RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 TOMM70O94826 608 aa25.9■■□□□ 1.74
SOD2-212ENST00000540491 COL15A1P39059 1388 aa25.9■■□□□ 1.74
SOD2-212ENST00000540491 A0A087WZG4 1122 aa25.89■■□□□ 1.74
SOD2-212ENST00000540491 GNAT3A8MTJ3 354 aa25.89■■□□□ 1.74
SOD2-212ENST00000540491 TEFQ10587 303 aa25.89■■□□□ 1.74
SOD2-212ENST00000540491 ZBTB1Q9Y2K1 713 aa25.89■■□□□ 1.74
SOD2-212ENST00000540491 KCPQ6ZWJ8 1503 aa25.88■■□□□ 1.73
SOD2-212ENST00000540491 U2SURPO15042 1029 aaKnown RBP25.88■■□□□ 1.73
SOD2-212ENST00000540491 NFIXQ14938 502 aa25.87■■□□□ 1.73
SOD2-212ENST00000540491 C9orf131Q5VYM1 1079 aa25.87■■□□□ 1.73
SOD2-212ENST00000540491 CFAP53Q96M91 514 aa25.87■■□□□ 1.73
SOD2-212ENST00000540491 BRCA1P38398 1863 aaKnown RBP25.87■■□□□ 1.73
SOD2-212ENST00000540491 EIF5P55010 431 aaKnown RBP25.85■■□□□ 1.73
SOD2-212ENST00000540491 ZNF790Q6PG37 636 aa25.85■■□□□ 1.73
SOD2-212ENST00000540491 ARFGEF1Q9Y6D6 1849 aa25.85■■□□□ 1.73
SOD2-212ENST00000540491 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
SOD2-212ENST00000540491 IL17REQ8NFR9 667 aa25.84■■□□□ 1.73
SOD2-212ENST00000540491 PDZRN3Q9UPQ7 1066 aa25.84■■□□□ 1.73
SOD2-212ENST00000540491 KDM2BQ8NHM5 1336 aa25.84■■□□□ 1.73
SOD2-212ENST00000540491 SERPINB2P05120 415 aa25.83■■□□□ 1.73
SOD2-212ENST00000540491 CHRNA5P30532 468 aa25.83■■□□□ 1.73
SOD2-212ENST00000540491 NUDCQ9Y266 331 aa25.83■■□□□ 1.73
SOD2-212ENST00000540491 ZC3H4Q9UPT8 1303 aaKnown RBP25.83■■□□□ 1.73
SOD2-212ENST00000540491 CANXP27824 592 aaKnown RBP25.82■■□□□ 1.72
SOD2-212ENST00000540491 APLP1P51693 650 aa25.82■■□□□ 1.72
SOD2-212ENST00000540491 BCL2L12Q9HB09 334 aa25.82■■□□□ 1.72
SOD2-212ENST00000540491 HEG1Q9ULI3 1381 aa25.82■■□□□ 1.72
SOD2-212ENST00000540491 NPM2Q86SE8 214 aaKnown RBP25.81■■□□□ 1.72
SOD2-212ENST00000540491 ZNF496Q96IT1 587 aaPredicted RBP25.81■■□□□ 1.72
SOD2-212ENST00000540491 FMNL2Q96PY5 1086 aa25.81■■□□□ 1.72
SOD2-212ENST00000540491 RBM46Q8TBY0 533 aaKnown RBP25.8■■□□□ 1.72
SOD2-212ENST00000540491 RNF181Q9P0P0 153 aa25.8■■□□□ 1.72
SOD2-212ENST00000540491 CEMIPQ8WUJ3 1361 aa25.8■■□□□ 1.72
SOD2-212ENST00000540491 IL6STP40189 918 aaPredicted RBP25.79■■□□□ 1.72
SOD2-212ENST00000540491 C16orf71Q8IYS4 520 aaPredicted RBP25.79■■□□□ 1.72
SOD2-212ENST00000540491 UBR2Q8IWV8 1755 aa25.78■■□□□ 1.72
SOD2-212ENST00000540491 H0YIN7 160 aa25.78■■□□□ 1.72
SOD2-212ENST00000540491 TTLL6Q8N841 843 aa25.78■■□□□ 1.72
SOD2-212ENST00000540491 NMRK2Q9NPI5 230 aa25.78■■□□□ 1.72
SOD2-212ENST00000540491 VIRMAQ69YN4 1812 aaKnown RBP25.77■■□□□ 1.72
SOD2-212ENST00000540491 FSTL1Q12841 308 aa25.76■■□□□ 1.71
SOD2-212ENST00000540491 NRXN2Q9P2S2 1712 aa25.76■■□□□ 1.71
SOD2-212ENST00000540491 PRKAR2BP31323 418 aa25.75■■□□□ 1.71
SOD2-212ENST00000540491 RSPH6AQ9H0K4 717 aa25.75■■□□□ 1.71
SOD2-212ENST00000540491 BTBD11A6QL63 1104 aa25.74■■□□□ 1.71
SOD2-212ENST00000540491 PDE6BP35913 854 aa25.74■■□□□ 1.71
SOD2-212ENST00000540491 CNGB1Q14028 1251 aaPredicted RBP25.74■■□□□ 1.71
SOD2-212ENST00000540491 C2CD5Q86YS7 1000 aa25.74■■□□□ 1.71
SOD2-212ENST00000540491 BRIP1Q9BX63 1249 aa25.74■■□□□ 1.71
SOD2-212ENST00000540491 LMNB1P20700 586 aa25.73■■□□□ 1.71
SOD2-212ENST00000540491 RTF1Q92541 710 aaKnown RBP25.73■■□□□ 1.71
SOD2-212ENST00000540491 HTATSF1O43719 755 aaKnown RBP25.72■■□□□ 1.71
SOD2-212ENST00000540491 PHACTR3Q96KR7 559 aa25.72■■□□□ 1.71
SOD2-212ENST00000540491 CARMIL3Q8ND23 1372 aa25.71■■□□□ 1.71
SOD2-212ENST00000540491 U2AF1L5P0DN76 240 aaPredicted RBP25.7■■□□□ 1.7
SOD2-212ENST00000540491 U2AF1Q01081 240 aaKnown RBP eCLIP25.7■■□□□ 1.7
SOD2-212ENST00000540491 IFFO2Q5TF58 517 aa25.7■■□□□ 1.7
SOD2-212ENST00000540491 TBC1D9BQ66K14 1250 aa25.7■■□□□ 1.7
SOD2-212ENST00000540491 BICDL1Q6ZP65 573 aa25.7■■□□□ 1.7
SOD2-212ENST00000540491 SETDB2Q96T68 719 aa25.7■■□□□ 1.7
SOD2-212ENST00000540491 AFDNP55196 1824 aaKnown RBP25.7■■□□□ 1.7
SOD2-212ENST00000540491 TBC1D2BQ9UPU7 963 aa25.69■■□□□ 1.7
SOD2-212ENST00000540491 RGL2O15211 777 aa25.68■■□□□ 1.7
SOD2-212ENST00000540491 A1BGP04217 495 aa25.68■■□□□ 1.7
SOD2-212ENST00000540491 PPP2R1AP30153 589 aa25.68■■□□□ 1.7
SOD2-212ENST00000540491 CLEC4GQ6UXB4 293 aa25.68■■□□□ 1.7
SOD2-212ENST00000540491 ZNF330Q9Y3S2 320 aaPredicted RBP25.68■■□□□ 1.7
SOD2-212ENST00000540491 SNRPA1P09661 255 aaKnown RBP25.67■■□□□ 1.7
SOD2-212ENST00000540491 RRAGCQ9HB90 399 aa25.67■■□□□ 1.7
SOD2-212ENST00000540491 SIPA1L3O60292 1781 aaPredicted RBP25.67■■□□□ 1.7
SOD2-212ENST00000540491 GLTPD2A6NH11 291 aa25.66■■□□□ 1.7
SOD2-212ENST00000540491 CAMTA2O94983 1202 aa25.66■■□□□ 1.7
SOD2-212ENST00000540491 PRR5LQ6MZQ0 368 aa25.66■■□□□ 1.7
SOD2-212ENST00000540491 DNAJC5GQ8N7S2 189 aa25.66■■□□□ 1.7
SOD2-212ENST00000540491 DZIP3Q86Y13 1208 aaKnown RBP25.65■■□□□ 1.7
SOD2-212ENST00000540491 CNBD1Q8NA66 436 aa25.65■■□□□ 1.7
SOD2-212ENST00000540491 ZNF652Q9Y2D9 606 aa25.65■■□□□ 1.7
SOD2-212ENST00000540491 DLEC1Q9Y238 1755 aa25.64■■□□□ 1.7
SOD2-212ENST00000540491 SBF1O95248 1867 aa25.64■■□□□ 1.7
SOD2-212ENST00000540491 NPHP1O15259 732 aa25.64■■□□□ 1.7
SOD2-212ENST00000540491 VEGFAP15692 232 aaPredicted RBP25.64■■□□□ 1.7
SOD2-212ENST00000540491 ST5P78524 1137 aa25.64■■□□□ 1.7
SOD2-212ENST00000540491 RASSF7Q02833 373 aa25.64■■□□□ 1.7
SOD2-212ENST00000540491 SMC1BQ8NDV3 1235 aa25.64■■□□□ 1.7
SOD2-212ENST00000540491 CNKSR1Q969H4 720 aa25.64■■□□□ 1.7
SOD2-212ENST00000540491 ZNF622Q969S3 477 aaKnown RBP eCLIP25.64■■□□□ 1.7
SOD2-212ENST00000540491 NEFMP07197 916 aa25.63■■□□□ 1.69
SOD2-212ENST00000540491 SOGA3Q5TF21 947 aa25.63■■□□□ 1.69
SOD2-212ENST00000540491 USP16Q9Y5T5 823 aa25.63■■□□□ 1.69
SOD2-212ENST00000540491 KCNQ3O43525 872 aa25.62■■□□□ 1.69
SOD2-212ENST00000540491 STYK1Q6J9G0 422 aa25.62■■□□□ 1.69
SOD2-212ENST00000540491 DPY19L2Q6NUT2 758 aa25.62■■□□□ 1.69
SOD2-212ENST00000540491 SCN7AQ01118 1682 aa25.61■■□□□ 1.69
SOD2-212ENST00000540491 NFKBIEO00221 500 aa25.61■■□□□ 1.69
SOD2-212ENST00000540491 TNRC6CQ9HCJ0 1690 aaKnown RBP25.61■■□□□ 1.69
SOD2-212ENST00000540491 TAF7Q15545 349 aaPredicted RBP25.6■■□□□ 1.69
SOD2-212ENST00000540491 LTBP3Q9NS15 1303 aa25.6■■□□□ 1.69
SOD2-212ENST00000540491 MCM10Q7L590 875 aa25.59■■□□□ 1.69
SOD2-212ENST00000540491 MASTLQ96GX5 879 aa25.59■■□□□ 1.69
SOD2-212ENST00000540491 SRGNP10124 158 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms