RNA–Protein interactions for RNA: ENST00000540554.1

FERMT3-203, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-203ENST00000540554 USPL1Q5W0Q7 1092 aa23.29■■□□□ 1.32
FERMT3-203ENST00000540554 PIM2Q9P1W9 311 aa23.29■■□□□ 1.32
FERMT3-203ENST00000540554 CYP19A1P11511 503 aaPredicted RBP23.28■■□□□ 1.32
FERMT3-203ENST00000540554 TNRC6CQ9HCJ0 1690 aaKnown RBP23.27■■□□□ 1.32
FERMT3-203ENST00000540554 NPC1L1Q9UHC9 1359 aa23.27■■□□□ 1.31
FERMT3-203ENST00000540554 ANKRD31Q8N7Z5 1873 aa23.26■■□□□ 1.31
FERMT3-203ENST00000540554 POLRMTO00411 1230 aaKnown RBP23.26■■□□□ 1.31
FERMT3-203ENST00000540554 HSPA6P17066 643 aa23.26■■□□□ 1.31
FERMT3-203ENST00000540554 TTC5Q8N0Z6 440 aa23.26■■□□□ 1.31
FERMT3-203ENST00000540554 ZBTB1Q9Y2K1 713 aa23.26■■□□□ 1.31
FERMT3-203ENST00000540554 TIAM2Q8IVF5 1701 aa23.25■■□□□ 1.31
FERMT3-203ENST00000540554 KIF3CO14782 793 aa23.25■■□□□ 1.31
FERMT3-203ENST00000540554 CHRNA5P30532 468 aa23.25■■□□□ 1.31
FERMT3-203ENST00000540554 DALRD3Q5D0E6 543 aaKnown RBP23.25■■□□□ 1.31
FERMT3-203ENST00000540554 KCNA3P22001 575 aa23.24■■□□□ 1.31
FERMT3-203ENST00000540554 BCORQ6W2J9 1755 aa23.24■■□□□ 1.31
FERMT3-203ENST00000540554 CANXP27824 592 aaKnown RBP23.23■■□□□ 1.31
FERMT3-203ENST00000540554 TEFQ10587 303 aa23.23■■□□□ 1.31
FERMT3-203ENST00000540554 VSIG10Q8N0Z9 540 aa23.23■■□□□ 1.31
FERMT3-203ENST00000540554 NARFQ9UHQ1 456 aa23.23■■□□□ 1.31
FERMT3-203ENST00000540554 TM4SF1P30408 202 aa23.22■■□□□ 1.31
FERMT3-203ENST00000540554 C9orf131Q5VYM1 1079 aa23.22■■□□□ 1.31
FERMT3-203ENST00000540554 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
FERMT3-203ENST00000540554 COL11A2P13942 1736 aaPredicted RBP23.22■■□□□ 1.31
FERMT3-203ENST00000540554 WDR90Q96KV7 1748 aa23.22■■□□□ 1.31
FERMT3-203ENST00000540554 DLG5Q8TDM6 1919 aa23.21■■□□□ 1.31
FERMT3-203ENST00000540554 NFIXQ14938 502 aa23.21■■□□□ 1.31
FERMT3-203ENST00000540554 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
FERMT3-203ENST00000540554 DICER1Q9UPY3 1922 aaKnown RBP23.2■■□□□ 1.3
FERMT3-203ENST00000540554 STARD3NLO95772 234 aa23.19■■□□□ 1.3
FERMT3-203ENST00000540554 CFAP53Q96M91 514 aa23.19■■□□□ 1.3
FERMT3-203ENST00000540554 NMRK2Q9NPI5 230 aa23.19■■□□□ 1.3
FERMT3-203ENST00000540554 ZNF330Q9Y3S2 320 aaPredicted RBP23.19■■□□□ 1.3
FERMT3-203ENST00000540554 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
FERMT3-203ENST00000540554 HEG1Q9ULI3 1381 aa23.17■■□□□ 1.3
FERMT3-203ENST00000540554 SERPINB2P05120 415 aa23.16■■□□□ 1.3
FERMT3-203ENST00000540554 BICDL1Q6ZP65 573 aa23.16■■□□□ 1.3
FERMT3-203ENST00000540554 IL17REQ8NFR9 667 aa23.16■■□□□ 1.3
FERMT3-203ENST00000540554 ZNF496Q96IT1 587 aaPredicted RBP23.16■■□□□ 1.3
FERMT3-203ENST00000540554 BCL2L12Q9HB09 334 aa23.16■■□□□ 1.3
FERMT3-203ENST00000540554 ARFGEF2Q9Y6D5 1785 aa23.16■■□□□ 1.3
FERMT3-203ENST00000540554 A0A087WZG4 1122 aa23.15■■□□□ 1.3
FERMT3-203ENST00000540554 TOMM70O94826 608 aa23.15■■□□□ 1.3
FERMT3-203ENST00000540554 PRKAR2BP31323 418 aa23.15■■□□□ 1.3
FERMT3-203ENST00000540554 ZNF790Q6PG37 636 aa23.15■■□□□ 1.3
FERMT3-203ENST00000540554 CARMIL3Q8ND23 1372 aa23.14■■□□□ 1.3
FERMT3-203ENST00000540554 FER1L6Q2WGJ9 1857 aa23.14■■□□□ 1.29
FERMT3-203ENST00000540554 C16orf71Q8IYS4 520 aaPredicted RBP23.14■■□□□ 1.29
FERMT3-203ENST00000540554 LAMB4A4D0S4 1761 aa23.14■■□□□ 1.29
FERMT3-203ENST00000540554 CEP350Q5VT06 3117 aa23.13■■□□□ 1.29
FERMT3-203ENST00000540554 KDM2BQ8NHM5 1336 aa23.13■■□□□ 1.29
FERMT3-203ENST00000540554 EIF5P55010 431 aaKnown RBP23.12■■□□□ 1.29
FERMT3-203ENST00000540554 RASSF7Q02833 373 aa23.12■■□□□ 1.29
FERMT3-203ENST00000540554 NPM2Q86SE8 214 aaKnown RBP23.12■■□□□ 1.29
FERMT3-203ENST00000540554 C2CD5Q86YS7 1000 aa23.12■■□□□ 1.29
FERMT3-203ENST00000540554 FMNL2Q96PY5 1086 aa23.12■■□□□ 1.29
FERMT3-203ENST00000540554 TEX13AQ9BXU3 409 aaPredicted RBP23.12■■□□□ 1.29
FERMT3-203ENST00000540554 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
FERMT3-203ENST00000540554 CEMIPQ8WUJ3 1361 aa23.11■■□□□ 1.29
FERMT3-203ENST00000540554 APLP1P51693 650 aa23.1■■□□□ 1.29
FERMT3-203ENST00000540554 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
FERMT3-203ENST00000540554 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
FERMT3-203ENST00000540554 BTBD11A6QL63 1104 aa23.09■■□□□ 1.29
FERMT3-203ENST00000540554 H0YIN7 160 aa23.09■■□□□ 1.29
FERMT3-203ENST00000540554 TBC1D9BQ66K14 1250 aa23.09■■□□□ 1.29
FERMT3-203ENST00000540554 TTLL6Q8N841 843 aa23.09■■□□□ 1.29
FERMT3-203ENST00000540554 TBC1D2BQ9UPU7 963 aa23.09■■□□□ 1.29
FERMT3-203ENST00000540554 SLX4Q8IY92 1834 aa23.08■■□□□ 1.29
FERMT3-203ENST00000540554 U2AF1L5P0DN76 240 aaPredicted RBP23.08■■□□□ 1.29
FERMT3-203ENST00000540554 U2AF1Q01081 240 aaKnown RBP eCLIP23.08■■□□□ 1.29
FERMT3-203ENST00000540554 NPHP1O15259 732 aa23.07■■□□□ 1.28
FERMT3-203ENST00000540554 A1BGP04217 495 aa23.07■■□□□ 1.28
FERMT3-203ENST00000540554 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
FERMT3-203ENST00000540554 RBM46Q8TBY0 533 aaKnown RBP23.07■■□□□ 1.28
FERMT3-203ENST00000540554 RTF1Q92541 710 aaKnown RBP23.07■■□□□ 1.28
FERMT3-203ENST00000540554 KCNQ3O43525 872 aa23.06■■□□□ 1.28
FERMT3-203ENST00000540554 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
FERMT3-203ENST00000540554 KDM3BQ7LBC6 1761 aa23.06■■□□□ 1.28
FERMT3-203ENST00000540554 CCDC24Q8N4L8 307 aa23.05■■□□□ 1.28
FERMT3-203ENST00000540554 ZNF622Q969S3 477 aaKnown RBP eCLIP23.05■■□□□ 1.28
FERMT3-203ENST00000540554 RRAGCQ9HB90 399 aa23.05■■□□□ 1.28
FERMT3-203ENST00000540554 NUP98P52948 1817 aa23.04■■□□□ 1.28
FERMT3-203ENST00000540554 LMNB1P20700 586 aa23.04■■□□□ 1.28
FERMT3-203ENST00000540554 ZC3H4Q9UPT8 1303 aaKnown RBP23.04■■□□□ 1.28
FERMT3-203ENST00000540554 PDE6BP35913 854 aa23.03■■□□□ 1.28
FERMT3-203ENST00000540554 PRR5LQ6MZQ0 368 aa23.03■■□□□ 1.28
FERMT3-203ENST00000540554 MCM10Q7L590 875 aa23.03■■□□□ 1.28
FERMT3-203ENST00000540554 ZNF219Q9P2Y4 722 aaPredicted RBP23.03■■□□□ 1.28
FERMT3-203ENST00000540554 PIP4K2AP48426 406 aaPredicted RBP23.02■■□□□ 1.28
FERMT3-203ENST00000540554 DZIP3Q86Y13 1208 aaKnown RBP23.02■■□□□ 1.28
FERMT3-203ENST00000540554 CNBD1Q8NA66 436 aa23.02■■□□□ 1.28
FERMT3-203ENST00000540554 SETDB2Q96T68 719 aa23.02■■□□□ 1.28
FERMT3-203ENST00000540554 CAMTA2O94983 1202 aa23.01■■□□□ 1.27
FERMT3-203ENST00000540554 BRIP1Q9BX63 1249 aa23.01■■□□□ 1.27
FERMT3-203ENST00000540554 ST5P78524 1137 aa23■■□□□ 1.27
FERMT3-203ENST00000540554 PDZRN3Q9UPQ7 1066 aa23■■□□□ 1.27
FERMT3-203ENST00000540554 USP16Q9Y5T5 823 aa23■■□□□ 1.27
FERMT3-203ENST00000540554 PRAMEF22A3QJZ6 481 aa22.99■■□□□ 1.27
FERMT3-203ENST00000540554 FSTL1Q12841 308 aa22.99■■□□□ 1.27
FERMT3-203ENST00000540554 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms