RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 SLC52A2Q9HAB3 445 aa25.3■■□□□ 1.64
LINC00943-205ENST00000539315 CHRNA5P30532 468 aa25.29■■□□□ 1.64
LINC00943-205ENST00000539315 APLP1P51693 650 aa25.29■■□□□ 1.64
LINC00943-205ENST00000539315 DALRD3Q5D0E6 543 aaKnown RBP25.29■■□□□ 1.64
LINC00943-205ENST00000539315 SLC39A6Q13433 755 aa25.28■■□□□ 1.64
LINC00943-205ENST00000539315 USPL1Q5W0Q7 1092 aa25.28■■□□□ 1.64
LINC00943-205ENST00000539315 DNAJC5GQ8N7S2 189 aa25.28■■□□□ 1.64
LINC00943-205ENST00000539315 RNMTO43148 476 aaKnown RBP25.27■■□□□ 1.64
LINC00943-205ENST00000539315 CYP19A1P11511 503 aaPredicted RBP25.27■■□□□ 1.64
LINC00943-205ENST00000539315 CFAP53Q96M91 514 aa25.27■■□□□ 1.64
LINC00943-205ENST00000539315 SOS1Q07889 1333 aaPredicted RBP25.27■■□□□ 1.64
LINC00943-205ENST00000539315 SBF1O95248 1867 aa25.26■■□□□ 1.63
LINC00943-205ENST00000539315 VIRMAQ69YN4 1812 aaKnown RBP25.26■■□□□ 1.63
LINC00943-205ENST00000539315 HMOX1P09601 288 aa25.25■■□□□ 1.63
LINC00943-205ENST00000539315 MRS2Q9HD23 443 aa25.25■■□□□ 1.63
LINC00943-205ENST00000539315 MRC1P22897 1456 aa25.25■■□□□ 1.63
LINC00943-205ENST00000539315 ZPR1O75312 459 aa25.24■■□□□ 1.63
LINC00943-205ENST00000539315 MTHFSDQ2M296 383 aaKnown RBP25.23■■□□□ 1.63
LINC00943-205ENST00000539315 AFDNP55196 1824 aaKnown RBP25.23■■□□□ 1.63
LINC00943-205ENST00000539315 KCPQ6ZWJ8 1503 aa25.22■■□□□ 1.63
LINC00943-205ENST00000539315 NFIXQ14938 502 aa25.22■■□□□ 1.63
LINC00943-205ENST00000539315 RBM46Q8TBY0 533 aaKnown RBP25.22■■□□□ 1.63
LINC00943-205ENST00000539315 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
LINC00943-205ENST00000539315 RNF181Q9P0P0 153 aa25.22■■□□□ 1.63
LINC00943-205ENST00000539315 NARFQ9UHQ1 456 aa25.22■■□□□ 1.63
LINC00943-205ENST00000539315 ZBTB1Q9Y2K1 713 aa25.22■■□□□ 1.63
LINC00943-205ENST00000539315 COL15A1P39059 1388 aa25.18■■□□□ 1.62
LINC00943-205ENST00000539315 NRXN2Q9P2S2 1712 aa25.18■■□□□ 1.62
LINC00943-205ENST00000539315 CCDC184Q52MB2 194 aa25.17■■□□□ 1.62
LINC00943-205ENST00000539315 VSIG10Q8N0Z9 540 aa25.17■■□□□ 1.62
LINC00943-205ENST00000539315 RRAGCQ9HB90 399 aa25.17■■□□□ 1.62
LINC00943-205ENST00000539315 PRELPP51888 382 aa25.16■■□□□ 1.62
LINC00943-205ENST00000539315 HTRA3P83110 453 aa25.16■■□□□ 1.62
LINC00943-205ENST00000539315 KDM2BQ8NHM5 1336 aa25.15■■□□□ 1.62
LINC00943-205ENST00000539315 DIAPH1O60610 1272 aaKnown RBP25.15■■□□□ 1.62
LINC00943-205ENST00000539315 SERPINB2P05120 415 aa25.15■■□□□ 1.62
LINC00943-205ENST00000539315 RASSF7Q02833 373 aa25.15■■□□□ 1.62
LINC00943-205ENST00000539315 C16orf71Q8IYS4 520 aaPredicted RBP25.15■■□□□ 1.62
LINC00943-205ENST00000539315 NUDCQ9Y266 331 aa25.15■■□□□ 1.62
LINC00943-205ENST00000539315 UBR2Q8IWV8 1755 aa25.14■■□□□ 1.62
LINC00943-205ENST00000539315 WDR90Q96KV7 1748 aa25.14■■□□□ 1.61
LINC00943-205ENST00000539315 PCNTO95613 3336 aa25.13■■□□□ 1.61
LINC00943-205ENST00000539315 CANXP27824 592 aaKnown RBP25.13■■□□□ 1.61
LINC00943-205ENST00000539315 FSTL1Q12841 308 aa25.13■■□□□ 1.61
LINC00943-205ENST00000539315 EIF5P55010 431 aaKnown RBP25.12■■□□□ 1.61
LINC00943-205ENST00000539315 DLEC1Q9Y238 1755 aa25.11■■□□□ 1.61
LINC00943-205ENST00000539315 CARMIL3Q8ND23 1372 aa25.11■■□□□ 1.61
LINC00943-205ENST00000539315 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.61
LINC00943-205ENST00000539315 IL17REQ8NFR9 667 aa25.11■■□□□ 1.61
LINC00943-205ENST00000539315 PNISRQ8TF01 805 aaKnown RBP25.11■■□□□ 1.61
LINC00943-205ENST00000539315 TTLL6Q8N841 843 aa25.1■■□□□ 1.61
LINC00943-205ENST00000539315 CCDC88AQ3V6T2 1871 aa25.1■■□□□ 1.61
LINC00943-205ENST00000539315 C2CD5Q86YS7 1000 aa25.09■■□□□ 1.61
LINC00943-205ENST00000539315 ZNF496Q96IT1 587 aaPredicted RBP25.09■■□□□ 1.61
LINC00943-205ENST00000539315 TNRC6CQ9HCJ0 1690 aaKnown RBP25.08■■□□□ 1.61
LINC00943-205ENST00000539315 STARD3NLO95772 234 aa25.08■■□□□ 1.61
LINC00943-205ENST00000539315 LMNB1P20700 586 aa25.08■■□□□ 1.61
LINC00943-205ENST00000539315 BICDL1Q6ZP65 573 aa25.08■■□□□ 1.61
LINC00943-205ENST00000539315 FAM9BQ8IZU0 186 aa25.08■■□□□ 1.61
LINC00943-205ENST00000539315 KLRG1Q96E93 195 aa25.08■■□□□ 1.61
LINC00943-205ENST00000539315 COL3A1P02461 1466 aaPredicted RBP25.08■■□□□ 1.6
LINC00943-205ENST00000539315 ZC3H4Q9UPT8 1303 aaKnown RBP25.07■■□□□ 1.6
LINC00943-205ENST00000539315 NFKBIEO00221 500 aa25.06■■□□□ 1.6
LINC00943-205ENST00000539315 TBC1D9BQ66K14 1250 aa25.06■■□□□ 1.6
LINC00943-205ENST00000539315 TTC5Q8N0Z6 440 aa25.06■■□□□ 1.6
LINC00943-205ENST00000539315 ANKRD31Q8N7Z5 1873 aa25.05■■□□□ 1.6
LINC00943-205ENST00000539315 GLTPD2A6NH11 291 aa25.05■■□□□ 1.6
LINC00943-205ENST00000539315 H0YIN7 160 aa25.05■■□□□ 1.6
LINC00943-205ENST00000539315 U2SURPO15042 1029 aaKnown RBP25.05■■□□□ 1.6
LINC00943-205ENST00000539315 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
LINC00943-205ENST00000539315 JMYQ8N9B5 988 aa25.05■■□□□ 1.6
LINC00943-205ENST00000539315 A0A087WZG4 1122 aa25.04■■□□□ 1.6
LINC00943-205ENST00000539315 GNAT3A8MTJ3 354 aa25.04■■□□□ 1.6
LINC00943-205ENST00000539315 HEG1Q9ULI3 1381 aa25.04■■□□□ 1.6
LINC00943-205ENST00000539315 SIPA1L3O60292 1781 aaPredicted RBP25.03■■□□□ 1.6
LINC00943-205ENST00000539315 SMC1BQ8NDV3 1235 aa25.03■■□□□ 1.6
LINC00943-205ENST00000539315 TBC1D2BQ9UPU7 963 aa25.03■■□□□ 1.6
LINC00943-205ENST00000539315 U2AF1L5P0DN76 240 aaPredicted RBP25.02■■□□□ 1.6
LINC00943-205ENST00000539315 U2AF1Q01081 240 aaKnown RBP eCLIP25.02■■□□□ 1.6
LINC00943-205ENST00000539315 TEFQ10587 303 aa25.02■■□□□ 1.6
LINC00943-205ENST00000539315 GAS2L2Q8NHY3 880 aa25.02■■□□□ 1.6
LINC00943-205ENST00000539315 PRR5LQ6MZQ0 368 aa25.01■■□□□ 1.59
LINC00943-205ENST00000539315 CCDC24Q8N4L8 307 aa25.01■■□□□ 1.59
LINC00943-205ENST00000539315 TEX13AQ9BXU3 409 aaPredicted RBP25.01■■□□□ 1.59
LINC00943-205ENST00000539315 ADAMTS8Q9UP79 889 aa25.01■■□□□ 1.59
LINC00943-205ENST00000539315 POTECB2RU33 542 aa25■■□□□ 1.59
LINC00943-205ENST00000539315 KCNQ3O43525 872 aa25■■□□□ 1.59
LINC00943-205ENST00000539315 A1BGP04217 495 aa25■■□□□ 1.59
LINC00943-205ENST00000539315 VEGFAP15692 232 aaPredicted RBP25■■□□□ 1.59
LINC00943-205ENST00000539315 BRIP1Q9BX63 1249 aa25■■□□□ 1.59
LINC00943-205ENST00000539315 PNNQ9H307 717 aaKnown RBP25■■□□□ 1.59
LINC00943-205ENST00000539315 IL6STP40189 918 aaPredicted RBP24.99■■□□□ 1.59
LINC00943-205ENST00000539315 ZNF622Q969S3 477 aaKnown RBP eCLIP24.99■■□□□ 1.59
LINC00943-205ENST00000539315 PHACTR3Q96KR7 559 aa24.99■■□□□ 1.59
LINC00943-205ENST00000539315 CEMIPQ8WUJ3 1361 aa24.98■■□□□ 1.59
LINC00943-205ENST00000539315 ZNF330Q9Y3S2 320 aaPredicted RBP24.98■■□□□ 1.59
LINC00943-205ENST00000539315 TIAM2Q8IVF5 1701 aa24.98■■□□□ 1.59
LINC00943-205ENST00000539315 SCN7AQ01118 1682 aa24.97■■□□□ 1.59
LINC00943-205ENST00000539315 C21orf2O43822 256 aa24.97■■□□□ 1.59
LINC00943-205ENST00000539315 CAMTA2O94983 1202 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms