RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CNTROBQ8N137 903 aa16■□□□□ 0.15
UBE3B-209ENST00000539584 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
UBE3B-209ENST00000539584 SGSM2O43147 1006 aa15.99■□□□□ 0.15
UBE3B-209ENST00000539584 USP42Q9H9J4 1324 aaKnown RBP15.99■□□□□ 0.15
UBE3B-209ENST00000539584 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
UBE3B-209ENST00000539584 DYNC1I1O14576 645 aa15.99■□□□□ 0.15
UBE3B-209ENST00000539584 CCDC183Q5T5S1 534 aa15.99■□□□□ 0.15
UBE3B-209ENST00000539584 HDAC5Q9UQL6 1122 aa15.99■□□□□ 0.15
UBE3B-209ENST00000539584 TBX22Q9Y458 520 aa15.99■□□□□ 0.15
UBE3B-209ENST00000539584 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
UBE3B-209ENST00000539584 RIMS1Q86UR5 1692 aaKnown RBP15.98■□□□□ 0.15
UBE3B-209ENST00000539584 TTC41PQ6P2S7 1318 aa15.98■□□□□ 0.15
UBE3B-209ENST00000539584 NGDNQ8NEJ9 315 aaKnown RBP15.98■□□□□ 0.15
UBE3B-209ENST00000539584 USP54Q70EL1 1684 aa15.98■□□□□ 0.15
UBE3B-209ENST00000539584 TSHZ3Q63HK5 1081 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 RHPN1Q8TCX5 695 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 RUFY2Q8WXA3 655 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 R3HCC1Q9Y3T6 440 aaKnown RBP15.97■□□□□ 0.15
UBE3B-209ENST00000539584 UBE2HP62256 183 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 KIAA2012Q0VF49 1180 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 SASS6Q6UVJ0 657 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 USP48Q86UV5 1035 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 PI4K2BQ8TCG2 481 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 TTC14Q96N46 770 aa15.97■□□□□ 0.15
UBE3B-209ENST00000539584 RPAP1Q9BWH6 1393 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-209ENST00000539584 TSPOAP1O95153 1857 aa15.96■□□□□ 0.15
UBE3B-209ENST00000539584 ZSCAN22P10073 491 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-209ENST00000539584 HDGFL1Q5TGJ6 251 aa15.96■□□□□ 0.15
UBE3B-209ENST00000539584 IL17REQ8NFR9 667 aa15.96■□□□□ 0.15
UBE3B-209ENST00000539584 SURF6O75683 361 aaKnown RBP15.95■□□□□ 0.14
UBE3B-209ENST00000539584 HOXC9P31274 260 aa15.95■□□□□ 0.14
UBE3B-209ENST00000539584 PPP1R42Q7Z4L9 355 aa15.95■□□□□ 0.14
UBE3B-209ENST00000539584 UNC5CLQ8IV45 518 aa15.95■□□□□ 0.14
UBE3B-209ENST00000539584 ZSCAN31Q96LW9 406 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-209ENST00000539584 UPF3BQ9BZI7 483 aaKnown RBP15.95■□□□□ 0.14
UBE3B-209ENST00000539584 DIP2AQ14689 1571 aa15.95■□□□□ 0.14
UBE3B-209ENST00000539584 GLRX3O76003 335 aaKnown RBP15.95■□□□□ 0.14
UBE3B-209ENST00000539584 PTMAP06454 111 aaKnown RBP15.95■□□□□ 0.14
UBE3B-209ENST00000539584 XPCQ01831 940 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-209ENST00000539584 FOXD4L5Q5VV16 416 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-209ENST00000539584 FOXD4L4Q8WXT5 416 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-209ENST00000539584 TM6SF1Q9BZW5 370 aa15.95■□□□□ 0.14
UBE3B-209ENST00000539584 SNX14Q9Y5W7 946 aa15.95■□□□□ 0.14
UBE3B-209ENST00000539584 CEMIPQ8WUJ3 1361 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 LTKP29376 864 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 LSG1Q9H089 658 aaKnown RBP15.94■□□□□ 0.14
UBE3B-209ENST00000539584 SH2B1Q9NRF2 756 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-209ENST00000539584 AMOTL2Q9Y2J4 779 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 PIK3C2AO00443 1686 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 SLIT1O75093 1534 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 NWD1Q149M9 1564 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 SOX12O15370 315 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 STX6O43752 255 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 MTX1Q13505 466 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 RNF214Q8ND24 703 aa15.94■□□□□ 0.14
UBE3B-209ENST00000539584 NLRP6P59044 892 aa15.93■□□□□ 0.14
UBE3B-209ENST00000539584 CRYBG1Q9Y4K1 1723 aa15.93■□□□□ 0.14
UBE3B-209ENST00000539584 ARHGAP23Q9P227 1491 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 UQCRHLA0A096LP55 91 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 NUTM2FA1L443 756 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 SRGAP3O43295 1099 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 TPM3P06753 285 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 UQCRHP07919 91 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 VPS53Q5VIR6 699 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 KCNB2Q92953 911 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 PRIMPOLQ96LW4 560 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 IL1RAPL2Q9NP60 686 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 SMC3Q9UQE7 1217 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 HMGN5P82970 282 aaKnown RBP15.92■□□□□ 0.14
UBE3B-209ENST00000539584 ERC1Q8IUD2 1116 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 GPATCH3Q96I76 525 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 CHAMP1Q96JM3 812 aa15.92■□□□□ 0.14
UBE3B-209ENST00000539584 GADD45BO75293 160 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-209ENST00000539584 F13A1P00488 732 aa15.91■□□□□ 0.14
UBE3B-209ENST00000539584 AK2P54819 239 aa15.91■□□□□ 0.14
UBE3B-209ENST00000539584 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
UBE3B-209ENST00000539584 DNAAF4Q8WXU2 420 aa15.91■□□□□ 0.14
UBE3B-209ENST00000539584 HIP1O00291 1037 aa15.9■□□□□ 0.14
UBE3B-209ENST00000539584 SYT1P21579 422 aa15.9■□□□□ 0.14
UBE3B-209ENST00000539584 BEND3Q5T5X7 828 aa15.9■□□□□ 0.14
UBE3B-209ENST00000539584 NOL8Q76FK4 1167 aaKnown RBP15.9■□□□□ 0.14
UBE3B-209ENST00000539584 PIBF1Q8WXW3 757 aa15.9■□□□□ 0.14
UBE3B-209ENST00000539584 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
UBE3B-209ENST00000539584 MED1Q15648 1581 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-209ENST00000539584 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
UBE3B-209ENST00000539584 CLASRPQ8N2M8 674 aaKnown RBP15.9■□□□□ 0.14
UBE3B-209ENST00000539584 EIF4A1P60842 406 aaKnown RBP15.89■□□□□ 0.13
UBE3B-209ENST00000539584 IL25Q9H293 177 aa15.89■□□□□ 0.13
UBE3B-209ENST00000539584 DIAPH3Q9NSV4 1193 aa15.89■□□□□ 0.13
UBE3B-209ENST00000539584 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.89■□□□□ 0.13
UBE3B-209ENST00000539584 ALDH1L1O75891 902 aa15.89■□□□□ 0.13
UBE3B-209ENST00000539584 RUFY3Q7L099 469 aa15.89■□□□□ 0.13
UBE3B-209ENST00000539584 ZSWIM6Q9HCJ5 1215 aa15.89■□□□□ 0.13
UBE3B-209ENST00000539584 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
UBE3B-209ENST00000539584 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
UBE3B-209ENST00000539584 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
UBE3B-209ENST00000539584 KDM4AO75164 1064 aa15.87■□□□□ 0.13
UBE3B-209ENST00000539584 ZKSCAN1P17029 563 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-209ENST00000539584 EVI5LQ96CN4 794 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms