□□ -0.47
LMO3-227ENST00000541764 GOLGA6L22H0YM25 854 aa12.12□□□□□ -0.47
LMO3-227ENST00000541764 ALDH1L1O75891 902 aa12.12□□□□□ -0.47
LMO3-227ENST00000541764 GCP02774 474 aa12.12□□□□□ -0.47
LMO3-227ENST00000541764 XRCC6P12956 609 aaKnown RBP eCLIP12.12□□□□□ -0.47
LMO3-227ENST00000541764 CHMLP26374 656 aa12.12□□□□□ -0.47
LMO3-227ENST00000541764 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
LMO3-227ENST00000541764 ESCO1Q5FWF5 840 aa12.12□□□□□ -0.47
LMO3-227ENST00000541764 DNAAF4Q8WXU2 420 aa12.12□□□□□ -0.47
LMO3-227ENST00000541764 RNMTO43148 476 aaKnown RBP12.11□□□□□ -0.47
LMO3-227ENST00000541764 MCCP23508 829 aa12.11□□□□□ -0.47
LMO3-227ENST00000541764 USHBP1Q8N6Y0 703 aa12.11□□□□□ -0.47
LMO3-227ENST00000541764 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
LMO3-227ENST00000541764 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
LMO3-227ENST00000541764 TEFQ10587 303 aa12.1□□□□□ -0.47
LMO3-227ENST00000541764 CUL4AQ13619 759 aa12.1□□□□□ -0.47
LMO3-227ENST00000541764 KLHL40Q2TBA0 621 aa12.1□□□□□ -0.47
LMO3-227ENST00000541764 ZNF530Q6P9A1 599 aaPredicted RBP12.1□□□□□ -0.47
LMO3-227ENST00000541764 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
LMO3-227ENST00000541764 KIF1BPQ96EK5 621 aa12.1□□□□□ -0.47
LMO3-227ENST00000541764 PHAXQ9H814 394 aaKnown RBP12.1□□□□□ -0.47
LMO3-227ENST00000541764 DBF4Q9UBU7 674 aaPredicted RBP12.1□□□□□ -0.47
LMO3-227ENST00000541764 SIPA1L3O60292 1781 aaPredicted RBP12.1□□□□□ -0.47
LMO3-227ENST00000541764 ADCY9O60503 1353 aa12.1□□□□□ -0.47
LMO3-227ENST00000541764 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
LMO3-227ENST00000541764 APBB1O00213 710 aa12.09□□□□□ -0.47
LMO3-227ENST00000541764 SSFA2P28290 1259 aa12.09□□□□□ -0.47
LMO3-227ENST00000541764 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
LMO3-227ENST00000541764 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
LMO3-227ENST00000541764 CRYBG1Q9Y4K1 1723 aa12.09□□□□□ -0.47
LMO3-227ENST00000541764 UTYO14607 1347 aa12.09□□□□□ -0.47
LMO3-227ENST00000541764 POTEIP0CG38 1075 aa12.08□□□□□ -0.47
LMO3-227ENST00000541764 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.47
LMO3-227ENST00000541764 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.47
LMO3-227ENST00000541764 C1orf167Q5SNV9 1468 aa12.08□□□□□ -0.48
LMO3-227ENST00000541764 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
LMO3-227ENST00000541764 RGPD2P0DJD1 1756 aa12.08□□□□□ -0.48
LMO3-227ENST00000541764 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
LMO3-227ENST00000541764 C1orf141Q5JVX7 400 aa12.08□□□□□ -0.48
LMO3-227ENST00000541764 PI4K2BQ8TCG2 481 aa12.08□□□□□ -0.48
LMO3-227ENST00000541764 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
LMO3-227ENST00000541764 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
LMO3-227ENST00000541764 GRPEL1Q9HAV7 217 aa12.08□□□□□ -0.48
LMO3-227ENST00000541764 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
LMO3-227ENST00000541764 DCCP43146 1447 aa12.07□□□□□ -0.48
LMO3-227ENST00000541764 ALS2Q96Q42 1657 aa12.07□□□□□ -0.48
LMO3-227ENST00000541764 PXDNQ92626 1479 aa12.07□□□□□ -0.48
LMO3-227ENST00000541764 PI4KAP2A4QPH2 592 aa12.07□□□□□ -0.48
LMO3-227ENST00000541764 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
LMO3-227ENST00000541764 PI4KAP1Q8N8J0 262 aa12.07□□□□□ -0.48
LMO3-227ENST00000541764 HYPKQ9NX55 129 aa12.07□□□□□ -0.48
LMO3-227ENST00000541764 KCNQ3O43525 872 aa12.06□□□□□ -0.48
LMO3-227ENST00000541764 SURF6O75683 361 aaKnown RBP12.06□□□□□ -0.48
LMO3-227ENST00000541764 EIF2S2P20042 333 aaKnown RBP12.06□□□□□ -0.48
LMO3-227ENST00000541764 LRRC59Q96AG4 307 aaKnown RBP12.06□□□□□ -0.48
LMO3-227ENST00000541764 ORAI2Q96SN7 254 aa12.06□□□□□ -0.48
LMO3-227ENST00000541764 C19orf44Q9H6X5 657 aa12.06□□□□□ -0.48
LMO3-227ENST00000541764 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
LMO3-227ENST00000541764 PLEKHG5O94827 1062 aa12.05□□□□□ -0.48
LMO3-227ENST00000541764 NBPF7P0C2Y1 421 aaPredicted RBP12.05□□□□□ -0.48
LMO3-227ENST00000541764 HSPA4P34932 840 aa12.05□□□□□ -0.48
LMO3-227ENST00000541764 KRT28Q7Z3Y7 464 aa12.05□□□□□ -0.48
LMO3-227ENST00000541764 ERC1Q8IUD2 1116 aa12.05□□□□□ -0.48
LMO3-227ENST00000541764 GZF1Q9H116 711 aaPredicted RBP12.05□□□□□ -0.48
LMO3-227ENST00000541764 LMBRD1Q9NUN5 540 aa12.05□□□□□ -0.48
LMO3-227ENST00000541764 ERBB3P21860 1342 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 TRIM6-TRIM34B2RNG4 842 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 SGSM2O43147 1006 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 NEK4P51957 841 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 ZNF445P59923 1031 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 MPRIPQ6WCQ1 1025 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 LINS1Q8NG48 757 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
LMO3-227ENST00000541764 ZDHHC9Q9Y397 364 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 RAD50Q92878 1312 aa12.04□□□□□ -0.48
LMO3-227ENST00000541764 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
LMO3-227ENST00000541764 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
LMO3-227ENST00000541764 CNTROBQ8N137 903 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms