RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 SSH1Q8WYL5 1049 aa12.93□□□□□ -0.34
LMO3-224ENST00000540848 ARHGAP45Q92619 1136 aa12.93□□□□□ -0.34
LMO3-224ENST00000540848 PHACTR3Q96KR7 559 aa12.93□□□□□ -0.34
LMO3-224ENST00000540848 ANP32EQ9BTT0 268 aa12.93□□□□□ -0.34
LMO3-224ENST00000540848 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
LMO3-224ENST00000540848 NWD1Q149M9 1564 aa12.92□□□□□ -0.34
LMO3-224ENST00000540848 NPHP4O75161 1426 aaPredicted RBP12.92□□□□□ -0.34
LMO3-224ENST00000540848 RTL1A6NKG5 1358 aa12.92□□□□□ -0.34
LMO3-224ENST00000540848 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
LMO3-224ENST00000540848 WDR70Q9NW82 654 aa12.91□□□□□ -0.34
LMO3-224ENST00000540848 KDRP35968 1356 aa12.91□□□□□ -0.34
LMO3-224ENST00000540848 NUTM2FA1L443 756 aa12.9□□□□□ -0.34
LMO3-224ENST00000540848 GOLGA8CPA6NN73 597 aa12.9□□□□□ -0.34
LMO3-224ENST00000540848 RLBP1P12271 317 aa12.9□□□□□ -0.34
LMO3-224ENST00000540848 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
LMO3-224ENST00000540848 IPO9Q96P70 1041 aaKnown RBP12.9□□□□□ -0.34
LMO3-224ENST00000540848 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
LMO3-224ENST00000540848 TRIM27P14373 513 aa12.9□□□□□ -0.35
LMO3-224ENST00000540848 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.35
LMO3-224ENST00000540848 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.35
LMO3-224ENST00000540848 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
LMO3-224ENST00000540848 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
LMO3-224ENST00000540848 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
LMO3-224ENST00000540848 KIAA0232Q92628 1395 aa12.88□□□□□ -0.35
LMO3-224ENST00000540848 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
LMO3-224ENST00000540848 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
LMO3-224ENST00000540848 VIRMAQ69YN4 1812 aaKnown RBP12.87□□□□□ -0.35
LMO3-224ENST00000540848 MAP3K7O43318 606 aa12.87□□□□□ -0.35
LMO3-224ENST00000540848 VAMP4O75379 141 aa12.87□□□□□ -0.35
LMO3-224ENST00000540848 IGHDP01880 384 aa12.87□□□□□ -0.35
LMO3-224ENST00000540848 AMPHP49418 695 aa12.87□□□□□ -0.35
LMO3-224ENST00000540848 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
LMO3-224ENST00000540848 HSP90AB2PQ58FF8 381 aa12.87□□□□□ -0.35
LMO3-224ENST00000540848 MBIPQ9NS73 344 aa12.87□□□□□ -0.35
LMO3-224ENST00000540848 SEPT9Q9UHD8 586 aaPredicted RBP12.87□□□□□ -0.35
LMO3-224ENST00000540848 NOB1Q9ULX3 412 aaKnown RBP12.87□□□□□ -0.35
LMO3-224ENST00000540848 GAS2L2Q8NHY3 880 aa12.86□□□□□ -0.35
LMO3-224ENST00000540848 DDRGK1Q96HY6 314 aa12.86□□□□□ -0.35
LMO3-224ENST00000540848 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
LMO3-224ENST00000540848 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
LMO3-224ENST00000540848 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
LMO3-224ENST00000540848 LAS1LQ9Y4W2 734 aaKnown RBP12.86□□□□□ -0.35
LMO3-224ENST00000540848 KIF1AQ12756 1690 aa12.85□□□□□ -0.35
LMO3-224ENST00000540848 GRXCR2A6NFK2 248 aa12.85□□□□□ -0.35
LMO3-224ENST00000540848 TWISTNBQ3B726 338 aaPredicted RBP12.85□□□□□ -0.35
LMO3-224ENST00000540848 LAPTM4BQ86VI4 370 aa12.85□□□□□ -0.35
LMO3-224ENST00000540848 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
LMO3-224ENST00000540848 API5Q9BZZ5 524 aaKnown RBP12.85□□□□□ -0.35
LMO3-224ENST00000540848 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
LMO3-224ENST00000540848 CHL1O00533 1208 aa12.84□□□□□ -0.35
LMO3-224ENST00000540848 OSBPP22059 807 aa12.84□□□□□ -0.35
LMO3-224ENST00000540848 BCAMP50895 628 aa12.84□□□□□ -0.35
LMO3-224ENST00000540848 AEBP1Q8IUX7 1158 aa12.84□□□□□ -0.35
LMO3-224ENST00000540848 ABTB2Q8N961 1025 aa12.84□□□□□ -0.35
LMO3-224ENST00000540848 KCNH5Q8NCM2 988 aa12.84□□□□□ -0.35
LMO3-224ENST00000540848 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
LMO3-224ENST00000540848 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
LMO3-224ENST00000540848 SOS1Q07889 1333 aaPredicted RBP12.84□□□□□ -0.35
LMO3-224ENST00000540848 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.35
LMO3-224ENST00000540848 RTF1Q92541 710 aaKnown RBP12.83□□□□□ -0.36
LMO3-224ENST00000540848 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
LMO3-224ENST00000540848 HOXC9P31274 260 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 RGS3P49796 1198 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 TMEM57Q8N5G2 664 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 ANKK1Q8NFD2 765 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 THUMPD2Q9BTF0 503 aaKnown RBP12.82□□□□□ -0.36
LMO3-224ENST00000540848 BABAM1Q9NWV8 329 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 ABCC4O15439 1325 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 NFAT5O94916 1531 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 LRRC37A3O60309 1634 aa12.82□□□□□ -0.36
LMO3-224ENST00000540848 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
LMO3-224ENST00000540848 CRB1P82279 1406 aa12.81□□□□□ -0.36
LMO3-224ENST00000540848 MST1RQ04912 1400 aa12.81□□□□□ -0.36
LMO3-224ENST00000540848 LTN1O94822 1766 aa12.81□□□□□ -0.36
LMO3-224ENST00000540848 C3orf80F5H4A9 247 aa12.81□□□□□ -0.36
LMO3-224ENST00000540848 EYA1Q99502 592 aa12.81□□□□□ -0.36
LMO3-224ENST00000540848 DCCP43146 1447 aa12.81□□□□□ -0.36
LMO3-224ENST00000540848 SOWAHBA6NEL2 793 aa12.8□□□□□ -0.36
LMO3-224ENST00000540848 SLIT3O75094 1523 aa12.8□□□□□ -0.36
LMO3-224ENST00000540848 PTPRCP08575 1304 aa12.8□□□□□ -0.36
LMO3-224ENST00000540848 PSME1Q06323 249 aa12.8□□□□□ -0.36
LMO3-224ENST00000540848 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
LMO3-224ENST00000540848 IP6K1Q92551 441 aa12.8□□□□□ -0.36
LMO3-224ENST00000540848 FAM83GA6ND36 823 aa12.79□□□□□ -0.36
LMO3-224ENST00000540848 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
LMO3-224ENST00000540848 C8orf58Q8NAV2 365 aa12.79□□□□□ -0.36
LMO3-224ENST00000540848 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
LMO3-224ENST00000540848 ESCO1Q5FWF5 840 aa12.78□□□□□ -0.36
LMO3-224ENST00000540848 C14orf37Q86TY3 774 aa12.78□□□□□ -0.36
LMO3-224ENST00000540848 CHMP4AQ9BY43 222 aa12.78□□□□□ -0.36
LMO3-224ENST00000540848 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.36
LMO3-224ENST00000540848 MTHFSDQ2M296 383 aaKnown RBP12.77□□□□□ -0.36
LMO3-224ENST00000540848 MAP3K5Q99683 1374 aa12.77□□□□□ -0.37
LMO3-224ENST00000540848 CACNA1FO60840 1977 aa12.77□□□□□ -0.37
LMO3-224ENST00000540848 GNAT3A8MTJ3 354 aa12.77□□□□□ -0.37
LMO3-224ENST00000540848 ZBTB7BO15156 539 aaPredicted RBP12.77□□□□□ -0.37
LMO3-224ENST00000540848 DCTN1Q14203 1278 aa12.77□□□□□ -0.37
LMO3-224ENST00000540848 KCNV2Q8TDN2 545 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms