RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CPLX2Q6PUV4 134 aaKnown RBP11.45□□□□□ -0.58
TTC39C-203ENST00000540918 ADCY10Q96PN6 1610 aa11.45□□□□□ -0.58
TTC39C-203ENST00000540918 CHL1O00533 1208 aa11.45□□□□□ -0.58
TTC39C-203ENST00000540918 ZNF790Q6PG37 636 aa11.45□□□□□ -0.58
TTC39C-203ENST00000540918 TBC1D2Q9BYX2 928 aa11.45□□□□□ -0.58
TTC39C-203ENST00000540918 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
TTC39C-203ENST00000540918 MAP3K5Q99683 1374 aa11.45□□□□□ -0.58
TTC39C-203ENST00000540918 PES1O00541 588 aaKnown RBP11.45□□□□□ -0.58
TTC39C-203ENST00000540918 ZBTB7BO15156 539 aaPredicted RBP11.45□□□□□ -0.58
TTC39C-203ENST00000540918 RABEP1Q15276 862 aa11.45□□□□□ -0.58
TTC39C-203ENST00000540918 SYAP1Q96A49 352 aaPredicted RBP11.45□□□□□ -0.58
TTC39C-203ENST00000540918 LRRIQ1Q96JM4 1722 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 ERICH2A1L162 156 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 GRM8O00222 908 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 NUP133Q8WUM0 1156 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 CWC25Q9NXE8 425 aaPredicted RBP11.44□□□□□ -0.58
TTC39C-203ENST00000540918 CYP46A1Q9Y6A2 500 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 USP19O94966 1318 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 PIK3R4Q99570 1358 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 TRAK2O60296 914 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 GLRX3O76003 335 aaKnown RBP11.44□□□□□ -0.58
TTC39C-203ENST00000540918 IGHMBP2P38935 993 aaKnown RBP11.44□□□□□ -0.58
TTC39C-203ENST00000540918 CEP85Q6P2H3 762 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 KSR2Q6VAB6 950 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 SETD1BQ9UPS6 1966 aaKnown RBP11.44□□□□□ -0.58
TTC39C-203ENST00000540918 MINDY4BA8MYZ0 360 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 K7ELQ4 463 aaPredicted RBP11.44□□□□□ -0.58
TTC39C-203ENST00000540918 TRIM34Q9BYJ4 488 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 LRRC2Q9BYS8 371 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 KIF3AQ9Y496 699 aa11.44□□□□□ -0.58
TTC39C-203ENST00000540918 PNMA6EA0A0J9YXQ4 647 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 RBM5P52756 815 aaKnown RBP eCLIP11.43□□□□□ -0.58
TTC39C-203ENST00000540918 NUCB1Q02818 461 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 ANKRD44Q8N8A2 993 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 BLOC1S2Q6QNY1 142 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 ANKIB1Q9P2G1 1089 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 HTATSF1O43719 755 aaKnown RBP11.43□□□□□ -0.58
TTC39C-203ENST00000540918 GUCY1B3Q02153 619 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 TRIM29Q14134 588 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 GDPD2Q9HCC8 539 aa11.43□□□□□ -0.58
TTC39C-203ENST00000540918 TRPM2O94759 1503 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 SBNO1A3KN83 1393 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 ZNF594Q96JF6 807 aaPredicted RBP11.42□□□□□ -0.58
TTC39C-203ENST00000540918 PDE1AP54750 535 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 DNAJC10Q8IXB1 793 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 ECHDC1Q9NTX5 307 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 TDO2P48775 406 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 TIMM10P62072 90 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 DCAF5Q96JK2 942 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 PLEKHF1Q96S99 279 aa11.42□□□□□ -0.58
TTC39C-203ENST00000540918 NUCB2P80303 420 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 SF3B2Q13435 895 aaKnown RBP11.41□□□□□ -0.58
TTC39C-203ENST00000540918 AMOTL1Q8IY63 956 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 ARHGAP45Q92619 1136 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 ABCC3O15438 1527 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 EFCAB6Q5THR3 1501 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 CDC42BPBQ9Y5S2 1711 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 PSMA5P28066 241 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
TTC39C-203ENST00000540918 PDRG1Q9NUG6 133 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 NIP7Q9Y221 180 aaKnown RBP eCLIP11.41□□□□□ -0.58
TTC39C-203ENST00000540918 ATP6V1DQ9Y5K8 247 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 KDM5CP41229 1560 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
TTC39C-203ENST00000540918 IKQ13123 557 aaPredicted RBP11.41□□□□□ -0.58
TTC39C-203ENST00000540918 PROSER3Q2NL68 480 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 HDAC1Q13547 482 aaPredicted RBP11.41□□□□□ -0.58
TTC39C-203ENST00000540918 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
TTC39C-203ENST00000540918 TTC22Q5TAA0 569 aa11.4□□□□□ -0.58
TTC39C-203ENST00000540918 HECW2Q9P2P5 1572 aa11.4□□□□□ -0.58
TTC39C-203ENST00000540918 CPA1P15085 419 aa11.4□□□□□ -0.58
TTC39C-203ENST00000540918 CCT2P78371 535 aaKnown RBP11.4□□□□□ -0.58
TTC39C-203ENST00000540918 ATP8B2P98198 1209 aa11.4□□□□□ -0.58
TTC39C-203ENST00000540918 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.58
TTC39C-203ENST00000540918 AIDAQ96BJ3 306 aa11.4□□□□□ -0.58
TTC39C-203ENST00000540918 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.59
TTC39C-203ENST00000540918 ANKRD18BA2A2Z9 1011 aa11.4□□□□□ -0.59
TTC39C-203ENST00000540918 LARP1BQ659C4 914 aaKnown RBP11.4□□□□□ -0.59
TTC39C-203ENST00000540918 DZIP3Q86Y13 1208 aaKnown RBP11.4□□□□□ -0.59
TTC39C-203ENST00000540918 NPC1L1Q9UHC9 1359 aa11.4□□□□□ -0.59
TTC39C-203ENST00000540918 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 LINS1Q8NG48 757 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 BRPF3Q9ULD4 1205 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 KIAA0232Q92628 1395 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 BMP2KLQ5H9B9 411 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.39□□□□□ -0.59
TTC39C-203ENST00000540918 BECN2A8MW95 431 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 C6orf229H3BNL8 230 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 CHST3Q7LGC8 479 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 ZSCAN29Q8IWY8 852 aaPredicted RBP11.39□□□□□ -0.59
TTC39C-203ENST00000540918 AK7Q96M32 723 aa11.39□□□□□ -0.59
TTC39C-203ENST00000540918 RFC4P35249 363 aa11.38□□□□□ -0.59
TTC39C-203ENST00000540918 GNL3LQ9NVN8 582 aaKnown RBP11.38□□□□□ -0.59
TTC39C-203ENST00000540918 SSFA2P28290 1259 aa11.38□□□□□ -0.59
TTC39C-203ENST00000540918 EIF4A1P60842 406 aaKnown RBP11.38□□□□□ -0.59
TTC39C-203ENST00000540918 PDE4CQ08493 712 aa11.38□□□□□ -0.59
TTC39C-203ENST00000540918 NBPF5PQ86XG9 351 aaPredicted RBP11.38□□□□□ -0.59
TTC39C-203ENST00000540918 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms