RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 ARHGEF28Q8N1W1 1705 aaKnown RBP8.36□□□□□ -1.07
DDB1-210ENST00000538129 EIF3AQ14152 1382 aaKnown RBP8.35□□□□□ -1.07
DDB1-210ENST00000538129 CDC42BPGQ6DT37 1551 aa8.35□□□□□ -1.07
DDB1-210ENST00000538129 C1orf167Q5SNV9 1468 aa8.35□□□□□ -1.07
DDB1-210ENST00000538129 S1PR4O95977 384 aa8.35□□□□□ -1.07
DDB1-210ENST00000538129 ESCO1Q5FWF5 840 aa8.35□□□□□ -1.07
DDB1-210ENST00000538129 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
DDB1-210ENST00000538129 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
DDB1-210ENST00000538129 HLA-CQ95604 372 aa8.35□□□□□ -1.07
DDB1-210ENST00000538129 ORAI2Q96SN7 254 aa8.35□□□□□ -1.07
DDB1-210ENST00000538129 HIRIP3Q9BW71 556 aaPredicted RBP8.35□□□□□ -1.07
DDB1-210ENST00000538129 CDK19Q9BWU1 502 aa8.35□□□□□ -1.07
DDB1-210ENST00000538129 ROBO1Q9Y6N7 1651 aa8.34□□□□□ -1.07
DDB1-210ENST00000538129 PLEKHG3A1L390 1219 aa8.34□□□□□ -1.07
DDB1-210ENST00000538129 ZBTB24O43167 697 aaPredicted RBP8.34□□□□□ -1.07
DDB1-210ENST00000538129 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
DDB1-210ENST00000538129 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
DDB1-210ENST00000538129 ADGRB2O60241 1585 aa8.34□□□□□ -1.07
DDB1-210ENST00000538129 JUNDP17535 347 aa8.33□□□□□ -1.08
DDB1-210ENST00000538129 ANKARQ7Z5J8 1434 aa8.33□□□□□ -1.08
DDB1-210ENST00000538129 PRR7Q8TB68 274 aa8.33□□□□□ -1.08
DDB1-210ENST00000538129 NUDT16Q96DE0 195 aaKnown RBP8.33□□□□□ -1.08
DDB1-210ENST00000538129 FMN2Q9NZ56 1722 aa8.33□□□□□ -1.08
DDB1-210ENST00000538129 EVC2Q86UK5 1308 aa8.32□□□□□ -1.08
DDB1-210ENST00000538129 ST20-MTHFSA0A0A6YYL1 179 aa8.32□□□□□ -1.08
DDB1-210ENST00000538129 MMP16P51512 607 aa8.32□□□□□ -1.08
DDB1-210ENST00000538129 FAM160A2Q8N612 972 aaPredicted RBP8.32□□□□□ -1.08
DDB1-210ENST00000538129 LRRC59Q96AG4 307 aaKnown RBP8.32□□□□□ -1.08
DDB1-210ENST00000538129 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
DDB1-210ENST00000538129 PCDHB15Q9Y5E8 787 aa8.32□□□□□ -1.08
DDB1-210ENST00000538129 RGPD8O14715 1765 aaPredicted RBP8.32□□□□□ -1.08
DDB1-210ENST00000538129 SBNO2Q9Y2G9 1366 aa8.32□□□□□ -1.08
DDB1-210ENST00000538129 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
DDB1-210ENST00000538129 FOXO3O43524 673 aa8.31□□□□□ -1.08
DDB1-210ENST00000538129 LILRB3O75022 631 aa8.31□□□□□ -1.08
DDB1-210ENST00000538129 SRPK2P78362 688 aaKnown RBP8.31□□□□□ -1.08
DDB1-210ENST00000538129 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
DDB1-210ENST00000538129 TSC1Q92574 1164 aa8.31□□□□□ -1.08
DDB1-210ENST00000538129 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
DDB1-210ENST00000538129 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
DDB1-210ENST00000538129 QRICH2Q9H0J4 1663 aa8.3□□□□□ -1.08
DDB1-210ENST00000538129 SOS2Q07890 1332 aaPredicted RBP8.3□□□□□ -1.08
DDB1-210ENST00000538129 NPHP3Q7Z494 1330 aa8.3□□□□□ -1.08
DDB1-210ENST00000538129 PRR36Q9H6K5 1346 aa8.3□□□□□ -1.08
DDB1-210ENST00000538129 AHDC1Q5TGY3 1603 aaPredicted RBP8.3□□□□□ -1.08
DDB1-210ENST00000538129 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
DDB1-210ENST00000538129 PSME1Q06323 249 aa8.3□□□□□ -1.08
DDB1-210ENST00000538129 TESK2Q96S53 571 aa8.3□□□□□ -1.08
DDB1-210ENST00000538129 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
DDB1-210ENST00000538129 USP47Q96K76 1375 aa8.3□□□□□ -1.08
DDB1-210ENST00000538129 TULP4Q9NRJ4 1543 aa8.29□□□□□ -1.08
DDB1-210ENST00000538129 PHLPP1O60346 1717 aa8.29□□□□□ -1.08
DDB1-210ENST00000538129 CD2BP2O95400 341 aaKnown RBP8.29□□□□□ -1.08
DDB1-210ENST00000538129 EIF4G2P78344 907 aaKnown RBP eCLIP8.29□□□□□ -1.08
DDB1-210ENST00000538129 KRT28Q7Z3Y7 464 aa8.29□□□□□ -1.08
DDB1-210ENST00000538129 CCDC24Q8N4L8 307 aa8.29□□□□□ -1.08
DDB1-210ENST00000538129 NGDNQ8NEJ9 315 aaKnown RBP8.29□□□□□ -1.08
DDB1-210ENST00000538129 PMFBP1Q8TBY8 1022 aa8.29□□□□□ -1.08
DDB1-210ENST00000538129 DDX17Q92841 729 aaKnown RBP8.29□□□□□ -1.08
DDB1-210ENST00000538129 FCF1Q9Y324 198 aaKnown RBP8.29□□□□□ -1.08
DDB1-210ENST00000538129 NHSL1Q5SYE7 1610 aa8.29□□□□□ -1.08
DDB1-210ENST00000538129 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
DDB1-210ENST00000538129 KIF1AQ12756 1690 aa8.28□□□□□ -1.08
DDB1-210ENST00000538129 JCADQ9P266 1359 aa8.28□□□□□ -1.08
DDB1-210ENST00000538129 TMF1P82094 1093 aa8.28□□□□□ -1.08
DDB1-210ENST00000538129 PTPRNQ16849 979 aa8.28□□□□□ -1.08
DDB1-210ENST00000538129 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
DDB1-210ENST00000538129 CDCA8Q53HL2 280 aa8.28□□□□□ -1.08
DDB1-210ENST00000538129 CABLES1Q8TDN4 633 aa8.28□□□□□ -1.08
DDB1-210ENST00000538129 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
DDB1-210ENST00000538129 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDB1-210ENST00000538129 ITSN1Q15811 1721 aa8.27□□□□□ -1.09
DDB1-210ENST00000538129 SLC19A1P41440 591 aa8.27□□□□□ -1.09
DDB1-210ENST00000538129 RPIAP49247 311 aa8.27□□□□□ -1.09
DDB1-210ENST00000538129 PPP2R2DQ66LE6 453 aa8.27□□□□□ -1.09
DDB1-210ENST00000538129 PRKD2Q9BZL6 878 aa8.27□□□□□ -1.09
DDB1-210ENST00000538129 CABP1Q9NZU7 370 aa8.27□□□□□ -1.09
DDB1-210ENST00000538129 COL16A1Q07092 1604 aaPredicted RBP8.27□□□□□ -1.09
DDB1-210ENST00000538129 ACEP12821 1306 aa8.27□□□□□ -1.09
DDB1-210ENST00000538129 ATP7BP35670 1465 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 ATAD2Q6PL18 1390 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 CCNYL3P0C7X3 344 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 XPCQ01831 940 aaPredicted RBP8.26□□□□□ -1.09
DDB1-210ENST00000538129 QPCTQ16769 361 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 PROCA1Q8NCQ7 364 aaPredicted RBP8.26□□□□□ -1.09
DDB1-210ENST00000538129 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 PRDM9Q9NQV7 894 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 SPATA31A6Q5VVP1 1343 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 SPATA31A3Q5VYP0 1347 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 PXDNQ92626 1479 aa8.26□□□□□ -1.09
DDB1-210ENST00000538129 SBNO1A3KN83 1393 aa8.25□□□□□ -1.09
DDB1-210ENST00000538129 POLR3AO14802 1390 aaPredicted RBP8.25□□□□□ -1.09
DDB1-210ENST00000538129 APBB1O00213 710 aa8.25□□□□□ -1.09
DDB1-210ENST00000538129 PPEF1O14829 653 aaPredicted RBP8.25□□□□□ -1.09
DDB1-210ENST00000538129 HSPA5P11021 654 aaKnown RBP8.25□□□□□ -1.09
DDB1-210ENST00000538129 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
DDB1-210ENST00000538129 PPIP5K1Q6PFW1 1433 aa8.25□□□□□ -1.09
DDB1-210ENST00000538129 BRD4O60885 1362 aaPredicted RBP8.24□□□□□ -1.09
DDB1-210ENST00000538129 CTHP32929 405 aa8.24□□□□□ -1.09
DDB1-210ENST00000538129 ZEB1P37275 1124 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms