RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 H3BM21 787 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 AP1G2O75843 785 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 USP17L8P0C7I0 530 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 LTKP29376 864 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 VEGFBP49765 207 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 UBR1Q8IWV7 1749 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 ERBB4Q15303 1308 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 CCDC18Q5T9S5 1454 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 LRRC9Q6ZRR7 1453 aa6.47□□□□□ -1.37
C2CD3-214ENST00000540057 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
C2CD3-214ENST00000540057 RTEL1-TNFRSF6BF6WH68 1400 aa6.46□□□□□ -1.38
C2CD3-214ENST00000540057 C6orf118Q5T5N4 469 aa6.46□□□□□ -1.38
C2CD3-214ENST00000540057 MEX3CQ5U5Q3 659 aaKnown RBP6.46□□□□□ -1.38
C2CD3-214ENST00000540057 CCDC116Q8IYX3 515 aa6.46□□□□□ -1.38
C2CD3-214ENST00000540057 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.38
C2CD3-214ENST00000540057 ARHGAP9Q9BRR9 750 aa6.46□□□□□ -1.38
C2CD3-214ENST00000540057 CFDP1Q9UEE9 299 aaPredicted RBP6.46□□□□□ -1.38
C2CD3-214ENST00000540057 ARHGAP23Q9P227 1491 aa6.46□□□□□ -1.38
C2CD3-214ENST00000540057 SPATA31A6Q5VVP1 1343 aa6.46□□□□□ -1.38
C2CD3-214ENST00000540057 SETBP1Q9Y6X0 1596 aa6.45□□□□□ -1.38
C2CD3-214ENST00000540057 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
C2CD3-214ENST00000540057 GMPRP36959 345 aa6.45□□□□□ -1.38
C2CD3-214ENST00000540057 RFC5P40937 340 aa6.45□□□□□ -1.38
C2CD3-214ENST00000540057 TXNDC2Q86VQ3 553 aa6.45□□□□□ -1.38
C2CD3-214ENST00000540057 NCOA2Q15596 1464 aa6.45□□□□□ -1.38
C2CD3-214ENST00000540057 MBD5Q9P267 1494 aa6.45□□□□□ -1.38
C2CD3-214ENST00000540057 ZNF644Q9H582 1327 aaPredicted RBP6.45□□□□□ -1.38
C2CD3-214ENST00000540057 SLIT1O75093 1534 aa6.45□□□□□ -1.38
C2CD3-214ENST00000540057 CFAP65Q6ZU64 1925 aaKnown RBP6.44□□□□□ -1.38
C2CD3-214ENST00000540057 FGD6Q6ZV73 1430 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 CASKIN1Q8WXD9 1431 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 KCNA6P17658 529 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 INSM1Q01101 510 aaPredicted RBP6.44□□□□□ -1.38
C2CD3-214ENST00000540057 PPP1R26Q5T8A7 1209 aaPredicted RBP6.44□□□□□ -1.38
C2CD3-214ENST00000540057 PROSER2Q86WR7 435 aaPredicted RBP6.44□□□□□ -1.38
C2CD3-214ENST00000540057 SLC16A10Q8TF71 515 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 SLC10A4Q96EP9 437 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 TRIM34Q9BYJ4 488 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 GOPCQ9HD26 462 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 SLAIN2Q9P270 581 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 EMILIN1Q9Y6C2 1016 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 ERVK-7P63135 1459 aa6.44□□□□□ -1.38
C2CD3-214ENST00000540057 SOS2Q07890 1332 aaPredicted RBP6.44□□□□□ -1.38
C2CD3-214ENST00000540057 RGS12O14924 1447 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 SHPRHQ149N8 1683 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 VSIG8P0DPA2 414 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 BMP2P12643 396 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 UBTFP17480 764 aaKnown RBP6.43□□□□□ -1.38
C2CD3-214ENST00000540057 INTS6LQ5JSJ4 861 aaKnown RBP6.43□□□□□ -1.38
C2CD3-214ENST00000540057 ADAM32Q8TC27 787 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 IRF7Q92985 503 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 KCTD15Q96SI1 283 aaPredicted RBP6.43□□□□□ -1.38
C2CD3-214ENST00000540057 STK17AQ9UEE5 414 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 DNMT3LQ9UJW3 386 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 GPSM3Q9Y4H4 160 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 PRDM15P57071 1507 aaPredicted RBP6.43□□□□□ -1.38
C2CD3-214ENST00000540057 TIAM1Q13009 1591 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 CCNB3Q8WWL7 1395 aa6.43□□□□□ -1.38
C2CD3-214ENST00000540057 ABCC3O15438 1527 aa6.42□□□□□ -1.38
C2CD3-214ENST00000540057 CBLBQ13191 982 aa6.42□□□□□ -1.38
C2CD3-214ENST00000540057 Q6ZVU0 165 aa6.42□□□□□ -1.38
C2CD3-214ENST00000540057 CDV3Q9UKY7 258 aaKnown RBP6.42□□□□□ -1.38
C2CD3-214ENST00000540057 EID1Q9Y6B2 187 aa6.42□□□□□ -1.38
C2CD3-214ENST00000540057 MSH6P52701 1360 aa6.42□□□□□ -1.38
C2CD3-214ENST00000540057 MAN1A2O60476 641 aa6.41□□□□□ -1.38
C2CD3-214ENST00000540057 PTK2Q05397 1052 aa6.41□□□□□ -1.38
C2CD3-214ENST00000540057 ZBTB33Q86T24 672 aa6.41□□□□□ -1.38
C2CD3-214ENST00000540057 TSEN34Q9BSV6 310 aaKnown RBP6.41□□□□□ -1.38
C2CD3-214ENST00000540057 TET3O43151 1660 aa6.41□□□□□ -1.38
C2CD3-214ENST00000540057 AFF2P51816 1311 aa6.41□□□□□ -1.38
C2CD3-214ENST00000540057 NKTRP30414 1462 aaKnown RBP6.41□□□□□ -1.38
C2CD3-214ENST00000540057 NWD1Q149M9 1564 aa6.4□□□□□ -1.38
C2CD3-214ENST00000540057 AHDC1Q5TGY3 1603 aaPredicted RBP6.4□□□□□ -1.38
C2CD3-214ENST00000540057 UPP2O95045 317 aa6.4□□□□□ -1.38
C2CD3-214ENST00000540057 BRPF1P55201 1214 aaPredicted RBP6.4□□□□□ -1.38
C2CD3-214ENST00000540057 RBM6P78332 1123 aaKnown RBP6.4□□□□□ -1.38
C2CD3-214ENST00000540057 NEUROD2Q15784 382 aa6.4□□□□□ -1.38
C2CD3-214ENST00000540057 SLC26A8Q96RN1 970 aa6.4□□□□□ -1.38
C2CD3-214ENST00000540057 TMEM2Q9UHN6 1383 aa6.4□□□□□ -1.39
C2CD3-214ENST00000540057 DIP2AQ14689 1571 aa6.4□□□□□ -1.39
C2CD3-214ENST00000540057 KDM5AP29375 1690 aaKnown RBP6.39□□□□□ -1.39
C2CD3-214ENST00000540057 CEP152O94986 1710 aa6.39□□□□□ -1.39
C2CD3-214ENST00000540057 SPINT1O43278 529 aa6.39□□□□□ -1.39
C2CD3-214ENST00000540057 GJD4Q96KN9 370 aaPredicted RBP6.39□□□□□ -1.39
C2CD3-214ENST00000540057 PCMTD1Q96MG8 357 aaPredicted RBP6.39□□□□□ -1.39
C2CD3-214ENST00000540057 PGPEP1Q9NXJ5 209 aa6.39□□□□□ -1.39
C2CD3-214ENST00000540057 CAMSAP2Q08AD1 1489 aa6.39□□□□□ -1.39
C2CD3-214ENST00000540057 CCDC141Q6ZP82 1450 aa6.39□□□□□ -1.39
C2CD3-214ENST00000540057 FYCO1Q9BQS8 1478 aa6.39□□□□□ -1.39
C2CD3-214ENST00000540057 PIK3C2BO00750 1634 aa6.39□□□□□ -1.39
C2CD3-214ENST00000540057 ESPNB1AK53 854 aa6.38□□□□□ -1.39
C2CD3-214ENST00000540057 PPFIA3O75145 1194 aa6.38□□□□□ -1.39
C2CD3-214ENST00000540057 DHX9Q08211 1270 aaKnown RBP6.38□□□□□ -1.39
C2CD3-214ENST00000540057 IL27Q8NEV9 243 aa6.38□□□□□ -1.39
C2CD3-214ENST00000540057 QTRT2Q9H974 415 aaKnown RBP6.38□□□□□ -1.39
C2CD3-214ENST00000540057 ATAD2Q6PL18 1390 aa6.38□□□□□ -1.39
C2CD3-214ENST00000540057 MROH1Q8NDA8 1641 aa6.38□□□□□ -1.39
C2CD3-214ENST00000540057 TTLL8A6PVC2 850 aa6.37□□□□□ -1.39
C2CD3-214ENST00000540057 GPR37L1O60883 481 aa6.37□□□□□ -1.39
C2CD3-214ENST00000540057 AGBL1Q96MI9 1066 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms