RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 CACNA1FO60840 1977 aa15.1■□□□□ 0.01
NEK6-213ENST00000540326 SLIT1O75093 1534 aa15.09■□□□□ 0.01
NEK6-213ENST00000540326 ZSCAN30Q86W11 494 aa15.09■□□□□ 0.01
NEK6-213ENST00000540326 RHPN1Q8TCX5 695 aa15.09■□□□□ 0.01
NEK6-213ENST00000540326 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
NEK6-213ENST00000540326 CHPF2Q9P2E5 772 aa15.09■□□□□ 0.01
NEK6-213ENST00000540326 ARHGAP23Q9P227 1491 aa15.09■□□□□ 0.01
NEK6-213ENST00000540326 THEMISQ8N1K5 641 aaPredicted RBP15.09■□□□□ 0.01
NEK6-213ENST00000540326 BABAM1Q9NWV8 329 aa15.09■□□□□ 0.01
NEK6-213ENST00000540326 PXDNLA1KZ92 1463 aa15.08■□□□□ 0.01
NEK6-213ENST00000540326 PI4KAP2A4QPH2 592 aa15.08■□□□□ 0
NEK6-213ENST00000540326 KCNQ3O43525 872 aa15.08■□□□□ 0
NEK6-213ENST00000540326 NBPF6Q5VWK0 638 aa15.08■□□□□ 0
NEK6-213ENST00000540326 PI4KAP1Q8N8J0 262 aa15.08■□□□□ 0
NEK6-213ENST00000540326 PI4K2BQ8TCG2 481 aa15.08■□□□□ 0
NEK6-213ENST00000540326 INTS4Q96HW7 963 aaKnown RBP15.08■□□□□ 0
NEK6-213ENST00000540326 NBPF4Q96M43 638 aa15.08■□□□□ 0
NEK6-213ENST00000540326 MARF1Q9Y4F3 1742 aaKnown RBP15.08■□□□□ 0
NEK6-213ENST00000540326 LRSAM1Q6UWE0 723 aa15.08■□□□□ 0
NEK6-213ENST00000540326 GDPD2Q9HCC8 539 aa15.08■□□□□ 0
NEK6-213ENST00000540326 MSNP26038 577 aaKnown RBP15.07■□□□□ 0
NEK6-213ENST00000540326 HSPA4P34932 840 aa15.07■□□□□ 0
NEK6-213ENST00000540326 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
NEK6-213ENST00000540326 POLA2Q14181 598 aa15.07■□□□□ 0
NEK6-213ENST00000540326 AOX1Q06278 1338 aa15.07■□□□□ 0
NEK6-213ENST00000540326 RAB11FIP3O75154 756 aa15.07■□□□□ 0
NEK6-213ENST00000540326 LARP6Q9BRS8 491 aaKnown RBP15.07■□□□□ 0
NEK6-213ENST00000540326 RNF214Q8ND24 703 aa15.06■□□□□ 0
NEK6-213ENST00000540326 MBD3O95983 291 aa15.06■□□□□ 0
NEK6-213ENST00000540326 DNAAF4Q8WXU2 420 aa15.06■□□□□ 0
NEK6-213ENST00000540326 KIF1BPQ96EK5 621 aa15.06■□□□□ 0
NEK6-213ENST00000540326 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
NEK6-213ENST00000540326 ANKARQ7Z5J8 1434 aa15.05■□□□□ 0
NEK6-213ENST00000540326 BEND3Q5T5X7 828 aa15.05■□□□□ 0
NEK6-213ENST00000540326 CWC27Q6UX04 472 aaKnown RBP15.05■□□□□ 0
NEK6-213ENST00000540326 SGSM2O43147 1006 aa15.05■□□□□ -0
NEK6-213ENST00000540326 LRRC59Q96AG4 307 aaKnown RBP15.05■□□□□ -0
NEK6-213ENST00000540326 PDLIM2Q96JY6 352 aa15.05■□□□□ -0
NEK6-213ENST00000540326 SPG7Q9UQ90 795 aa15.05■□□□□ -0
NEK6-213ENST00000540326 N4BP2Q86UW6 1770 aaPredicted RBP15.04■□□□□ -0
NEK6-213ENST00000540326 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
NEK6-213ENST00000540326 RASEFQ8IZ41 740 aa15.04■□□□□ -0
NEK6-213ENST00000540326 IP6K1Q92551 441 aa15.04■□□□□ -0
NEK6-213ENST00000540326 PHF8Q9UPP1 1060 aa15.04■□□□□ -0
NEK6-213ENST00000540326 GADD45BO75293 160 aaPredicted RBP15.04■□□□□ -0
NEK6-213ENST00000540326 OS9Q13438 667 aaPredicted RBP15.04■□□□□ -0
NEK6-213ENST00000540326 TPRNQ4KMQ1 711 aa15.04■□□□□ -0
NEK6-213ENST00000540326 IL17RAQ96F46 866 aa15.04■□□□□ -0
NEK6-213ENST00000540326 SNX14Q9Y5W7 946 aa15.04■□□□□ -0
NEK6-213ENST00000540326 RAD50Q92878 1312 aa15.04■□□□□ -0
NEK6-213ENST00000540326 BTBD11A6QL63 1104 aa15.03■□□□□ -0
NEK6-213ENST00000540326 TEFQ10587 303 aa15.03■□□□□ -0
NEK6-213ENST00000540326 CNTROBQ8N137 903 aa15.03■□□□□ -0
NEK6-213ENST00000540326 LTN1O94822 1766 aa15.03■□□□□ -0
NEK6-213ENST00000540326 DTNBO60941 627 aa15.02■□□□□ -0
NEK6-213ENST00000540326 CPA1P15085 419 aa15.02■□□□□ -0
NEK6-213ENST00000540326 LSG1Q9H089 658 aaKnown RBP15.02■□□□□ -0
NEK6-213ENST00000540326 ZNF530Q6P9A1 599 aaPredicted RBP15.02□□□□□ -0.01
NEK6-213ENST00000540326 KIAA1211Q6ZU35 1233 aa15.02□□□□□ -0.01
NEK6-213ENST00000540326 USP48Q86UV5 1035 aa15.02□□□□□ -0.01
NEK6-213ENST00000540326 ADCY9O60503 1353 aa15.01□□□□□ -0.01
NEK6-213ENST00000540326 WDR33Q9C0J8 1336 aaKnown RBP15.01□□□□□ -0.01
NEK6-213ENST00000540326 AK2P54819 239 aa15.01□□□□□ -0.01
NEK6-213ENST00000540326 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.01□□□□□ -0.01
NEK6-213ENST00000540326 NOL7Q9UMY1 257 aaKnown RBP15.01□□□□□ -0.01
NEK6-213ENST00000540326 TCHHQ07283 1943 aa15.01□□□□□ -0.01
NEK6-213ENST00000540326 EPB41L2O43491 1005 aaKnown RBP15□□□□□ -0.01
NEK6-213ENST00000540326 HOXB7P09629 217 aa15□□□□□ -0.01
NEK6-213ENST00000540326 PSME1Q06323 249 aa15□□□□□ -0.01
NEK6-213ENST00000540326 PROSER3Q2NL68 480 aa15□□□□□ -0.01
NEK6-213ENST00000540326 HS1BP3Q53T59 392 aa15□□□□□ -0.01
NEK6-213ENST00000540326 ESCO1Q5FWF5 840 aa15□□□□□ -0.01
NEK6-213ENST00000540326 TTC14Q96N46 770 aa15□□□□□ -0.01
NEK6-213ENST00000540326 C9orf78Q9NZ63 289 aaPredicted RBP15□□□□□ -0.01
NEK6-213ENST00000540326 PA2G4Q9UQ80 394 aaKnown RBP15□□□□□ -0.01
NEK6-213ENST00000540326 RPAP1Q9BWH6 1393 aaPredicted RBP15□□□□□ -0.01
NEK6-213ENST00000540326 PRAMEF22A3QJZ6 481 aa14.99□□□□□ -0.01
NEK6-213ENST00000540326 CASTP20810 708 aaKnown RBP14.99□□□□□ -0.01
NEK6-213ENST00000540326 RUFY3Q7L099 469 aa14.99□□□□□ -0.01
NEK6-213ENST00000540326 MAP3K2Q9Y2U5 619 aa14.99□□□□□ -0.01
NEK6-213ENST00000540326 OFD1O75665 1012 aa14.99□□□□□ -0.01
NEK6-213ENST00000540326 CWF19L2Q2TBE0 894 aaKnown RBP14.99□□□□□ -0.01
NEK6-213ENST00000540326 HSP90AB4PQ58FF6 505 aa14.99□□□□□ -0.01
NEK6-213ENST00000540326 TSPY26PQ9H489 355 aa14.99□□□□□ -0.01
NEK6-213ENST00000540326 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
NEK6-213ENST00000540326 GLRX3O76003 335 aaKnown RBP14.98□□□□□ -0.01
NEK6-213ENST00000540326 XPCQ01831 940 aaPredicted RBP14.98□□□□□ -0.01
NEK6-213ENST00000540326 AKAP4Q5JQC9 854 aa14.98□□□□□ -0.01
NEK6-213ENST00000540326 CLASRPQ8N2M8 674 aaKnown RBP14.98□□□□□ -0.01
NEK6-213ENST00000540326 SYAP1Q96A49 352 aaPredicted RBP14.98□□□□□ -0.01
NEK6-213ENST00000540326 DBF4Q9UBU7 674 aaPredicted RBP14.98□□□□□ -0.01
NEK6-213ENST00000540326 CNPY2Q9Y2B0 182 aa14.98□□□□□ -0.01
NEK6-213ENST00000540326 RGPD2P0DJD1 1756 aa14.98□□□□□ -0.01
NEK6-213ENST00000540326 PTH1RQ03431 593 aa14.98□□□□□ -0.01
NEK6-213ENST00000540326 HSP90AA2PQ14568 343 aaPredicted RBP14.98□□□□□ -0.01
NEK6-213ENST00000540326 LIMCH1Q9UPQ0 1083 aa14.98□□□□□ -0.01
NEK6-213ENST00000540326 MED1Q15648 1581 aaPredicted RBP14.98□□□□□ -0.01
NEK6-213ENST00000540326 USP54Q70EL1 1684 aa14.97□□□□□ -0.01
NEK6-213ENST00000540326 LARGE1O95461 756 aa14.97□□□□□ -0.01
NEK6-213ENST00000540326 SYT1P21579 422 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms