RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 HSP90AB1P08238 724 aaKnown RBP11.27□□□□□ -0.61
NPIPB4-210ENST00000539191 ADRA2BP18089 450 aa11.27□□□□□ -0.61
NPIPB4-210ENST00000539191 NFIXQ14938 502 aa11.27□□□□□ -0.61
NPIPB4-210ENST00000539191 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
NPIPB4-210ENST00000539191 CC2D1BQ5T0F9 858 aaKnown RBP11.27□□□□□ -0.61
NPIPB4-210ENST00000539191 BCL2L12Q9HB09 334 aa11.27□□□□□ -0.61
NPIPB4-210ENST00000539191 PIM2Q9P1W9 311 aa11.27□□□□□ -0.61
NPIPB4-210ENST00000539191 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
NPIPB4-210ENST00000539191 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
NPIPB4-210ENST00000539191 CAPN15O75808 1086 aa11.26□□□□□ -0.61
NPIPB4-210ENST00000539191 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
NPIPB4-210ENST00000539191 MTHFSDQ2M296 383 aaKnown RBP11.26□□□□□ -0.61
NPIPB4-210ENST00000539191 AMOTQ4VCS5 1084 aa11.26□□□□□ -0.61
NPIPB4-210ENST00000539191 ZNF330Q9Y3S2 320 aaPredicted RBP11.26□□□□□ -0.61
NPIPB4-210ENST00000539191 SOS1Q07889 1333 aaPredicted RBP11.26□□□□□ -0.61
NPIPB4-210ENST00000539191 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
NPIPB4-210ENST00000539191 RNMTO43148 476 aaKnown RBP11.25□□□□□ -0.61
NPIPB4-210ENST00000539191 CYP19A1P11511 503 aaPredicted RBP11.25□□□□□ -0.61
NPIPB4-210ENST00000539191 TM4SF1P30408 202 aa11.25□□□□□ -0.61
NPIPB4-210ENST00000539191 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
NPIPB4-210ENST00000539191 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
NPIPB4-210ENST00000539191 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
NPIPB4-210ENST00000539191 COL15A1P39059 1388 aa11.25□□□□□ -0.61
NPIPB4-210ENST00000539191 MRC1P22897 1456 aa11.25□□□□□ -0.61
NPIPB4-210ENST00000539191 ZPR1O75312 459 aa11.24□□□□□ -0.61
NPIPB4-210ENST00000539191 APLP1P51693 650 aa11.24□□□□□ -0.61
NPIPB4-210ENST00000539191 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
NPIPB4-210ENST00000539191 KIF7Q2M1P5 1343 aa11.24□□□□□ -0.61
NPIPB4-210ENST00000539191 SCN7AQ01118 1682 aa11.24□□□□□ -0.61
NPIPB4-210ENST00000539191 HMGB2P26583 209 aaKnown RBP11.23□□□□□ -0.61
NPIPB4-210ENST00000539191 AKAP4Q5JQC9 854 aa11.23□□□□□ -0.61
NPIPB4-210ENST00000539191 COL13A1Q5TAT6 717 aaPredicted RBP11.23□□□□□ -0.61
NPIPB4-210ENST00000539191 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
NPIPB4-210ENST00000539191 SLX4Q8IY92 1834 aa11.23□□□□□ -0.61
NPIPB4-210ENST00000539191 KCNQ3O43525 872 aa11.22□□□□□ -0.61
NPIPB4-210ENST00000539191 C2CD5Q86YS7 1000 aa11.22□□□□□ -0.61
NPIPB4-210ENST00000539191 C16orf71Q8IYS4 520 aaPredicted RBP11.22□□□□□ -0.61
NPIPB4-210ENST00000539191 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.61
NPIPB4-210ENST00000539191 COL3A1P02461 1466 aaPredicted RBP11.21□□□□□ -0.61
NPIPB4-210ENST00000539191 SERPINB2P05120 415 aa11.21□□□□□ -0.61
NPIPB4-210ENST00000539191 TBC1D9BQ66K14 1250 aa11.21□□□□□ -0.61
NPIPB4-210ENST00000539191 RBM46Q8TBY0 533 aaKnown RBP11.21□□□□□ -0.61
NPIPB4-210ENST00000539191 NARFQ9UHQ1 456 aa11.21□□□□□ -0.61
NPIPB4-210ENST00000539191 TBC1D2BQ9UPU7 963 aa11.21□□□□□ -0.61
NPIPB4-210ENST00000539191 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.62
NPIPB4-210ENST00000539191 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
NPIPB4-210ENST00000539191 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
NPIPB4-210ENST00000539191 NFKBIEO00221 500 aa11.2□□□□□ -0.62
NPIPB4-210ENST00000539191 U2SURPO15042 1029 aaKnown RBP11.2□□□□□ -0.62
NPIPB4-210ENST00000539191 ZNF496Q96IT1 587 aaPredicted RBP11.2□□□□□ -0.62
NPIPB4-210ENST00000539191 TIMELESSQ9UNS1 1208 aa11.2□□□□□ -0.62
NPIPB4-210ENST00000539191 BCORQ6W2J9 1755 aa11.2□□□□□ -0.62
NPIPB4-210ENST00000539191 KDM2BQ8NHM5 1336 aa11.19□□□□□ -0.62
NPIPB4-210ENST00000539191 POTEIP0CG38 1075 aa11.19□□□□□ -0.62
NPIPB4-210ENST00000539191 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
NPIPB4-210ENST00000539191 IL17REQ8NFR9 667 aa11.19□□□□□ -0.62
NPIPB4-210ENST00000539191 KLRG1Q96E93 195 aa11.19□□□□□ -0.62
NPIPB4-210ENST00000539191 C21orf2O43822 256 aa11.18□□□□□ -0.62
NPIPB4-210ENST00000539191 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
NPIPB4-210ENST00000539191 A1BGP04217 495 aa11.18□□□□□ -0.62
NPIPB4-210ENST00000539191 OLFM4Q6UX06 510 aa11.18□□□□□ -0.62
NPIPB4-210ENST00000539191 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
NPIPB4-210ENST00000539191 ZNF622Q969S3 477 aaKnown RBP eCLIP11.18□□□□□ -0.62
NPIPB4-210ENST00000539191 POTECB2RU33 542 aa11.17□□□□□ -0.62
NPIPB4-210ENST00000539191 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
NPIPB4-210ENST00000539191 PHACTR3Q96KR7 559 aa11.17□□□□□ -0.62
NPIPB4-210ENST00000539191 LMNB1P20700 586 aa11.16□□□□□ -0.62
NPIPB4-210ENST00000539191 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
NPIPB4-210ENST00000539191 PRR5LQ6MZQ0 368 aa11.16□□□□□ -0.62
NPIPB4-210ENST00000539191 TTLL6Q8N841 843 aa11.16□□□□□ -0.62
NPIPB4-210ENST00000539191 ARFGEF2Q9Y6D5 1785 aa11.16□□□□□ -0.62
NPIPB4-210ENST00000539191 FAM177BA6PVY3 158 aa11.15□□□□□ -0.62
NPIPB4-210ENST00000539191 H0YIN7 160 aa11.15□□□□□ -0.62
NPIPB4-210ENST00000539191 DCTN1Q14203 1278 aa11.15□□□□□ -0.62
NPIPB4-210ENST00000539191 TTC5Q8N0Z6 440 aa11.15□□□□□ -0.62
NPIPB4-210ENST00000539191 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
NPIPB4-210ENST00000539191 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.63
NPIPB4-210ENST00000539191 CLSPNQ9HAW4 1339 aa11.14□□□□□ -0.63
NPIPB4-210ENST00000539191 GLTPD2A6NH11 291 aa11.14□□□□□ -0.63
NPIPB4-210ENST00000539191 FSTL1Q12841 308 aa11.14□□□□□ -0.63
NPIPB4-210ENST00000539191 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
NPIPB4-210ENST00000539191 SMC1BQ8NDV3 1235 aa11.14□□□□□ -0.63
NPIPB4-210ENST00000539191 DDNO94850 711 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-210ENST00000539191 PRKAR2BP31323 418 aa11.13□□□□□ -0.63
NPIPB4-210ENST00000539191 TEFQ10587 303 aa11.13□□□□□ -0.63
NPIPB4-210ENST00000539191 MCM10Q7L590 875 aa11.13□□□□□ -0.63
NPIPB4-210ENST00000539191 JMYQ8N9B5 988 aa11.13□□□□□ -0.63
NPIPB4-210ENST00000539191 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
NPIPB4-210ENST00000539191 USP16Q9Y5T5 823 aa11.13□□□□□ -0.63
NPIPB4-210ENST00000539191 GNAT3A8MTJ3 354 aa11.12□□□□□ -0.63
NPIPB4-210ENST00000539191 CAMTA2O94983 1202 aa11.12□□□□□ -0.63
NPIPB4-210ENST00000539191 STARD3NLO95772 234 aa11.12□□□□□ -0.63
NPIPB4-210ENST00000539191 HSPA1AP0DMV8 641 aaKnown RBP11.12□□□□□ -0.63
NPIPB4-210ENST00000539191 HSPA1BP0DMV9 641 aaKnown RBP11.12□□□□□ -0.63
NPIPB4-210ENST00000539191 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
NPIPB4-210ENST00000539191 ERFEQ4G0M1 354 aa11.12□□□□□ -0.63
NPIPB4-210ENST00000539191 MIS18AQ9NYP9 233 aa11.12□□□□□ -0.63
NPIPB4-210ENST00000539191 NPHP1O15259 732 aa11.11□□□□□ -0.63
NPIPB4-210ENST00000539191 PRPF40BQ6NWY9 871 aaKnown RBP11.11□□□□□ -0.63
NPIPB4-210ENST00000539191 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms