RNA–Protein interactions for RNA: ENST00000541403.1

LAMTOR1-206, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 1, humanhuman

TSL 2

Gene LAMTOR1, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR1-206ENST00000541403 HSPA6P17066 643 aa23.63■■□□□ 1.37
LAMTOR1-206ENST00000541403 TGFB2P61812 414 aa23.63■■□□□ 1.37
LAMTOR1-206ENST00000541403 CCDC87Q9NVE4 849 aa23.63■■□□□ 1.37
LAMTOR1-206ENST00000541403 DNAJC10Q8IXB1 793 aa23.62■■□□□ 1.37
LAMTOR1-206ENST00000541403 TTC5Q8N0Z6 440 aa23.62■■□□□ 1.37
LAMTOR1-206ENST00000541403 SRP68Q9UHB9 627 aaKnown RBP23.62■■□□□ 1.37
LAMTOR1-206ENST00000541403 NEFMP07197 916 aa23.6■■□□□ 1.37
LAMTOR1-206ENST00000541403 RTF1Q92541 710 aaKnown RBP23.6■■□□□ 1.37
LAMTOR1-206ENST00000541403 PARP3Q9Y6F1 533 aa23.6■■□□□ 1.37
LAMTOR1-206ENST00000541403 ARHGAP27Q6ZUM4 889 aa23.59■■□□□ 1.37
LAMTOR1-206ENST00000541403 VSIG10Q8N0Z9 540 aa23.59■■□□□ 1.37
LAMTOR1-206ENST00000541403 INTS5Q6P9B9 1019 aaKnown RBP23.58■■□□□ 1.37
LAMTOR1-206ENST00000541403 ZNF790Q6PG37 636 aa23.58■■□□□ 1.37
LAMTOR1-206ENST00000541403 CYP19A1P11511 503 aaPredicted RBP23.57■■□□□ 1.36
LAMTOR1-206ENST00000541403 KCNA3P22001 575 aa23.57■■□□□ 1.36
LAMTOR1-206ENST00000541403 DDR1Q08345 913 aa23.57■■□□□ 1.36
LAMTOR1-206ENST00000541403 FKBP8Q14318 412 aa23.57■■□□□ 1.36
LAMTOR1-206ENST00000541403 MCM10Q7L590 875 aa23.57■■□□□ 1.36
LAMTOR1-206ENST00000541403 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
LAMTOR1-206ENST00000541403 USP42Q9H9J4 1324 aaKnown RBP23.57■■□□□ 1.36
LAMTOR1-206ENST00000541403 HEG1Q9ULI3 1381 aa23.56■■□□□ 1.36
LAMTOR1-206ENST00000541403 HTATSF1O43719 755 aaKnown RBP23.56■■□□□ 1.36
LAMTOR1-206ENST00000541403 ZNF496Q96IT1 587 aaPredicted RBP23.56■■□□□ 1.36
LAMTOR1-206ENST00000541403 ARFGEF1Q9Y6D6 1849 aa23.55■■□□□ 1.36
LAMTOR1-206ENST00000541403 BTBD11A6QL63 1104 aa23.55■■□□□ 1.36
LAMTOR1-206ENST00000541403 PNNQ9H307 717 aaKnown RBP23.55■■□□□ 1.36
LAMTOR1-206ENST00000541403 MAPK8IP3Q9UPT6 1336 aa23.55■■□□□ 1.36
LAMTOR1-206ENST00000541403 DCTN1Q14203 1278 aa23.54■■□□□ 1.36
LAMTOR1-206ENST00000541403 SOS1Q07889 1333 aaPredicted RBP23.54■■□□□ 1.36
LAMTOR1-206ENST00000541403 KDM3BQ7LBC6 1761 aa23.53■■□□□ 1.36
LAMTOR1-206ENST00000541403 ZBTB1Q9Y2K1 713 aa23.53■■□□□ 1.36
LAMTOR1-206ENST00000541403 COL15A1P39059 1388 aa23.52■■□□□ 1.36
LAMTOR1-206ENST00000541403 NFE2L2Q16236 605 aa23.52■■□□□ 1.36
LAMTOR1-206ENST00000541403 FMNL2Q96PY5 1086 aa23.52■■□□□ 1.36
LAMTOR1-206ENST00000541403 PRKRIP1Q9H875 184 aaPredicted RBP23.52■■□□□ 1.36
LAMTOR1-206ENST00000541403 NMRK2Q9NPI5 230 aa23.52■■□□□ 1.36
LAMTOR1-206ENST00000541403 KCNQ3O43525 872 aa23.51■■□□□ 1.35
LAMTOR1-206ENST00000541403 IFFO2Q5TF58 517 aa23.51■■□□□ 1.35
LAMTOR1-206ENST00000541403 LAMB4A4D0S4 1761 aa23.5■■□□□ 1.35
LAMTOR1-206ENST00000541403 STARD3NLO95772 234 aa23.5■■□□□ 1.35
LAMTOR1-206ENST00000541403 CHRNA5P30532 468 aa23.5■■□□□ 1.35
LAMTOR1-206ENST00000541403 C9orf131Q5VYM1 1079 aa23.5■■□□□ 1.35
LAMTOR1-206ENST00000541403 SCN7AQ01118 1682 aa23.49■■□□□ 1.35
LAMTOR1-206ENST00000541403 TEX13AQ9BXU3 409 aaPredicted RBP23.49■■□□□ 1.35
LAMTOR1-206ENST00000541403 PIM2Q9P1W9 311 aa23.49■■□□□ 1.35
LAMTOR1-206ENST00000541403 POLRMTO00411 1230 aaKnown RBP23.48■■□□□ 1.35
LAMTOR1-206ENST00000541403 USPL1Q5W0Q7 1092 aa23.48■■□□□ 1.35
LAMTOR1-206ENST00000541403 TOMM70O94826 608 aa23.47■■□□□ 1.35
LAMTOR1-206ENST00000541403 CANXP27824 592 aaKnown RBP23.47■■□□□ 1.35
LAMTOR1-206ENST00000541403 TM4SF1P30408 202 aa23.47■■□□□ 1.35
LAMTOR1-206ENST00000541403 DALRD3Q5D0E6 543 aaKnown RBP23.47■■□□□ 1.35
LAMTOR1-206ENST00000541403 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
LAMTOR1-206ENST00000541403 ZPR1O75312 459 aa23.46■■□□□ 1.35
LAMTOR1-206ENST00000541403 WDR43Q15061 677 aaKnown RBP eCLIP23.45■■□□□ 1.34
LAMTOR1-206ENST00000541403 TAF7Q15545 349 aaPredicted RBP23.45■■□□□ 1.34
LAMTOR1-206ENST00000541403 BCORQ6W2J9 1755 aa23.45■■□□□ 1.34
LAMTOR1-206ENST00000541403 NARFQ9UHQ1 456 aa23.44■■□□□ 1.34
LAMTOR1-206ENST00000541403 SBF1O95248 1867 aa23.43■■□□□ 1.34
LAMTOR1-206ENST00000541403 ZNF316A6NFI3 1004 aaPredicted RBP23.43■■□□□ 1.34
LAMTOR1-206ENST00000541403 EIF5P55010 431 aaKnown RBP23.43■■□□□ 1.34
LAMTOR1-206ENST00000541403 THUMPD2Q9BTF0 503 aaKnown RBP23.43■■□□□ 1.34
LAMTOR1-206ENST00000541403 RNF181Q9P0P0 153 aa23.43■■□□□ 1.34
LAMTOR1-206ENST00000541403 APLP1P51693 650 aa23.42■■□□□ 1.34
LAMTOR1-206ENST00000541403 NFIXQ14938 502 aa23.42■■□□□ 1.34
LAMTOR1-206ENST00000541403 NRXN2Q9P2S2 1712 aa23.42■■□□□ 1.34
LAMTOR1-206ENST00000541403 SNRPA1P09661 255 aaKnown RBP23.41■■□□□ 1.34
LAMTOR1-206ENST00000541403 CCDC146Q8IYE0 955 aa23.41■■□□□ 1.34
LAMTOR1-206ENST00000541403 PNISRQ8TF01 805 aaKnown RBP23.41■■□□□ 1.34
LAMTOR1-206ENST00000541403 BCL2L12Q9HB09 334 aa23.41■■□□□ 1.34
LAMTOR1-206ENST00000541403 MIS18AQ9NYP9 233 aa23.41■■□□□ 1.34
LAMTOR1-206ENST00000541403 A0A087WZG4 1122 aa23.4■■□□□ 1.34
LAMTOR1-206ENST00000541403 PRAMEF22A3QJZ6 481 aa23.4■■□□□ 1.34
LAMTOR1-206ENST00000541403 A1BGP04217 495 aa23.4■■□□□ 1.34
LAMTOR1-206ENST00000541403 IL6STP40189 918 aaPredicted RBP23.4■■□□□ 1.34
LAMTOR1-206ENST00000541403 RIPK4P57078 832 aa23.4■■□□□ 1.34
LAMTOR1-206ENST00000541403 ZNF330Q9Y3S2 320 aaPredicted RBP23.4■■□□□ 1.34
LAMTOR1-206ENST00000541403 USP16Q9Y5T5 823 aa23.4■■□□□ 1.34
LAMTOR1-206ENST00000541403 TMPOP42166 694 aaKnown RBP23.39■■□□□ 1.33
LAMTOR1-206ENST00000541403 RASSF7Q02833 373 aa23.39■■□□□ 1.33
LAMTOR1-206ENST00000541403 WDR90Q96KV7 1748 aa23.39■■□□□ 1.33
LAMTOR1-206ENST00000541403 DLEC1Q9Y238 1755 aa23.38■■□□□ 1.33
LAMTOR1-206ENST00000541403 LMOD3Q0VAK6 560 aa23.38■■□□□ 1.33
LAMTOR1-206ENST00000541403 DNAJC5GQ8N7S2 189 aa23.38■■□□□ 1.33
LAMTOR1-206ENST00000541403 RUNDC1Q96C34 613 aa23.37■■□□□ 1.33
LAMTOR1-206ENST00000541403 ADAMTS8Q9UP79 889 aa23.37■■□□□ 1.33
LAMTOR1-206ENST00000541403 SERPINB2P05120 415 aa23.36■■□□□ 1.33
LAMTOR1-206ENST00000541403 HTRA3P83110 453 aa23.36■■□□□ 1.33
LAMTOR1-206ENST00000541403 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
LAMTOR1-206ENST00000541403 C16orf71Q8IYS4 520 aaPredicted RBP23.36■■□□□ 1.33
LAMTOR1-206ENST00000541403 RBM46Q8TBY0 533 aaKnown RBP23.36■■□□□ 1.33
LAMTOR1-206ENST00000541403 RRP7AQ9Y3A4 280 aaKnown RBP23.36■■□□□ 1.33
LAMTOR1-206ENST00000541403 CARMIL3Q8ND23 1372 aa23.36■■□□□ 1.33
LAMTOR1-206ENST00000541403 RRAGCQ9HB90 399 aa23.35■■□□□ 1.33
LAMTOR1-206ENST00000541403 TNRC6CQ9HCJ0 1690 aaKnown RBP23.35■■□□□ 1.33
LAMTOR1-206ENST00000541403 KDM2BQ8NHM5 1336 aa23.34■■□□□ 1.33
LAMTOR1-206ENST00000541403 PIP4K2AP48426 406 aaPredicted RBP23.34■■□□□ 1.33
LAMTOR1-206ENST00000541403 PRELPP51888 382 aa23.34■■□□□ 1.33
LAMTOR1-206ENST00000541403 TBC1D2BQ9UPU7 963 aa23.34■■□□□ 1.33
LAMTOR1-206ENST00000541403 EIF4A1P60842 406 aaKnown RBP23.33■■□□□ 1.33
LAMTOR1-206ENST00000541403 NEUROD2Q15784 382 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms