RNA–Protein interactions for RNA: ENST00000538345.1

DDX11-211, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 498 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-211ENST00000538345 COL15A1P39059 1388 aa16.21■□□□□ 0.19
DDX11-211ENST00000538345 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
DDX11-211ENST00000538345 BTBD11A6QL63 1104 aa16.2■□□□□ 0.18
DDX11-211ENST00000538345 FKBP8Q14318 412 aa16.2■□□□□ 0.18
DDX11-211ENST00000538345 RTF1Q92541 710 aaKnown RBP16.2■□□□□ 0.18
DDX11-211ENST00000538345 SCN7AQ01118 1682 aa16.2■□□□□ 0.18
DDX11-211ENST00000538345 C10orf71Q711Q0 1435 aa16.19■□□□□ 0.18
DDX11-211ENST00000538345 LAMB4A4D0S4 1761 aa16.19■□□□□ 0.18
DDX11-211ENST00000538345 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
DDX11-211ENST00000538345 PXDNLA1KZ92 1463 aa16.18■□□□□ 0.18
DDX11-211ENST00000538345 HTATSF1O43719 755 aaKnown RBP16.18■□□□□ 0.18
DDX11-211ENST00000538345 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
DDX11-211ENST00000538345 WWC3Q9ULE0 1092 aa16.18■□□□□ 0.18
DDX11-211ENST00000538345 BCORQ6W2J9 1755 aa16.18■□□□□ 0.18
DDX11-211ENST00000538345 NRXN2Q9P2S2 1712 aa16.17■□□□□ 0.18
DDX11-211ENST00000538345 DDR1Q08345 913 aa16.17■□□□□ 0.18
DDX11-211ENST00000538345 NFE2L2Q16236 605 aa16.17■□□□□ 0.18
DDX11-211ENST00000538345 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
DDX11-211ENST00000538345 PRAMEF22A3QJZ6 481 aa16.16■□□□□ 0.18
DDX11-211ENST00000538345 STARD3NLO95772 234 aa16.16■□□□□ 0.18
DDX11-211ENST00000538345 NEFMP07197 916 aa16.16■□□□□ 0.18
DDX11-211ENST00000538345 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
DDX11-211ENST00000538345 THUMPD2Q9BTF0 503 aaKnown RBP16.16■□□□□ 0.18
DDX11-211ENST00000538345 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
DDX11-211ENST00000538345 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
DDX11-211ENST00000538345 ZPR1O75312 459 aa16.15■□□□□ 0.18
DDX11-211ENST00000538345 A1BGP04217 495 aa16.15■□□□□ 0.18
DDX11-211ENST00000538345 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
DDX11-211ENST00000538345 PRKRIP1Q9H875 184 aaPredicted RBP16.15■□□□□ 0.18
DDX11-211ENST00000538345 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
DDX11-211ENST00000538345 MIS18AQ9NYP9 233 aa16.15■□□□□ 0.18
DDX11-211ENST00000538345 PARP3Q9Y6F1 533 aa16.15■□□□□ 0.18
DDX11-211ENST00000538345 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
DDX11-211ENST00000538345 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
DDX11-211ENST00000538345 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
DDX11-211ENST00000538345 TM4SF1P30408 202 aa16.13■□□□□ 0.17
DDX11-211ENST00000538345 PIP4K2AP48426 406 aaPredicted RBP16.13■□□□□ 0.17
DDX11-211ENST00000538345 TAF7Q15545 349 aaPredicted RBP16.13■□□□□ 0.17
DDX11-211ENST00000538345 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
DDX11-211ENST00000538345 NFIXQ14938 502 aa16.12■□□□□ 0.17
DDX11-211ENST00000538345 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
DDX11-211ENST00000538345 PNNQ9H307 717 aaKnown RBP16.12■□□□□ 0.17
DDX11-211ENST00000538345 ZNF330Q9Y3S2 320 aaPredicted RBP16.12■□□□□ 0.17
DDX11-211ENST00000538345 ANKRD31Q8N7Z5 1873 aa16.12■□□□□ 0.17
DDX11-211ENST00000538345 DLEC1Q9Y238 1755 aa16.11■□□□□ 0.17
DDX11-211ENST00000538345 A0A0G2JLW4 131 aa16.11■□□□□ 0.17
DDX11-211ENST00000538345 GRIN3BO60391 1043 aa16.11■□□□□ 0.17
DDX11-211ENST00000538345 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
DDX11-211ENST00000538345 IL6STP40189 918 aaPredicted RBP16.11■□□□□ 0.17
DDX11-211ENST00000538345 DPEP1P16444 411 aa16.1■□□□□ 0.17
DDX11-211ENST00000538345 TGFB2P61812 414 aa16.1■□□□□ 0.17
DDX11-211ENST00000538345 ZNF784Q8NCA9 323 aaPredicted RBP16.1■□□□□ 0.17
DDX11-211ENST00000538345 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
DDX11-211ENST00000538345 A0A087WZG4 1122 aa16.09■□□□□ 0.17
DDX11-211ENST00000538345 TMPOP42166 694 aaKnown RBP16.09■□□□□ 0.17
DDX11-211ENST00000538345 RIPK4P57078 832 aa16.09■□□□□ 0.17
DDX11-211ENST00000538345 RRP7AQ9Y3A4 280 aaKnown RBP16.09■□□□□ 0.17
DDX11-211ENST00000538345 NBPF26B4DH59 902 aa16.08■□□□□ 0.16
DDX11-211ENST00000538345 KCNA3P22001 575 aa16.08■□□□□ 0.16
DDX11-211ENST00000538345 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX11-211ENST00000538345 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.16
DDX11-211ENST00000538345 NBPF15Q8N660 670 aa16.08■□□□□ 0.16
DDX11-211ENST00000538345 CAMTA2O94983 1202 aa16.07■□□□□ 0.16
DDX11-211ENST00000538345 EIF4A1P60842 406 aaKnown RBP16.07■□□□□ 0.16
DDX11-211ENST00000538345 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
DDX11-211ENST00000538345 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
DDX11-211ENST00000538345 PNISRQ8TF01 805 aaKnown RBP16.07■□□□□ 0.16
DDX11-211ENST00000538345 ADAMTS8Q9UP79 889 aa16.07■□□□□ 0.16
DDX11-211ENST00000538345 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
DDX11-211ENST00000538345 COL11A2P13942 1736 aaPredicted RBP16.07■□□□□ 0.16
DDX11-211ENST00000538345 NUP98P52948 1817 aa16.06■□□□□ 0.16
DDX11-211ENST00000538345 SERPINB2P05120 415 aa16.06■□□□□ 0.16
DDX11-211ENST00000538345 CHRNA5P30532 468 aa16.06■□□□□ 0.16
DDX11-211ENST00000538345 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
DDX11-211ENST00000538345 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
DDX11-211ENST00000538345 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
DDX11-211ENST00000538345 RUNDC1Q96C34 613 aa16.05■□□□□ 0.16
DDX11-211ENST00000538345 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
DDX11-211ENST00000538345 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
DDX11-211ENST00000538345 ZNF316A6NFI3 1004 aaPredicted RBP16.04■□□□□ 0.16
DDX11-211ENST00000538345 TSPYL4Q9UJ04 414 aa16.04■□□□□ 0.16
DDX11-211ENST00000538345 ADCY9O60503 1353 aa16.03■□□□□ 0.16
DDX11-211ENST00000538345 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
DDX11-211ENST00000538345 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
DDX11-211ENST00000538345 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
DDX11-211ENST00000538345 SBF1O95248 1867 aa16.03■□□□□ 0.16
DDX11-211ENST00000538345 LMOD3Q0VAK6 560 aa16.02■□□□□ 0.16
DDX11-211ENST00000538345 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
DDX11-211ENST00000538345 PIM2Q9P1W9 311 aa16.01■□□□□ 0.15
DDX11-211ENST00000538345 ATP10DQ9P241 1426 aa16.01■□□□□ 0.15
DDX11-211ENST00000538345 CCDC88AQ3V6T2 1871 aa16■□□□□ 0.15
DDX11-211ENST00000538345 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
DDX11-211ENST00000538345 DALRD3Q5D0E6 543 aaKnown RBP15.99■□□□□ 0.15
DDX11-211ENST00000538345 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
DDX11-211ENST00000538345 SETDB2Q96T68 719 aa15.99■□□□□ 0.15
DDX11-211ENST00000538345 ARFGEF2Q9Y6D5 1785 aa15.99■□□□□ 0.15
DDX11-211ENST00000538345 MYL6BP14649 208 aa15.98■□□□□ 0.15
DDX11-211ENST00000538345 HLFQ16534 295 aa15.98■□□□□ 0.15
DDX11-211ENST00000538345 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
DDX11-211ENST00000538345 ARHGAP27Q6ZUM4 889 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms