RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 DENND4BO75064 1496 aaPredicted RBP3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CCDC18Q5T9S5 1454 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 KDM6BO15054 1643 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CFAP43Q8NDM7 1665 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SOBPA7XYQ1 873 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ATP5J2-PTCD1G3V325 749 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 LGR5O75473 907 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ADD1P35611 737 aaKnown RBP3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ERVK-9P63128 1117 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CTC1Q2NKJ3 1217 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MRPL14Q6P1L8 145 aaKnown RBP3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TRAF7Q6Q0C0 670 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 POGZQ7Z3K3 1410 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CYP2U1Q7Z449 544 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 INSM2Q96T92 566 aaPredicted RBP3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SIGLEC1Q9BZZ2 1709 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ATP13A2Q9NQ11 1180 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SERTAD1Q9UHV2 236 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SERPINA10Q9UK55 444 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 NOD1Q9Y239 953 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 RBM19Q9Y4C8 960 aaKnown RBP3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ADGRL1O94910 1474 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 NCOA2Q15596 1464 aa3.91□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CCNB3Q8WWL7 1395 aa3.9□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CDC42BPBQ9Y5S2 1711 aa3.9□□□□□ -1.78
TNFRSF1A-210ENST00000537842 PTPRKQ15262 1439 aa3.9□□□□□ -1.78
TNFRSF1A-210ENST00000537842 KIAA1107Q9UPP5 1409 aa3.9□□□□□ -1.78
TNFRSF1A-210ENST00000537842 FIGNL2A6NMB9 653 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MAN1A2O60476 641 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 LILRA1O75019 489 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 RASA1P20936 1047 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CEBPAP49715 358 aaPredicted RBP3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MLECQ14165 292 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TRIM46Q7Z4K8 759 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TPCN2Q8NHX9 752 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZFP42Q96MM3 310 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 NLRP3Q96P20 1036 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 OSBPL3Q9H4L5 887 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GMPR2Q9P2T1 348 aaKnown RBP3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MKRN1Q9UHC7 482 aaKnown RBP3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ARHGAP5Q13017 1502 aa3.9□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TIAM1Q13009 1591 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 C11orf95C9JLR9 678 aaPredicted RBP3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 LCE2BO14633 110 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 AVPP01185 164 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CTSOP43234 321 aaPredicted RBP3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GDF10P55107 478 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP4Q13107 963 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TLR1Q15399 786 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MAP7D1Q3KQU3 841 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SLC27A3Q5K4L6 730 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 LARP1Q6PKG0 1096 aaKnown RBP3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PHTF2Q8N3S3 785 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 OGFOD1Q8N543 542 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SIRT1Q96EB6 747 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TSEN34Q9BSV6 310 aaKnown RBP3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 KLF16Q9BXK1 252 aaPredicted RBP3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 KIAA1024Q9UPX6 916 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MAP3K1Q13233 1512 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SPAG9O60271 1321 aaKnown RBP3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SAMD9LQ8IVG5 1584 aa3.89□□□□□ -1.79
TNFRSF1A-210ENST00000537842 MLH3Q9UHC1 1453 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CDC42BPAQ5VT25 1732 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 RICTORQ6R327 1708 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 A0A1W2PRU2 124 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TTLL8A6PVC2 850 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L15C9J2P7 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L10C9JJH3 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L13C9JLJ4 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L12C9JPN9 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L11C9JVI0 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L21D6R901 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L18D6R9N7 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L22D6RA61 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L17D6RBQ6 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L19D6RCP7 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L20D6RJB6 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 HMGB1P09429 215 aaKnown RBP3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 RHOQP17081 205 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 GTF2E1P29083 439 aaPredicted RBP3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PTGIRP43119 386 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ATP1A2P50993 1020 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CLDN10P78369 228 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 USP17L24Q0WX57 530 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CRTC2Q53ET0 693 aaPredicted RBP3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CFAP70Q5T0N1 1121 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 PRICKLE2Q7Z3G6 844 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TRIM50Q86XT4 487 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 NFATC2IPQ8NCF5 419 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 TRIM52Q96A61 297 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 VRTNQ9H8Y1 702 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ETNK1Q9HBU6 452 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 DNAAF2Q9NVR5 837 aaKnown RBP3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 CHIC2Q9UKJ5 165 aa3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ARID4BQ4LE39 1312 aaPredicted RBP3.88□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ABCC5O15440 1437 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ATP10AO60312 1499 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ABCC1P33527 1531 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 ZMYM4Q5VZL5 1548 aa3.87□□□□□ -1.79
TNFRSF1A-210ENST00000537842 SYCP2Q9BX26 1530 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms