RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 UTRNP46939 3433 aa16.98■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 KCNQ3O43525 872 aa16.97■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 STARD3NLO95772 234 aa16.97■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 TGFB2P61812 414 aa16.97■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 KIF13BQ9NQT8 1826 aa16.97■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 NEFMP07197 916 aa16.96■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 DPEP1P16444 411 aa16.96■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 BCS1LQ9Y276 419 aa16.96■□□□□ 0.31
TSPAN9-IT1-201ENST00000539784 KIAA1551Q9HCM1 1747 aa16.96■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 NARFQ9UHQ1 456 aa16.95■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 GOLGB1Q14789 3259 aaKnown RBP16.94■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 TM4SF1P30408 202 aa16.93■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 NFIXQ14938 502 aa16.93■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 BICDL1Q6ZP65 573 aa16.93■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 A1BGP04217 495 aa16.92■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 EIF5P55010 431 aaKnown RBP16.92■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 BCL2L12Q9HB09 334 aa16.92■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 ATP10DQ9P241 1426 aa16.91■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 A0A087WZG4 1122 aa16.91■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 PRAMEF22A3QJZ6 481 aa16.91■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 PIP4K2AP48426 406 aaPredicted RBP16.91■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 ZNF526Q8TF50 670 aaPredicted RBP16.91■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 HTATSF1O43719 755 aaKnown RBP16.9■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 CHRNA5P30532 468 aa16.9■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 RALBP1Q15311 655 aa16.9■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 USP16Q9Y5T5 823 aa16.9■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
TSPAN9-IT1-201ENST00000539784 SERPINB2P05120 415 aa16.89■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 KCNA3P22001 575 aa16.89■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 PLEKHF1Q96S99 279 aa16.89■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 IL6STP40189 918 aaPredicted RBP16.88■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 AFDNP55196 1824 aaKnown RBP16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 DALRD3Q5D0E6 543 aaKnown RBP16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 TBC1D9BQ66K14 1250 aa16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 THUMPD2Q9BTF0 503 aaKnown RBP16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 PNNQ9H307 717 aaKnown RBP16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 DLG5Q8TDM6 1919 aa16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 SCN7AQ01118 1682 aa16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 ADCY9O60503 1353 aa16.87■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 BRCA1P38398 1863 aaKnown RBP16.86■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 C1QTNF8P60827 252 aa16.86■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 GPBP1L1Q9HC44 474 aaPredicted RBP16.86■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 DZIP3Q86Y13 1208 aaKnown RBP16.85■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 MYBBP1AQ9BQG0 1328 aaKnown RBP16.85■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 NRXN2Q9P2S2 1712 aa16.84■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 CCDC24Q8N4L8 307 aa16.84■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 CARMIL3Q8ND23 1372 aa16.84■□□□□ 0.29
TSPAN9-IT1-201ENST00000539784 NPHP1O15259 732 aa16.83■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 CAMTA2O94983 1202 aa16.83■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 C2CD5Q86YS7 1000 aa16.82■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 PNISRQ8TF01 805 aaKnown RBP16.82■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 ARFGEF1Q9Y6D6 1849 aa16.82■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 NBPF26B4DH59 902 aa16.81■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 RIPK4P57078 832 aa16.81■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 NBPF10Q6P3W6 841 aaKnown RBP16.81■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 NBPF15Q8N660 670 aa16.81■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 SETDB2Q96T68 719 aa16.81■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 BCORQ6W2J9 1755 aa16.81■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 KDM3BQ7LBC6 1761 aa16.8■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 H0YIN7 160 aa16.8■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 C9orf131Q5VYM1 1079 aa16.8■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 PRR5LQ6MZQ0 368 aa16.8■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 WDR43Q15061 677 aaKnown RBP eCLIP16.79■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 NEUROD2Q15784 382 aa16.79■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 CNBD1Q8NA66 436 aa16.79■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 LAMB4A4D0S4 1761 aa16.79■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 TMPOP42166 694 aaKnown RBP16.78■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 TTLL6Q8N841 843 aa16.78■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 ZNF622Q969S3 477 aaKnown RBP eCLIP16.78■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 ZNF652Q9Y2D9 606 aa16.78■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 PDE6BP35913 854 aa16.77■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 ST5P78524 1137 aa16.77■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 RASSF7Q02833 373 aa16.77■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 RNF181Q9P0P0 153 aa16.77■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.28
TSPAN9-IT1-201ENST00000539784 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms