RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ZBTB1Q9Y2K1 713 aa17.55■□□□□ 0.4
SEMA4D-223ENST00000540475 ADCY9O60503 1353 aa17.54■□□□□ 0.4
SEMA4D-223ENST00000540475 KCNA3P22001 575 aa17.54■□□□□ 0.4
SEMA4D-223ENST00000540475 DDR1Q08345 913 aa17.54■□□□□ 0.4
SEMA4D-223ENST00000540475 TTC5Q8N0Z6 440 aa17.54■□□□□ 0.4
SEMA4D-223ENST00000540475 DLG5Q8TDM6 1919 aa17.54■□□□□ 0.4
SEMA4D-223ENST00000540475 COL15A1P39059 1388 aa17.53■□□□□ 0.4
SEMA4D-223ENST00000540475 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
SEMA4D-223ENST00000540475 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
SEMA4D-223ENST00000540475 STARD3NLO95772 234 aa17.53■□□□□ 0.4
SEMA4D-223ENST00000540475 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
SEMA4D-223ENST00000540475 EIF5P55010 431 aaKnown RBP17.53■□□□□ 0.4
SEMA4D-223ENST00000540475 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEMA4D-223ENST00000540475 A0A0G2JLW4 131 aa17.52■□□□□ 0.4
SEMA4D-223ENST00000540475 ZPR1O75312 459 aa17.52■□□□□ 0.4
SEMA4D-223ENST00000540475 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
SEMA4D-223ENST00000540475 BCL2L12Q9HB09 334 aa17.52■□□□□ 0.4
SEMA4D-223ENST00000540475 DPEP1P16444 411 aa17.51■□□□□ 0.39
SEMA4D-223ENST00000540475 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
SEMA4D-223ENST00000540475 BTBD11A6QL63 1104 aa17.5■□□□□ 0.39
SEMA4D-223ENST00000540475 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
SEMA4D-223ENST00000540475 IL6STP40189 918 aaPredicted RBP17.49■□□□□ 0.39
SEMA4D-223ENST00000540475 C1QTNF8P60827 252 aa17.49■□□□□ 0.39
SEMA4D-223ENST00000540475 PLEKHF1Q96S99 279 aa17.49■□□□□ 0.39
SEMA4D-223ENST00000540475 SCN7AQ01118 1682 aa17.48■□□□□ 0.39
SEMA4D-223ENST00000540475 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
SEMA4D-223ENST00000540475 A0A087WZG4 1122 aa17.48■□□□□ 0.39
SEMA4D-223ENST00000540475 KCNQ3O43525 872 aa17.48■□□□□ 0.39
SEMA4D-223ENST00000540475 NFIXQ14938 502 aa17.48■□□□□ 0.39
SEMA4D-223ENST00000540475 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-223ENST00000540475 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-223ENST00000540475 BCORQ6W2J9 1755 aa17.46■□□□□ 0.39
SEMA4D-223ENST00000540475 MCM10Q7L590 875 aa17.46■□□□□ 0.39
SEMA4D-223ENST00000540475 PIM2Q9P1W9 311 aa17.46■□□□□ 0.39
SEMA4D-223ENST00000540475 WWC3Q9ULE0 1092 aa17.46■□□□□ 0.39
SEMA4D-223ENST00000540475 BCS1LQ9Y276 419 aa17.46■□□□□ 0.39
SEMA4D-223ENST00000540475 SBF1O95248 1867 aa17.46■□□□□ 0.38
SEMA4D-223ENST00000540475 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
SEMA4D-223ENST00000540475 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
SEMA4D-223ENST00000540475 GIGYF1O75420 1035 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-223ENST00000540475 A1BGP04217 495 aa17.44■□□□□ 0.38
SEMA4D-223ENST00000540475 RALBP1Q15311 655 aa17.44■□□□□ 0.38
SEMA4D-223ENST00000540475 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
SEMA4D-223ENST00000540475 SERPINB2P05120 415 aa17.43■□□□□ 0.38
SEMA4D-223ENST00000540475 SNRPA1P09661 255 aaKnown RBP17.43■□□□□ 0.38
SEMA4D-223ENST00000540475 DCTN1Q14203 1278 aa17.43■□□□□ 0.38
SEMA4D-223ENST00000540475 TAF7Q15545 349 aaPredicted RBP17.43■□□□□ 0.38
SEMA4D-223ENST00000540475 DALRD3Q5D0E6 543 aaKnown RBP17.42■□□□□ 0.38
SEMA4D-223ENST00000540475 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
SEMA4D-223ENST00000540475 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
SEMA4D-223ENST00000540475 RGL2O15211 777 aa17.41■□□□□ 0.38
SEMA4D-223ENST00000540475 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
SEMA4D-223ENST00000540475 CHRNA5P30532 468 aa17.41■□□□□ 0.38
SEMA4D-223ENST00000540475 CEP350Q5VT06 3117 aa17.4■□□□□ 0.38
SEMA4D-223ENST00000540475 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
SEMA4D-223ENST00000540475 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
SEMA4D-223ENST00000540475 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
SEMA4D-223ENST00000540475 ARHGAP27Q6ZUM4 889 aa17.4■□□□□ 0.38
SEMA4D-223ENST00000540475 GPBP1L1Q9HC44 474 aaPredicted RBP17.4■□□□□ 0.38
SEMA4D-223ENST00000540475 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
SEMA4D-223ENST00000540475 NEFMP07197 916 aa17.39■□□□□ 0.37
SEMA4D-223ENST00000540475 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
SEMA4D-223ENST00000540475 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
SEMA4D-223ENST00000540475 CLEC4GQ6UXB4 293 aa17.38■□□□□ 0.37
SEMA4D-223ENST00000540475 CARMIL3Q8ND23 1372 aa17.38■□□□□ 0.37
SEMA4D-223ENST00000540475 NBPF26B4DH59 902 aa17.37■□□□□ 0.37
SEMA4D-223ENST00000540475 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
SEMA4D-223ENST00000540475 NBPF10Q6P3W6 841 aaKnown RBP17.37■□□□□ 0.37
SEMA4D-223ENST00000540475 NBPF15Q8N660 670 aa17.37■□□□□ 0.37
SEMA4D-223ENST00000540475 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
SEMA4D-223ENST00000540475 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
SEMA4D-223ENST00000540475 COL11A2P13942 1736 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-223ENST00000540475 PRR5LQ6MZQ0 368 aa17.36■□□□□ 0.37
SEMA4D-223ENST00000540475 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
SEMA4D-223ENST00000540475 KIF3CO14782 793 aa17.35■□□□□ 0.37
SEMA4D-223ENST00000540475 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
SEMA4D-223ENST00000540475 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
SEMA4D-223ENST00000540475 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
SEMA4D-223ENST00000540475 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-223ENST00000540475 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
SEMA4D-223ENST00000540475 H0YIN7 160 aa17.34■□□□□ 0.37
SEMA4D-223ENST00000540475 NUP98P52948 1817 aa17.34■□□□□ 0.37
SEMA4D-223ENST00000540475 EIF4A1P60842 406 aaKnown RBP17.34■□□□□ 0.37
SEMA4D-223ENST00000540475 FER1L6Q2WGJ9 1857 aa17.34■□□□□ 0.37
SEMA4D-223ENST00000540475 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
SEMA4D-223ENST00000540475 C2CD5Q86YS7 1000 aa17.34■□□□□ 0.37
SEMA4D-223ENST00000540475 TTLL6Q8N841 843 aa17.34■□□□□ 0.37
SEMA4D-223ENST00000540475 MAPK8IP3Q9UPT6 1336 aa17.33■□□□□ 0.36
SEMA4D-223ENST00000540475 PDE6BP35913 854 aa17.33■□□□□ 0.36
SEMA4D-223ENST00000540475 C9orf131Q5VYM1 1079 aa17.33■□□□□ 0.36
SEMA4D-223ENST00000540475 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
SEMA4D-223ENST00000540475 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
SEMA4D-223ENST00000540475 DICER1Q9UPY3 1922 aaKnown RBP17.33■□□□□ 0.36
SEMA4D-223ENST00000540475 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-223ENST00000540475 ZNF526Q8TF50 670 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-223ENST00000540475 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
SEMA4D-223ENST00000540475 SENP3-EIF4A1A0A087X0R7 540 aa17.31■□□□□ 0.36
SEMA4D-223ENST00000540475 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
SEMA4D-223ENST00000540475 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
SEMA4D-223ENST00000540475 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms