RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 IL6STP40189 918 aaPredicted RBP16.23■□□□□ 0.19
CLTCL1-205ENST00000538828 EIF5P55010 431 aaKnown RBP16.23■□□□□ 0.19
CLTCL1-205ENST00000538828 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
CLTCL1-205ENST00000538828 NARFQ9UHQ1 456 aa16.23■□□□□ 0.19
CLTCL1-205ENST00000538828 KIF13BQ9NQT8 1826 aa16.22■□□□□ 0.19
CLTCL1-205ENST00000538828 RGL2O15211 777 aa16.22■□□□□ 0.19
CLTCL1-205ENST00000538828 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
CLTCL1-205ENST00000538828 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
CLTCL1-205ENST00000538828 SMIM5Q71RC9 77 aa16.22■□□□□ 0.19
CLTCL1-205ENST00000538828 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
CLTCL1-205ENST00000538828 COL15A1P39059 1388 aa16.22■□□□□ 0.19
CLTCL1-205ENST00000538828 ZPR1O75312 459 aa16.21■□□□□ 0.19
CLTCL1-205ENST00000538828 MMP10P09238 476 aa16.21■□□□□ 0.19
CLTCL1-205ENST00000538828 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.18
CLTCL1-205ENST00000538828 RIPK4P57078 832 aa16.2■□□□□ 0.18
CLTCL1-205ENST00000538828 ADAMTS8Q9UP79 889 aa16.2■□□□□ 0.18
CLTCL1-205ENST00000538828 KCNQ3O43525 872 aa16.19■□□□□ 0.18
CLTCL1-205ENST00000538828 TM4SF1P30408 202 aa16.19■□□□□ 0.18
CLTCL1-205ENST00000538828 TGFB2P61812 414 aa16.19■□□□□ 0.18
CLTCL1-205ENST00000538828 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
CLTCL1-205ENST00000538828 GRIN3BO60391 1043 aa16.18■□□□□ 0.18
CLTCL1-205ENST00000538828 C10orf71Q711Q0 1435 aa16.18■□□□□ 0.18
CLTCL1-205ENST00000538828 CHD4Q14839 1912 aa16.17■□□□□ 0.18
CLTCL1-205ENST00000538828 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
CLTCL1-205ENST00000538828 EIF4A1P60842 406 aaKnown RBP16.17■□□□□ 0.18
CLTCL1-205ENST00000538828 FKBP8Q14318 412 aa16.17■□□□□ 0.18
CLTCL1-205ENST00000538828 NPM2Q86SE8 214 aaKnown RBP16.17■□□□□ 0.18
CLTCL1-205ENST00000538828 NLGN2Q8NFZ4 835 aa16.17■□□□□ 0.18
CLTCL1-205ENST00000538828 USP16Q9Y5T5 823 aa16.17■□□□□ 0.18
CLTCL1-205ENST00000538828 ANP32CO43423 234 aa16.16■□□□□ 0.18
CLTCL1-205ENST00000538828 GIGYF1O75420 1035 aaPredicted RBP16.16■□□□□ 0.18
CLTCL1-205ENST00000538828 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
CLTCL1-205ENST00000538828 USPL1Q5W0Q7 1092 aa16.16■□□□□ 0.18
CLTCL1-205ENST00000538828 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
CLTCL1-205ENST00000538828 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
CLTCL1-205ENST00000538828 ERBB4Q15303 1308 aa16.16■□□□□ 0.18
CLTCL1-205ENST00000538828 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
CLTCL1-205ENST00000538828 A1BGP04217 495 aa16.15■□□□□ 0.18
CLTCL1-205ENST00000538828 GPR162Q16538 588 aa16.15■□□□□ 0.18
CLTCL1-205ENST00000538828 CLEC4GQ6UXB4 293 aa16.15■□□□□ 0.18
CLTCL1-205ENST00000538828 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
CLTCL1-205ENST00000538828 POLRMTO00411 1230 aaKnown RBP16.14■□□□□ 0.17
CLTCL1-205ENST00000538828 BCL2L12Q9HB09 334 aa16.14■□□□□ 0.17
CLTCL1-205ENST00000538828 CHL1O00533 1208 aa16.13■□□□□ 0.17
CLTCL1-205ENST00000538828 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
CLTCL1-205ENST00000538828 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
CLTCL1-205ENST00000538828 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
CLTCL1-205ENST00000538828 CALD1Q05682 793 aaKnown RBP16.12■□□□□ 0.17
CLTCL1-205ENST00000538828 DDR1Q08345 913 aa16.12■□□□□ 0.17
CLTCL1-205ENST00000538828 NFIXQ14938 502 aa16.12■□□□□ 0.17
CLTCL1-205ENST00000538828 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
CLTCL1-205ENST00000538828 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
CLTCL1-205ENST00000538828 MIS18AQ9NYP9 233 aa16.12■□□□□ 0.17
CLTCL1-205ENST00000538828 PDZRN3Q9UPQ7 1066 aa16.12■□□□□ 0.17
CLTCL1-205ENST00000538828 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
CLTCL1-205ENST00000538828 PXDNLA1KZ92 1463 aa16.11■□□□□ 0.17
CLTCL1-205ENST00000538828 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
CLTCL1-205ENST00000538828 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
CLTCL1-205ENST00000538828 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 NBPF26B4DH59 902 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 HOXB7P09629 217 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 YY1P25490 414 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 ZNF652Q9Y2D9 606 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 GOLGB1Q14789 3259 aaKnown RBP16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 UTRNP46939 3433 aa16.1■□□□□ 0.17
CLTCL1-205ENST00000538828 SERPINB2P05120 415 aa16.09■□□□□ 0.17
CLTCL1-205ENST00000538828 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLTCL1-205ENST00000538828 CCDC27Q2M243 656 aa16.09■□□□□ 0.17
CLTCL1-205ENST00000538828 TBC1D2BQ9UPU7 963 aa16.09■□□□□ 0.17
CLTCL1-205ENST00000538828 AFDNP55196 1824 aaKnown RBP16.09■□□□□ 0.17
CLTCL1-205ENST00000538828 CARMIL3Q8ND23 1372 aa16.09■□□□□ 0.17
CLTCL1-205ENST00000538828 BRCA1P38398 1863 aaKnown RBP16.08■□□□□ 0.17
CLTCL1-205ENST00000538828 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.16
CLTCL1-205ENST00000538828 APAF1O14727 1248 aa16.08■□□□□ 0.16
CLTCL1-205ENST00000538828 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.16
CLTCL1-205ENST00000538828 ZNF853P0CG23 659 aa16.07■□□□□ 0.16
CLTCL1-205ENST00000538828 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
CLTCL1-205ENST00000538828 KCNA3P22001 575 aa16.06■□□□□ 0.16
CLTCL1-205ENST00000538828 TBC1D9BQ66K14 1250 aa16.06■□□□□ 0.16
CLTCL1-205ENST00000538828 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
CLTCL1-205ENST00000538828 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
CLTCL1-205ENST00000538828 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
CLTCL1-205ENST00000538828 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
CLTCL1-205ENST00000538828 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
CLTCL1-205ENST00000538828 DPEP1P16444 411 aa16.05■□□□□ 0.16
CLTCL1-205ENST00000538828 GNAI1P63096 354 aa16.05■□□□□ 0.16
CLTCL1-205ENST00000538828 CCDC184Q52MB2 194 aa16.05■□□□□ 0.16
CLTCL1-205ENST00000538828 PIM2Q9P1W9 311 aa16.05■□□□□ 0.16
CLTCL1-205ENST00000538828 ZNF330Q9Y3S2 320 aaPredicted RBP16.05■□□□□ 0.16
CLTCL1-205ENST00000538828 ARFGEF1Q9Y6D6 1849 aa16.05■□□□□ 0.16
CLTCL1-205ENST00000538828 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
CLTCL1-205ENST00000538828 A0A0G2JLW4 131 aa16.04■□□□□ 0.16
CLTCL1-205ENST00000538828 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
CLTCL1-205ENST00000538828 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
CLTCL1-205ENST00000538828 MAP3K15Q6ZN16 1313 aa16.03■□□□□ 0.16
CLTCL1-205ENST00000538828 PDIA6Q15084 440 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms