RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 MAP2K2P36507 400 aa15.44■□□□□ 0.06
TMEM109-203ENST00000540280 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
TMEM109-203ENST00000540280 TTLL6Q8N841 843 aa15.44■□□□□ 0.06
TMEM109-203ENST00000540280 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
TMEM109-203ENST00000540280 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
TMEM109-203ENST00000540280 ADRA2BP18089 450 aa15.43■□□□□ 0.06
TMEM109-203ENST00000540280 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
TMEM109-203ENST00000540280 CD163L1Q9NR16 1453 aa15.43■□□□□ 0.06
TMEM109-203ENST00000540280 COL6A3P12111 3177 aa15.42■□□□□ 0.06
TMEM109-203ENST00000540280 POLRMTO00411 1230 aaKnown RBP15.42■□□□□ 0.06
TMEM109-203ENST00000540280 L3MBTL2Q969R5 705 aa15.42■□□□□ 0.06
TMEM109-203ENST00000540280 NBPF6Q5VWK0 638 aa15.41■□□□□ 0.06
TMEM109-203ENST00000540280 NBPF4Q96M43 638 aa15.41■□□□□ 0.06
TMEM109-203ENST00000540280 CGNL1Q0VF96 1302 aa15.41■□□□□ 0.06
TMEM109-203ENST00000540280 KDRP35968 1356 aa15.4■□□□□ 0.06
TMEM109-203ENST00000540280 CIAPIN1Q6FI81 312 aa15.4■□□□□ 0.06
TMEM109-203ENST00000540280 RAPGEF4Q8WZA2 1011 aa15.4■□□□□ 0.06
TMEM109-203ENST00000540280 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
TMEM109-203ENST00000540280 EPHX2P34913 555 aa15.39■□□□□ 0.05
TMEM109-203ENST00000540280 BRPF1P55201 1214 aaPredicted RBP15.39■□□□□ 0.05
TMEM109-203ENST00000540280 SLC4A9Q96Q91 983 aa15.39■□□□□ 0.05
TMEM109-203ENST00000540280 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
TMEM109-203ENST00000540280 RPS6KA4O75676 772 aa15.38■□□□□ 0.05
TMEM109-203ENST00000540280 TATP17735 454 aaPredicted RBP15.38■□□□□ 0.05
TMEM109-203ENST00000540280 HOXC9P31274 260 aa15.38■□□□□ 0.05
TMEM109-203ENST00000540280 HACL1Q9UJ83 578 aa15.38■□□□□ 0.05
TMEM109-203ENST00000540280 TLL2Q9Y6L7 1015 aa15.38■□□□□ 0.05
TMEM109-203ENST00000540280 ZNF831Q5JPB2 1677 aa15.38■□□□□ 0.05
TMEM109-203ENST00000540280 CACNA1SQ13698 1873 aa15.37■□□□□ 0.05
TMEM109-203ENST00000540280 TONSLQ96HA7 1378 aa15.37■□□□□ 0.05
TMEM109-203ENST00000540280 SBNO2Q9Y2G9 1366 aa15.37■□□□□ 0.05
TMEM109-203ENST00000540280 C21orf2O43822 256 aa15.37■□□□□ 0.05
TMEM109-203ENST00000540280 CST9Q5W186 159 aa15.37■□□□□ 0.05
TMEM109-203ENST00000540280 C2CD5Q86YS7 1000 aa15.37■□□□□ 0.05
TMEM109-203ENST00000540280 USP42Q9H9J4 1324 aaKnown RBP15.37■□□□□ 0.05
TMEM109-203ENST00000540280 SMG6Q86US8 1419 aaKnown RBP15.36■□□□□ 0.05
TMEM109-203ENST00000540280 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
TMEM109-203ENST00000540280 MAP3K19Q56UN5 1328 aa15.36■□□□□ 0.05
TMEM109-203ENST00000540280 CNTNAP4Q9C0A0 1308 aa15.36■□□□□ 0.05
TMEM109-203ENST00000540280 ZNF541Q9H0D2 1346 aa15.36■□□□□ 0.05
TMEM109-203ENST00000540280 COL11A2P13942 1736 aaPredicted RBP15.35■□□□□ 0.05
TMEM109-203ENST00000540280 TRAF5O00463 557 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 TM4SF1P30408 202 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 RC3H1Q5TC82 1133 aaKnown RBP15.35■□□□□ 0.05
TMEM109-203ENST00000540280 TAOK3Q9H2K8 898 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 TMOD3Q9NYL9 352 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 HPS5Q9UPZ3 1129 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 TRIOBPQ9H2D6 2365 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 RNF123Q5XPI4 1314 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 EVC2Q86UK5 1308 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 CARMIL3Q8ND23 1372 aa15.35■□□□□ 0.05
TMEM109-203ENST00000540280 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
TMEM109-203ENST00000540280 FBLN1P23142 703 aa15.34■□□□□ 0.05
TMEM109-203ENST00000540280 PNMA8AQ86V59 439 aaPredicted RBP15.34■□□□□ 0.05
TMEM109-203ENST00000540280 ZIC5Q96T25 663 aa15.34■□□□□ 0.05
TMEM109-203ENST00000540280 TIMELESSQ9UNS1 1208 aa15.34■□□□□ 0.05
TMEM109-203ENST00000540280 LTBP3Q9NS15 1303 aa15.34■□□□□ 0.05
TMEM109-203ENST00000540280 ANKRD31Q8N7Z5 1873 aa15.33■□□□□ 0.05
TMEM109-203ENST00000540280 CCER1Q8TC90 406 aaPredicted RBP15.32■□□□□ 0.04
TMEM109-203ENST00000540280 AMPHP49418 695 aa15.31■□□□□ 0.04
TMEM109-203ENST00000540280 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
TMEM109-203ENST00000540280 COLQQ9Y215 455 aaPredicted RBP15.31■□□□□ 0.04
TMEM109-203ENST00000540280 H0YIN7 160 aa15.3■□□□□ 0.04
TMEM109-203ENST00000540280 NKX1-1Q15270 411 aaPredicted RBP15.3■□□□□ 0.04
TMEM109-203ENST00000540280 SAPCD2Q86UD0 394 aa15.3■□□□□ 0.04
TMEM109-203ENST00000540280 SLX4Q8IY92 1834 aa15.3■□□□□ 0.04
TMEM109-203ENST00000540280 CTU1Q7Z7A3 348 aaKnown RBP15.29■□□□□ 0.04
TMEM109-203ENST00000540280 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
TMEM109-203ENST00000540280 NFIXQ14938 502 aa15.27■□□□□ 0.04
TMEM109-203ENST00000540280 USPL1Q5W0Q7 1092 aa15.26■□□□□ 0.03
TMEM109-203ENST00000540280 ROCK2O75116 1388 aaKnown RBP15.25■□□□□ 0.03
TMEM109-203ENST00000540280 INSRP06213 1382 aa15.25■□□□□ 0.03
TMEM109-203ENST00000540280 AKAP11Q9UKA4 1901 aa15.25■□□□□ 0.03
TMEM109-203ENST00000540280 CRKLP46109 303 aaKnown RBP15.25■□□□□ 0.03
TMEM109-203ENST00000540280 TJP1Q07157 1748 aa15.25■□□□□ 0.03
TMEM109-203ENST00000540280 EDC4Q6P2E9 1401 aaKnown RBP15.25■□□□□ 0.03
TMEM109-203ENST00000540280 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
TMEM109-203ENST00000540280 SERPINB2P05120 415 aa15.24■□□□□ 0.03
TMEM109-203ENST00000540280 CEP290O15078 2479 aa15.23■□□□□ 0.03
TMEM109-203ENST00000540280 CELF2O95319 508 aaKnown RBP15.23■□□□□ 0.03
TMEM109-203ENST00000540280 MNX1P50219 401 aaPredicted RBP15.23■□□□□ 0.03
TMEM109-203ENST00000540280 BICDL1Q6ZP65 573 aa15.23■□□□□ 0.03
TMEM109-203ENST00000540280 NOGQ13253 232 aa15.22■□□□□ 0.03
TMEM109-203ENST00000540280 HHIPL1Q96JK4 782 aa15.22■□□□□ 0.03
TMEM109-203ENST00000540280 SAGE1Q9NXZ1 904 aa15.22■□□□□ 0.03
TMEM109-203ENST00000540280 UNC80Q8N2C7 3258 aa15.22■□□□□ 0.03
TMEM109-203ENST00000540280 RTL1A6NKG5 1358 aa15.22■□□□□ 0.03
TMEM109-203ENST00000540280 TRPA1O75762 1119 aa15.21■□□□□ 0.03
TMEM109-203ENST00000540280 BCORQ6W2J9 1755 aa15.21■□□□□ 0.02
TMEM109-203ENST00000540280 RANBP2P49792 3224 aaKnown RBP15.2■□□□□ 0.02
TMEM109-203ENST00000540280 ZPR1O75312 459 aa15.2■□□□□ 0.02
TMEM109-203ENST00000540280 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
TMEM109-203ENST00000540280 ZNF277Q9NRM2 450 aaPredicted RBP15.2■□□□□ 0.02
TMEM109-203ENST00000540280 RNF186Q9NXI6 227 aa15.2■□□□□ 0.02
TMEM109-203ENST00000540280 BRCA2P51587 3418 aa15.2■□□□□ 0.02
TMEM109-203ENST00000540280 AKAP4Q5JQC9 854 aa15.19■□□□□ 0.02
TMEM109-203ENST00000540280 CARD11Q9BXL7 1154 aa15.19■□□□□ 0.02
TMEM109-203ENST00000540280 PRPF40BQ6NWY9 871 aaKnown RBP15.18■□□□□ 0.02
TMEM109-203ENST00000540280 GPC2Q8N158 579 aa15.18■□□□□ 0.02
TMEM109-203ENST00000540280 SYNE4Q8N205 404 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms