RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
RAB40B-202ENST00000538809 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
RAB40B-202ENST00000538809 ARFGEF1Q9Y6D6 1849 aa19.96■□□□□ 0.79
RAB40B-202ENST00000538809 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.79
RAB40B-202ENST00000538809 GRIN3BO60391 1043 aa19.95■□□□□ 0.78
RAB40B-202ENST00000538809 DDX10Q13206 875 aaKnown RBP19.95■□□□□ 0.78
RAB40B-202ENST00000538809 MCM10Q7L590 875 aa19.95■□□□□ 0.78
RAB40B-202ENST00000538809 PARP3Q9Y6F1 533 aa19.95■□□□□ 0.78
RAB40B-202ENST00000538809 NRXN2Q9P2S2 1712 aa19.95■□□□□ 0.78
RAB40B-202ENST00000538809 USPL1Q5W0Q7 1092 aa19.94■□□□□ 0.78
RAB40B-202ENST00000538809 KCNQ3O43525 872 aa19.93■□□□□ 0.78
RAB40B-202ENST00000538809 CANXP27824 592 aaKnown RBP19.93■□□□□ 0.78
RAB40B-202ENST00000538809 DDR1Q08345 913 aa19.93■□□□□ 0.78
RAB40B-202ENST00000538809 DCTN1Q14203 1278 aa19.93■□□□□ 0.78
RAB40B-202ENST00000538809 DLEC1Q9Y238 1755 aa19.93■□□□□ 0.78
RAB40B-202ENST00000538809 BTBD11A6QL63 1104 aa19.92■□□□□ 0.78
RAB40B-202ENST00000538809 ZPR1O75312 459 aa19.92■□□□□ 0.78
RAB40B-202ENST00000538809 RTF1Q92541 710 aaKnown RBP19.92■□□□□ 0.78
RAB40B-202ENST00000538809 RALBP1Q15311 655 aa19.91■□□□□ 0.78
RAB40B-202ENST00000538809 FMNL2Q96PY5 1086 aa19.91■□□□□ 0.78
RAB40B-202ENST00000538809 STARD3NLO95772 234 aa19.9■□□□□ 0.78
RAB40B-202ENST00000538809 ANKRD31Q8N7Z5 1873 aa19.9■□□□□ 0.78
RAB40B-202ENST00000538809 A0A0G2JLW4 131 aa19.89■□□□□ 0.77
RAB40B-202ENST00000538809 CACNA1SQ13698 1873 aa19.89■□□□□ 0.77
RAB40B-202ENST00000538809 NARFQ9UHQ1 456 aa19.89■□□□□ 0.77
RAB40B-202ENST00000538809 ZNF330Q9Y3S2 320 aaPredicted RBP19.89■□□□□ 0.77
RAB40B-202ENST00000538809 POLRMTO00411 1230 aaKnown RBP19.88■□□□□ 0.77
RAB40B-202ENST00000538809 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
RAB40B-202ENST00000538809 NEFMP07197 916 aa19.87■□□□□ 0.77
RAB40B-202ENST00000538809 DPEP1P16444 411 aa19.87■□□□□ 0.77
RAB40B-202ENST00000538809 TGFB2P61812 414 aa19.87■□□□□ 0.77
RAB40B-202ENST00000538809 PLEKHF1Q96S99 279 aa19.87■□□□□ 0.77
RAB40B-202ENST00000538809 BCL2L12Q9HB09 334 aa19.87■□□□□ 0.77
RAB40B-202ENST00000538809 PRAMEF22A3QJZ6 481 aa19.86■□□□□ 0.77
RAB40B-202ENST00000538809 TM4SF1P30408 202 aa19.86■□□□□ 0.77
RAB40B-202ENST00000538809 EIF5P55010 431 aaKnown RBP19.86■□□□□ 0.77
RAB40B-202ENST00000538809 TEX13AQ9BXU3 409 aaPredicted RBP19.86■□□□□ 0.77
RAB40B-202ENST00000538809 BCS1LQ9Y276 419 aa19.86■□□□□ 0.77
RAB40B-202ENST00000538809 COL11A2P13942 1736 aaPredicted RBP19.85■□□□□ 0.77
RAB40B-202ENST00000538809 HTATSF1O43719 755 aaKnown RBP19.85■□□□□ 0.77
RAB40B-202ENST00000538809 A1BGP04217 495 aa19.85■□□□□ 0.77
RAB40B-202ENST00000538809 NFIXQ14938 502 aa19.85■□□□□ 0.77
RAB40B-202ENST00000538809 ATP10DQ9P241 1426 aa19.85■□□□□ 0.77
RAB40B-202ENST00000538809 MYBBP1AQ9BQG0 1328 aaKnown RBP19.84■□□□□ 0.77
RAB40B-202ENST00000538809 MAPK8IP3Q9UPT6 1336 aa19.84■□□□□ 0.77
RAB40B-202ENST00000538809 PIP4K2AP48426 406 aaPredicted RBP19.84■□□□□ 0.77
RAB40B-202ENST00000538809 SBF1O95248 1867 aa19.84■□□□□ 0.77
RAB40B-202ENST00000538809 A0A087WZG4 1122 aa19.83■□□□□ 0.77
RAB40B-202ENST00000538809 NFE2L2Q16236 605 aa19.83■□□□□ 0.77
RAB40B-202ENST00000538809 BICDL1Q6ZP65 573 aa19.83■□□□□ 0.77
RAB40B-202ENST00000538809 THUMPD2Q9BTF0 503 aaKnown RBP19.83■□□□□ 0.77
RAB40B-202ENST00000538809 TBC1D2BQ9UPU7 963 aa19.83■□□□□ 0.77
RAB40B-202ENST00000538809 USP16Q9Y5T5 823 aa19.83■□□□□ 0.77
RAB40B-202ENST00000538809 CCDC88AQ3V6T2 1871 aa19.83■□□□□ 0.76
RAB40B-202ENST00000538809 ADCY9O60503 1353 aa19.83■□□□□ 0.76
RAB40B-202ENST00000538809 MIS18AQ9NYP9 233 aa19.82■□□□□ 0.76
RAB40B-202ENST00000538809 CARMIL3Q8ND23 1372 aa19.82■□□□□ 0.76
RAB40B-202ENST00000538809 KCNA3P22001 575 aa19.81■□□□□ 0.76
RAB40B-202ENST00000538809 CHRNA5P30532 468 aa19.81■□□□□ 0.76
RAB40B-202ENST00000538809 IL6STP40189 918 aaPredicted RBP19.81■□□□□ 0.76
RAB40B-202ENST00000538809 TAF7Q15545 349 aaPredicted RBP19.81■□□□□ 0.76
RAB40B-202ENST00000538809 NUP98P52948 1817 aa19.81■□□□□ 0.76
RAB40B-202ENST00000538809 SERPINB2P05120 415 aa19.8■□□□□ 0.76
RAB40B-202ENST00000538809 SNRPA1P09661 255 aaKnown RBP19.8■□□□□ 0.76
RAB40B-202ENST00000538809 TBC1D9BQ66K14 1250 aa19.79■□□□□ 0.76
RAB40B-202ENST00000538809 PNNQ9H307 717 aaKnown RBP19.79■□□□□ 0.76
RAB40B-202ENST00000538809 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
RAB40B-202ENST00000538809 NPM2Q86SE8 214 aaKnown RBP19.78■□□□□ 0.76
RAB40B-202ENST00000538809 PIM2Q9P1W9 311 aa19.78■□□□□ 0.76
RAB40B-202ENST00000538809 CAMTA2O94983 1202 aa19.77■□□□□ 0.76
RAB40B-202ENST00000538809 DZIP3Q86Y13 1208 aaKnown RBP19.77■□□□□ 0.76
RAB40B-202ENST00000538809 ZNF526Q8TF50 670 aaPredicted RBP19.77■□□□□ 0.76
RAB40B-202ENST00000538809 ARFGEF2Q9Y6D5 1785 aa19.77■□□□□ 0.76
RAB40B-202ENST00000538809 ARHGAP27Q6ZUM4 889 aa19.76■□□□□ 0.75
RAB40B-202ENST00000538809 GIGYF1O75420 1035 aaPredicted RBP19.75■□□□□ 0.75
RAB40B-202ENST00000538809 DALRD3Q5D0E6 543 aaKnown RBP19.75■□□□□ 0.75
RAB40B-202ENST00000538809 CCDC146Q8IYE0 955 aa19.75■□□□□ 0.75
RAB40B-202ENST00000538809 NBPF26B4DH59 902 aa19.74■□□□□ 0.75
RAB40B-202ENST00000538809 NBPF10Q6P3W6 841 aaKnown RBP19.74■□□□□ 0.75
RAB40B-202ENST00000538809 CCDC24Q8N4L8 307 aa19.74■□□□□ 0.75
RAB40B-202ENST00000538809 NBPF15Q8N660 670 aa19.74■□□□□ 0.75
RAB40B-202ENST00000538809 PNISRQ8TF01 805 aaKnown RBP19.74■□□□□ 0.75
RAB40B-202ENST00000538809 TIAM2Q8IVF5 1701 aa19.73■□□□□ 0.75
RAB40B-202ENST00000538809 RIPK4P57078 832 aa19.73■□□□□ 0.75
RAB40B-202ENST00000538809 RRP7AQ9Y3A4 280 aaKnown RBP19.73■□□□□ 0.75
RAB40B-202ENST00000538809 TMPOP42166 694 aaKnown RBP19.72■□□□□ 0.75
RAB40B-202ENST00000538809 EIF4A1P60842 406 aaKnown RBP19.72■□□□□ 0.75
RAB40B-202ENST00000538809 WDR43Q15061 677 aaKnown RBP eCLIP19.72■□□□□ 0.75
RAB40B-202ENST00000538809 C2CD5Q86YS7 1000 aa19.72■□□□□ 0.75
RAB40B-202ENST00000538809 FER1L6Q2WGJ9 1857 aa19.71■□□□□ 0.75
RAB40B-202ENST00000538809 C1QTNF8P60827 252 aa19.71■□□□□ 0.75
RAB40B-202ENST00000538809 PRR5LQ6MZQ0 368 aa19.71■□□□□ 0.75
RAB40B-202ENST00000538809 GPBP1L1Q9HC44 474 aaPredicted RBP19.71■□□□□ 0.75
RAB40B-202ENST00000538809 SLX4Q8IY92 1834 aa19.71■□□□□ 0.75
RAB40B-202ENST00000538809 NEUROD2Q15784 382 aa19.7■□□□□ 0.74
RAB40B-202ENST00000538809 SETDB2Q96T68 719 aa19.7■□□□□ 0.74
RAB40B-202ENST00000538809 TSPYL4Q9UJ04 414 aa19.7■□□□□ 0.74
RAB40B-202ENST00000538809 DICER1Q9UPY3 1922 aaKnown RBP19.7■□□□□ 0.74
RAB40B-202ENST00000538809 ANKRD36CQ5JPF3 1778 aa19.7■□□□□ 0.74
RAB40B-202ENST00000538809 TNRC6CQ9HCJ0 1690 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms