RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 MYH14Q7Z406 1995 aaKnown RBP9.21□□□□□ -0.93
LPCAT3-209ENST00000540060 DCTN1Q14203 1278 aa9.21□□□□□ -0.94
LPCAT3-209ENST00000540060 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.94
LPCAT3-209ENST00000540060 SMARCC1Q92922 1105 aaPredicted RBP9.21□□□□□ -0.94
LPCAT3-209ENST00000540060 ATG3Q9NT62 314 aa9.21□□□□□ -0.94
LPCAT3-209ENST00000540060 LRRC4BQ9NT99 713 aa9.21□□□□□ -0.94
LPCAT3-209ENST00000540060 ASAP1Q9ULH1 1129 aa9.21□□□□□ -0.94
LPCAT3-209ENST00000540060 SSUH2Q9Y2M2 353 aa9.21□□□□□ -0.94
LPCAT3-209ENST00000540060 COL24A1Q17RW2 1714 aa9.2□□□□□ -0.94
LPCAT3-209ENST00000540060 RIPK4P57078 832 aa9.2□□□□□ -0.94
LPCAT3-209ENST00000540060 TEFQ10587 303 aa9.2□□□□□ -0.94
LPCAT3-209ENST00000540060 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
LPCAT3-209ENST00000540060 ASTLQ6HA08 431 aaPredicted RBP9.2□□□□□ -0.94
LPCAT3-209ENST00000540060 MIER1Q8N108 512 aa9.2□□□□□ -0.94
LPCAT3-209ENST00000540060 RRP7AQ9Y3A4 280 aaKnown RBP9.2□□□□□ -0.94
LPCAT3-209ENST00000540060 APAF1O14727 1248 aa9.19□□□□□ -0.94
LPCAT3-209ENST00000540060 LMOD3Q0VAK6 560 aa9.19□□□□□ -0.94
LPCAT3-209ENST00000540060 FAM9BQ8IZU0 186 aa9.19□□□□□ -0.94
LPCAT3-209ENST00000540060 THUMPD2Q9BTF0 503 aaKnown RBP9.19□□□□□ -0.94
LPCAT3-209ENST00000540060 ANO8Q9HCE9 1232 aaPredicted RBP9.19□□□□□ -0.94
LPCAT3-209ENST00000540060 CCNL1Q9UK58 526 aaPredicted RBP9.19□□□□□ -0.94
LPCAT3-209ENST00000540060 TRIM35Q9UPQ4 493 aa9.19□□□□□ -0.94
LPCAT3-209ENST00000540060 LOC102724428A0A0B4J2F2 783 aa9.18□□□□□ -0.94
LPCAT3-209ENST00000540060 LRP5O75197 1615 aa9.18□□□□□ -0.94
LPCAT3-209ENST00000540060 KCNQ4P56696 695 aa9.18□□□□□ -0.94
LPCAT3-209ENST00000540060 SIK1P57059 783 aa9.18□□□□□ -0.94
LPCAT3-209ENST00000540060 SLC39A6Q13433 755 aa9.18□□□□□ -0.94
LPCAT3-209ENST00000540060 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
LPCAT3-209ENST00000540060 SLC4A9Q96Q91 983 aa9.18□□□□□ -0.94
LPCAT3-209ENST00000540060 BCORQ6W2J9 1755 aa9.17□□□□□ -0.94
LPCAT3-209ENST00000540060 SCN7AQ01118 1682 aa9.17□□□□□ -0.94
LPCAT3-209ENST00000540060 BTBD11A6QL63 1104 aa9.17□□□□□ -0.94
LPCAT3-209ENST00000540060 ST18O60284 1047 aa9.17□□□□□ -0.94
LPCAT3-209ENST00000540060 ITPK1Q13572 414 aa9.17□□□□□ -0.94
LPCAT3-209ENST00000540060 ZNF827Q17R98 1081 aa9.17□□□□□ -0.94
LPCAT3-209ENST00000540060 ZNF790Q6PG37 636 aa9.17□□□□□ -0.94
LPCAT3-209ENST00000540060 HEG1Q9ULI3 1381 aa9.16□□□□□ -0.94
LPCAT3-209ENST00000540060 PTCD1O75127 700 aaKnown RBP9.16□□□□□ -0.94
LPCAT3-209ENST00000540060 ATP6V1AP38606 617 aa9.16□□□□□ -0.94
LPCAT3-209ENST00000540060 TTC5Q8N0Z6 440 aa9.16□□□□□ -0.94
LPCAT3-209ENST00000540060 LINC00116Q8NCU8 138 aa9.16□□□□□ -0.94
LPCAT3-209ENST00000540060 KCNQ3O43525 872 aa9.15□□□□□ -0.94
LPCAT3-209ENST00000540060 TAF7Q15545 349 aaPredicted RBP9.15□□□□□ -0.94
LPCAT3-209ENST00000540060 SLC15A2Q16348 729 aa9.15□□□□□ -0.94
LPCAT3-209ENST00000540060 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
LPCAT3-209ENST00000540060 NBPF14Q5TI25 921 aa9.15□□□□□ -0.94
LPCAT3-209ENST00000540060 VSIG10Q8N0Z9 540 aa9.15□□□□□ -0.94
LPCAT3-209ENST00000540060 ZNF496Q96IT1 587 aaPredicted RBP9.15□□□□□ -0.94
LPCAT3-209ENST00000540060 CNTNAP4Q9C0A0 1308 aa9.14□□□□□ -0.95
LPCAT3-209ENST00000540060 SENP3-EIF4A1A0A087X0R7 540 aa9.14□□□□□ -0.95
LPCAT3-209ENST00000540060 PSDA5PKW4 1024 aaPredicted RBP9.14□□□□□ -0.95
LPCAT3-209ENST00000540060 R3HDM1Q15032 1099 aaKnown RBP9.14□□□□□ -0.95
LPCAT3-209ENST00000540060 FMNL2Q96PY5 1086 aa9.14□□□□□ -0.95
LPCAT3-209ENST00000540060 STK32BQ9NY57 414 aa9.14□□□□□ -0.95
LPCAT3-209ENST00000540060 MIS18AQ9NYP9 233 aa9.14□□□□□ -0.95
LPCAT3-209ENST00000540060 PNPLA7Q6ZV29 1317 aa9.13□□□□□ -0.95
LPCAT3-209ENST00000540060 HMGB2P26583 209 aaKnown RBP9.13□□□□□ -0.95
LPCAT3-209ENST00000540060 WWC1Q8IX03 1113 aa9.13□□□□□ -0.95
LPCAT3-209ENST00000540060 DNAJC10Q8IXB1 793 aa9.13□□□□□ -0.95
LPCAT3-209ENST00000540060 BABAM1Q9NWV8 329 aa9.13□□□□□ -0.95
LPCAT3-209ENST00000540060 CHL1O00533 1208 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 ATMINO43313 823 aaPredicted RBP9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 ZNF853P0CG23 659 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 CYP19A1P11511 503 aaPredicted RBP9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 CRKLP46109 303 aaKnown RBP9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 CALD1Q05682 793 aaKnown RBP9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 AMIGO3Q86WK7 504 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 NGEFQ8N5V2 710 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 AK7Q96M32 723 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 IFT57Q9NWB7 429 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 TSPYL4Q9UJ04 414 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 ANKRD36CQ5JPF3 1778 aa9.12□□□□□ -0.95
LPCAT3-209ENST00000540060 IL16Q14005 1332 aa9.11□□□□□ -0.95
LPCAT3-209ENST00000540060 ZNF521Q96K83 1311 aa9.11□□□□□ -0.95
LPCAT3-209ENST00000540060 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
LPCAT3-209ENST00000540060 GNPATO15228 680 aa9.11□□□□□ -0.95
LPCAT3-209ENST00000540060 EIF4A1P60842 406 aaKnown RBP9.11□□□□□ -0.95
LPCAT3-209ENST00000540060 RC3H1Q5TC82 1133 aaKnown RBP9.11□□□□□ -0.95
LPCAT3-209ENST00000540060 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
LPCAT3-209ENST00000540060 TFCP2L1Q9NZI6 479 aa9.11□□□□□ -0.95
LPCAT3-209ENST00000540060 SNRPA1P09661 255 aaKnown RBP9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 SSFA2P28290 1259 aa9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 GNAI1P63096 354 aa9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 INTS5Q6P9B9 1019 aaKnown RBP9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 TEX13AQ9BXU3 409 aaPredicted RBP9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 PDGFDQ9GZP0 370 aaPredicted RBP9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 CCDC87Q9NVE4 849 aa9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 ZBTB1Q9Y2K1 713 aa9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 SALL2Q9Y467 1007 aaPredicted RBP9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 LAS1LQ9Y4W2 734 aaKnown RBP9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 COL15A1P39059 1388 aa9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 NUP98P52948 1817 aa9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
LPCAT3-209ENST00000540060 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.95
LPCAT3-209ENST00000540060 SOS1Q07889 1333 aaPredicted RBP9.09□□□□□ -0.95
LPCAT3-209ENST00000540060 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.95
LPCAT3-209ENST00000540060 RPS6KA4O75676 772 aa9.09□□□□□ -0.95
LPCAT3-209ENST00000540060 COL23A1Q86Y22 540 aaPredicted RBP9.09□□□□□ -0.95
LPCAT3-209ENST00000540060 WDR63Q8IWG1 891 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms