RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PROSER3Q2NL68 480 aa17.26■□□□□ 0.35
LIMK1-208ENST00000538333 PPP1R42Q7Z4L9 355 aa17.26■□□□□ 0.35
LIMK1-208ENST00000538333 PLEKHG2Q9H7P9 1386 aa17.25■□□□□ 0.35
LIMK1-208ENST00000538333 PRAMEF22A3QJZ6 481 aa17.25■□□□□ 0.35
LIMK1-208ENST00000538333 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
LIMK1-208ENST00000538333 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
LIMK1-208ENST00000538333 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
LIMK1-208ENST00000538333 C5P01031 1676 aa17.25■□□□□ 0.35
LIMK1-208ENST00000538333 RABEP1Q15276 862 aa17.25■□□□□ 0.35
LIMK1-208ENST00000538333 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
LIMK1-208ENST00000538333 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
LIMK1-208ENST00000538333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIMK1-208ENST00000538333 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
LIMK1-208ENST00000538333 ERC2O15083 957 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 RAB11FIP3O75154 756 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 REC8O95072 547 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 MCM4P33991 863 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 CABLES1Q8TDN4 633 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 AOX1Q06278 1338 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 PHKG2P15735 406 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 STRCQ7RTU9 1775 aa17.23■□□□□ 0.35
LIMK1-208ENST00000538333 MRC1P22897 1456 aa17.22■□□□□ 0.35
LIMK1-208ENST00000538333 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
LIMK1-208ENST00000538333 TATP17735 454 aaPredicted RBP17.22■□□□□ 0.35
LIMK1-208ENST00000538333 KSR2Q6VAB6 950 aa17.22■□□□□ 0.35
LIMK1-208ENST00000538333 SLC52A2Q9HAB3 445 aa17.22■□□□□ 0.35
LIMK1-208ENST00000538333 CPDO75976 1380 aa17.22■□□□□ 0.35
LIMK1-208ENST00000538333 ALDH1L1O75891 902 aa17.22■□□□□ 0.35
LIMK1-208ENST00000538333 MAP3K2Q9Y2U5 619 aa17.22■□□□□ 0.35
LIMK1-208ENST00000538333 MTX1Q13505 466 aa17.21■□□□□ 0.35
LIMK1-208ENST00000538333 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
LIMK1-208ENST00000538333 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
LIMK1-208ENST00000538333 SPG7Q9UQ90 795 aa17.21■□□□□ 0.35
LIMK1-208ENST00000538333 SURF6O75683 361 aaKnown RBP17.21■□□□□ 0.34
LIMK1-208ENST00000538333 PDIA6Q15084 440 aa17.21■□□□□ 0.34
LIMK1-208ENST00000538333 RHPN1Q8TCX5 695 aa17.21■□□□□ 0.34
LIMK1-208ENST00000538333 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.34
LIMK1-208ENST00000538333 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.34
LIMK1-208ENST00000538333 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
LIMK1-208ENST00000538333 AK9Q5TCS8 1911 aa17.2■□□□□ 0.34
LIMK1-208ENST00000538333 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
LIMK1-208ENST00000538333 IFNL2Q8IZJ0 200 aa17.19■□□□□ 0.34
LIMK1-208ENST00000538333 ESYT1Q9BSJ8 1104 aa17.19■□□□□ 0.34
LIMK1-208ENST00000538333 CHMLP26374 656 aa17.18■□□□□ 0.34
LIMK1-208ENST00000538333 RAB3GAP1Q15042 981 aa17.18■□□□□ 0.34
LIMK1-208ENST00000538333 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
LIMK1-208ENST00000538333 KIF1BPQ96EK5 621 aa17.18■□□□□ 0.34
LIMK1-208ENST00000538333 CYP27B1O15528 508 aa17.18■□□□□ 0.34
LIMK1-208ENST00000538333 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
LIMK1-208ENST00000538333 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
LIMK1-208ENST00000538333 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
LIMK1-208ENST00000538333 CWF19L2Q2TBE0 894 aaKnown RBP17.17■□□□□ 0.34
LIMK1-208ENST00000538333 BRINP3Q76B58 766 aa17.17■□□□□ 0.34
LIMK1-208ENST00000538333 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
LIMK1-208ENST00000538333 TNPO1Q92973 898 aaKnown RBP17.17■□□□□ 0.34
LIMK1-208ENST00000538333 UTYO14607 1347 aa17.17■□□□□ 0.34
LIMK1-208ENST00000538333 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
LIMK1-208ENST00000538333 NUTM1Q86Y26 1132 aa17.16■□□□□ 0.34
LIMK1-208ENST00000538333 LINS1Q8NG48 757 aa17.16■□□□□ 0.34
LIMK1-208ENST00000538333 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
LIMK1-208ENST00000538333 HSP90AB4PQ58FF6 505 aa17.16■□□□□ 0.34
LIMK1-208ENST00000538333 RILPL2Q969X0 211 aa17.16■□□□□ 0.34
LIMK1-208ENST00000538333 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
LIMK1-208ENST00000538333 C9orf78Q9NZ63 289 aaPredicted RBP17.16■□□□□ 0.34
LIMK1-208ENST00000538333 GLI3P10071 1580 aa17.15■□□□□ 0.34
LIMK1-208ENST00000538333 DDX58O95786 925 aaKnown RBP17.15■□□□□ 0.34
LIMK1-208ENST00000538333 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
LIMK1-208ENST00000538333 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
LIMK1-208ENST00000538333 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
LIMK1-208ENST00000538333 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
LIMK1-208ENST00000538333 DDX11L8A8MPP1 907 aa17.13■□□□□ 0.33
LIMK1-208ENST00000538333 GRM8O00222 908 aa17.13■□□□□ 0.33
LIMK1-208ENST00000538333 LRP10Q7Z4F1 713 aa17.13■□□□□ 0.33
LIMK1-208ENST00000538333 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
LIMK1-208ENST00000538333 ST18O60284 1047 aa17.13■□□□□ 0.33
LIMK1-208ENST00000538333 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
LIMK1-208ENST00000538333 IL17RAQ96F46 866 aa17.13■□□□□ 0.33
LIMK1-208ENST00000538333 AIMP1Q12904 312 aaKnown RBP17.12■□□□□ 0.33
LIMK1-208ENST00000538333 LAMB4A4D0S4 1761 aa17.12■□□□□ 0.33
LIMK1-208ENST00000538333 SUCLG2Q96I99 432 aa17.12■□□□□ 0.33
LIMK1-208ENST00000538333 IL25Q9H293 177 aa17.12■□□□□ 0.33
LIMK1-208ENST00000538333 ABCA3Q99758 1704 aa17.11■□□□□ 0.33
LIMK1-208ENST00000538333 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
LIMK1-208ENST00000538333 TRAK2O60296 914 aa17.11■□□□□ 0.33
LIMK1-208ENST00000538333 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
LIMK1-208ENST00000538333 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
LIMK1-208ENST00000538333 ANAPC15P60006 121 aa17.11■□□□□ 0.33
LIMK1-208ENST00000538333 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
LIMK1-208ENST00000538333 TTC41PQ6P2S7 1318 aa17.1■□□□□ 0.33
LIMK1-208ENST00000538333 CLEC17AQ6ZS10 378 aa17.1■□□□□ 0.33
LIMK1-208ENST00000538333 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
LIMK1-208ENST00000538333 GBP4Q96PP9 640 aa17.1■□□□□ 0.33
LIMK1-208ENST00000538333 ANO2Q9NQ90 1003 aa17.1■□□□□ 0.33
LIMK1-208ENST00000538333 PALD1Q9ULE6 856 aa17.1■□□□□ 0.33
LIMK1-208ENST00000538333 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
LIMK1-208ENST00000538333 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
LIMK1-208ENST00000538333 MYL6BP14649 208 aa17.09■□□□□ 0.33
LIMK1-208ENST00000538333 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
LIMK1-208ENST00000538333 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms