RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-204ENST00000539463 NFE2L2Q16236 605 aa34.22■■■■□ 3.07
DENR-204ENST00000539463 PRKRIP1Q9H875 184 aaPredicted RBP34.22■■■■□ 3.07
DENR-204ENST00000539463 PELP1Q8IZL8 1130 aaKnown RBP34.21■■■■□ 3.07
DENR-204ENST00000539463 FKBP8Q14318 412 aa34.2■■■■□ 3.07
DENR-204ENST00000539463 MAPK8IP3Q9UPT6 1336 aa34.2■■■■□ 3.07
DENR-204ENST00000539463 CANXP27824 592 aaKnown RBP34.19■■■■□ 3.06
DENR-204ENST00000539463 TAF7Q15545 349 aaPredicted RBP34.19■■■■□ 3.06
DENR-204ENST00000539463 ZPR1O75312 459 aa34.17■■■■□ 3.06
DENR-204ENST00000539463 COL15A1P39059 1388 aa34.17■■■■□ 3.06
DENR-204ENST00000539463 USPL1Q5W0Q7 1092 aa34.16■■■■□ 3.06
DENR-204ENST00000539463 PARP3Q9Y6F1 533 aa34.16■■■■□ 3.06
DENR-204ENST00000539463 YBX3P16989 372 aaKnown RBP eCLIP34.15■■■■□ 3.06
DENR-204ENST00000539463 EIF5P55010 431 aaKnown RBP34.15■■■■□ 3.06
DENR-204ENST00000539463 NARFQ9UHQ1 456 aa34.15■■■■□ 3.06
DENR-204ENST00000539463 DLG5Q8TDM6 1919 aa34.13■■■■□ 3.05
DENR-204ENST00000539463 MIS18AQ9NYP9 233 aa34.13■■■■□ 3.05
DENR-204ENST00000539463 THUMPD2Q9BTF0 503 aaKnown RBP34.12■■■■□ 3.05
DENR-204ENST00000539463 A1BGP04217 495 aa34.11■■■■□ 3.05
DENR-204ENST00000539463 TM4SF1P30408 202 aa34.11■■■■□ 3.05
DENR-204ENST00000539463 DDR1Q08345 913 aa34.11■■■■□ 3.05
DENR-204ENST00000539463 USP16Q9Y5T5 823 aa34.11■■■■□ 3.05
DENR-204ENST00000539463 PRAMEF22A3QJZ6 481 aa34.1■■■■□ 3.05
DENR-204ENST00000539463 SNRPA1P09661 255 aaKnown RBP34.1■■■■□ 3.05
DENR-204ENST00000539463 BCL2L12Q9HB09 334 aa34.09■■■■□ 3.05
DENR-204ENST00000539463 C10orf71Q711Q0 1435 aa34.09■■■■□ 3.05
DENR-204ENST00000539463 A0A087WZG4 1122 aa34.08■■■■□ 3.05
DENR-204ENST00000539463 GRIN3BO60391 1043 aa34.08■■■■□ 3.05
DENR-204ENST00000539463 IL6STP40189 918 aaPredicted RBP34.08■■■■□ 3.05
DENR-204ENST00000539463 WDR43Q15061 677 aaKnown RBP eCLIP34.08■■■■□ 3.05
DENR-204ENST00000539463 PNISRQ8TF01 805 aaKnown RBP34.08■■■■□ 3.05
DENR-204ENST00000539463 RIPK4P57078 832 aa34.07■■■■□ 3.04
DENR-204ENST00000539463 ZNF316A6NFI3 1004 aaPredicted RBP34.06■■■■□ 3.04
DENR-204ENST00000539463 TMPOP42166 694 aaKnown RBP34.06■■■■□ 3.04
DENR-204ENST00000539463 TGFB2P61812 414 aa34.06■■■■□ 3.04
DENR-204ENST00000539463 CCDC146Q8IYE0 955 aa34.06■■■■□ 3.04
DENR-204ENST00000539463 ADAMTS8Q9UP79 889 aa34.06■■■■□ 3.04
DENR-204ENST00000539463 POLRMTO00411 1230 aaKnown RBP34.05■■■■□ 3.04
DENR-204ENST00000539463 KIF13BQ9NQT8 1826 aa34.04■■■■□ 3.04
DENR-204ENST00000539463 NFIXQ14938 502 aa34.04■■■■□ 3.04
DENR-204ENST00000539463 ZNF330Q9Y3S2 320 aaPredicted RBP34.04■■■■□ 3.04
DENR-204ENST00000539463 PXDNLA1KZ92 1463 aa34.03■■■■□ 3.04
DENR-204ENST00000539463 WWC3Q9ULE0 1092 aa34.03■■■■□ 3.04
DENR-204ENST00000539463 RUNDC1Q96C34 613 aa34.02■■■■□ 3.04
DENR-204ENST00000539463 TBC1D2BQ9UPU7 963 aa34.02■■■■□ 3.04
DENR-204ENST00000539463 A0A0G2JLW4 131 aa34.01■■■■□ 3.03
DENR-204ENST00000539463 PIP4K2AP48426 406 aaPredicted RBP34■■■■□ 3.03
DENR-204ENST00000539463 RRP7AQ9Y3A4 280 aaKnown RBP34■■■■□ 3.03
DENR-204ENST00000539463 EIF4A1P60842 406 aaKnown RBP33.99■■■■□ 3.03
DENR-204ENST00000539463 KIAA1551Q9HCM1 1747 aa33.99■■■■□ 3.03
DENR-204ENST00000539463 CHD4Q14839 1912 aa33.98■■■■□ 3.03
DENR-204ENST00000539463 DPEP1P16444 411 aa33.98■■■■□ 3.03
DENR-204ENST00000539463 LMOD3Q0VAK6 560 aa33.98■■■■□ 3.03
DENR-204ENST00000539463 NPM2Q86SE8 214 aaKnown RBP33.98■■■■□ 3.03
DENR-204ENST00000539463 KDM3BQ7LBC6 1761 aa33.98■■■■□ 3.03
DENR-204ENST00000539463 NEUROD2Q15784 382 aa33.97■■■■□ 3.03
DENR-204ENST00000539463 GIGYF1O75420 1035 aaPredicted RBP33.96■■■■□ 3.03
DENR-204ENST00000539463 NBPF26B4DH59 902 aa33.95■■■■□ 3.03
DENR-204ENST00000539463 NBPF10Q6P3W6 841 aaKnown RBP33.95■■■■□ 3.03
DENR-204ENST00000539463 NBPF15Q8N660 670 aa33.95■■■■□ 3.03
DENR-204ENST00000539463 N4BP2Q86UW6 1770 aaPredicted RBP33.94■■■■□ 3.02
DENR-204ENST00000539463 CAMTA2O94983 1202 aa33.94■■■■□ 3.02
DENR-204ENST00000539463 SERPINB2P05120 415 aa33.94■■■■□ 3.02
DENR-204ENST00000539463 KCNA3P22001 575 aa33.94■■■■□ 3.02
DENR-204ENST00000539463 TBC1D9BQ66K14 1250 aa33.94■■■■□ 3.02
DENR-204ENST00000539463 BICDL1Q6ZP65 573 aa33.94■■■■□ 3.02
DENR-204ENST00000539463 DZIP3Q86Y13 1208 aaKnown RBP33.94■■■■□ 3.02
DENR-204ENST00000539463 TSPYL4Q9UJ04 414 aa33.93■■■■□ 3.02
DENR-204ENST00000539463 TRIM35Q9UPQ4 493 aa33.92■■■■□ 3.02
DENR-204ENST00000539463 ZNF784Q8NCA9 323 aaPredicted RBP33.91■■■■□ 3.02
DENR-204ENST00000539463 BABAM1Q9NWV8 329 aa33.91■■■■□ 3.02
DENR-204ENST00000539463 SCN7AQ01118 1682 aa33.9■■■■□ 3.02
DENR-204ENST00000539463 BCS1LQ9Y276 419 aa33.89■■■■□ 3.02
DENR-204ENST00000539463 CCDC184Q52MB2 194 aa33.88■■■■□ 3.01
DENR-204ENST00000539463 NRXN2Q9P2S2 1712 aa33.87■■■■□ 3.01
DENR-204ENST00000539463 CHRNA5P30532 468 aa33.87■■■■□ 3.01
DENR-204ENST00000539463 AFDNP55196 1824 aaKnown RBP33.87■■■■□ 3.01
DENR-204ENST00000539463 PIM2Q9P1W9 311 aa33.86■■■■□ 3.01
DENR-204ENST00000539463 LAMB4A4D0S4 1761 aa33.85■■■■□ 3.01
DENR-204ENST00000539463 SETDB2Q96T68 719 aa33.84■■■■□ 3.01
DENR-204ENST00000539463 CLEC4GQ6UXB4 293 aa33.83■■■■□ 3.01
DENR-204ENST00000539463 CARMIL3Q8ND23 1372 aa33.83■■■■□ 3.01
DENR-204ENST00000539463 CHL1O00533 1208 aa33.82■■■■□ 3
DENR-204ENST00000539463 APAF1O14727 1248 aa33.82■■■■□ 3
DENR-204ENST00000539463 BCORQ6W2J9 1755 aa33.81■■■■□ 3
DENR-204ENST00000539463 DALRD3Q5D0E6 543 aaKnown RBP33.81■■■■□ 3
DENR-204ENST00000539463 BRCA1P38398 1863 aaKnown RBP33.8■■■■□ 3
DENR-204ENST00000539463 RGL2O15211 777 aa33.8■■■■□ 3
DENR-204ENST00000539463 ZNF652Q9Y2D9 606 aa33.8■■■■□ 3
DENR-204ENST00000539463 ANP32CO43423 234 aa33.79■■■■□ 3
DENR-204ENST00000539463 PRR5LQ6MZQ0 368 aa33.79■■■■□ 3
DENR-204ENST00000539463 NGEFQ8N5V2 710 aa33.79■■■■□ 3
DENR-204ENST00000539463 LAS1LQ9Y4W2 734 aaKnown RBP33.78■■■■□ 3
DENR-204ENST00000539463 MYL6BP14649 208 aa33.76■■■□□ 2.99
DENR-204ENST00000539463 HLFQ16534 295 aa33.76■■■□□ 2.99
DENR-204ENST00000539463 ARHGAP27Q6ZUM4 889 aa33.76■■■□□ 2.99
DENR-204ENST00000539463 CCDC24Q8N4L8 307 aa33.76■■■□□ 2.99
DENR-204ENST00000539463 ERBB4Q15303 1308 aa33.76■■■□□ 2.99
DENR-204ENST00000539463 EIF2S2P20042 333 aaKnown RBP33.75■■■□□ 2.99
DENR-204ENST00000539463 C2CD5Q86YS7 1000 aa33.75■■■□□ 2.99
DENR-204ENST00000539463 BRIP1Q9BX63 1249 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms