RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 SLC39A6Q13433 755 aa11.5□□□□□ -0.57
PTPRR-205ENST00000537619 SPATA31A3Q5VYP0 1347 aa11.5□□□□□ -0.57
PTPRR-205ENST00000537619 NPHP3Q7Z494 1330 aa11.5□□□□□ -0.57
PTPRR-205ENST00000537619 PHKG2P15735 406 aa11.49□□□□□ -0.57
PTPRR-205ENST00000537619 MX1P20591 662 aa11.49□□□□□ -0.57
PTPRR-205ENST00000537619 CADPS2Q86UW7 1296 aa11.49□□□□□ -0.57
PTPRR-205ENST00000537619 STAP2Q9UGK3 403 aa11.49□□□□□ -0.57
PTPRR-205ENST00000537619 PDIA6Q15084 440 aa11.48□□□□□ -0.57
PTPRR-205ENST00000537619 UNC5CLQ8IV45 518 aa11.48□□□□□ -0.57
PTPRR-205ENST00000537619 IL1RAPL2Q9NP60 686 aa11.48□□□□□ -0.57
PTPRR-205ENST00000537619 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
PTPRR-205ENST00000537619 MRC1P22897 1456 aa11.48□□□□□ -0.57
PTPRR-205ENST00000537619 K7ELQ4 463 aaPredicted RBP11.48□□□□□ -0.57
PTPRR-205ENST00000537619 HSP90AB1P08238 724 aaKnown RBP11.48□□□□□ -0.57
PTPRR-205ENST00000537619 RAPGEF4Q8WZA2 1011 aa11.48□□□□□ -0.57
PTPRR-205ENST00000537619 MAP3K2Q9Y2U5 619 aa11.48□□□□□ -0.57
PTPRR-205ENST00000537619 PKD1L3Q7Z443 1732 aa11.48□□□□□ -0.57
PTPRR-205ENST00000537619 GLI3P10071 1580 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 CYP27B1O15528 508 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 EIF5BO60841 1220 aaKnown RBP11.47□□□□□ -0.57
PTPRR-205ENST00000537619 TATP17735 454 aaPredicted RBP11.47□□□□□ -0.57
PTPRR-205ENST00000537619 MCM4P33991 863 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 BRINP3Q76B58 766 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 CPDO75976 1380 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 SRGAP3O43295 1099 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 CWF19L2Q2TBE0 894 aaKnown RBP11.47□□□□□ -0.57
PTPRR-205ENST00000537619 ZNF790Q6PG37 636 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 NUTM1Q86Y26 1132 aa11.47□□□□□ -0.57
PTPRR-205ENST00000537619 ERC2O15083 957 aa11.46□□□□□ -0.58
PTPRR-205ENST00000537619 SURF6O75683 361 aaKnown RBP11.46□□□□□ -0.58
PTPRR-205ENST00000537619 RABEP1Q15276 862 aa11.46□□□□□ -0.58
PTPRR-205ENST00000537619 KSR2Q6VAB6 950 aa11.46□□□□□ -0.58
PTPRR-205ENST00000537619 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.58
PTPRR-205ENST00000537619 IL25Q9H293 177 aa11.46□□□□□ -0.58
PTPRR-205ENST00000537619 STRCQ7RTU9 1775 aa11.46□□□□□ -0.58
PTPRR-205ENST00000537619 AOX1Q06278 1338 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 RAB11FIP3O75154 756 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 CSB-PGBD3P0DP91 1061 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 CHMLP26374 656 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 NFATC2IPQ8NCF5 419 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 PI4K2BQ8TCG2 481 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 ESYT1Q9BSJ8 1104 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPRR-205ENST00000537619 ALDH1L1O75891 902 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 MTX1Q13505 466 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 LRP10Q7Z4F1 713 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 KAZALD1Q96I82 304 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 ZNF496Q96IT1 587 aaPredicted RBP11.45□□□□□ -0.58
PTPRR-205ENST00000537619 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPRR-205ENST00000537619 SPG7Q9UQ90 795 aa11.45□□□□□ -0.58
PTPRR-205ENST00000537619 IGKV5-2P06315 115 aa11.44□□□□□ -0.58
PTPRR-205ENST00000537619 RAB3GAP1Q15042 981 aa11.44□□□□□ -0.58
PTPRR-205ENST00000537619 IFNL2Q8IZJ0 200 aa11.44□□□□□ -0.58
PTPRR-205ENST00000537619 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
PTPRR-205ENST00000537619 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
PTPRR-205ENST00000537619 REC8O95072 547 aa11.43□□□□□ -0.58
PTPRR-205ENST00000537619 AIMP1Q12904 312 aaKnown RBP11.43□□□□□ -0.58
PTPRR-205ENST00000537619 TNPO1Q92973 898 aaKnown RBP11.43□□□□□ -0.58
PTPRR-205ENST00000537619 RILPL2Q969X0 211 aa11.43□□□□□ -0.58
PTPRR-205ENST00000537619 KIF1BPQ96EK5 621 aa11.43□□□□□ -0.58
PTPRR-205ENST00000537619 PA2G4Q9UQ80 394 aaKnown RBP11.43□□□□□ -0.58
PTPRR-205ENST00000537619 UTYO14607 1347 aa11.43□□□□□ -0.58
PTPRR-205ENST00000537619 MAP4K4O95819 1239 aaPredicted RBP11.43□□□□□ -0.58
PTPRR-205ENST00000537619 PALD1Q9ULE6 856 aa11.43□□□□□ -0.58
PTPRR-205ENST00000537619 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.43□□□□□ -0.58
PTPRR-205ENST00000537619 PLEKHG2Q9H7P9 1386 aa11.42□□□□□ -0.58
PTPRR-205ENST00000537619 PARP4Q9UKK3 1724 aaKnown RBP11.42□□□□□ -0.58
PTPRR-205ENST00000537619 ZNF335Q9H4Z2 1342 aaPredicted RBP11.42□□□□□ -0.58
PTPRR-205ENST00000537619 TRIM6-TRIM34B2RNG4 842 aa11.42□□□□□ -0.58
PTPRR-205ENST00000537619 PIP4K2AP48426 406 aaPredicted RBP11.42□□□□□ -0.58
PTPRR-205ENST00000537619 LINS1Q8NG48 757 aa11.42□□□□□ -0.58
PTPRR-205ENST00000537619 XAGE3Q8WTP9 111 aa11.42□□□□□ -0.58
PTPRR-205ENST00000537619 USP16Q9Y5T5 823 aa11.42□□□□□ -0.58
PTPRR-205ENST00000537619 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
PTPRR-205ENST00000537619 USP42Q9H9J4 1324 aaKnown RBP11.41□□□□□ -0.58
PTPRR-205ENST00000537619 KDM4FA0A1W2PPD8 638 aa11.41□□□□□ -0.58
PTPRR-205ENST00000537619 MYL6BP14649 208 aa11.41□□□□□ -0.58
PTPRR-205ENST00000537619 SSFA2P28290 1259 aa11.41□□□□□ -0.58
PTPRR-205ENST00000537619 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
PTPRR-205ENST00000537619 C9orf78Q9NZ63 289 aaPredicted RBP11.41□□□□□ -0.58
PTPRR-205ENST00000537619 ABCA3Q99758 1704 aa11.41□□□□□ -0.58
PTPRR-205ENST00000537619 GRM8O00222 908 aa11.41□□□□□ -0.58
PTPRR-205ENST00000537619 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
PTPRR-205ENST00000537619 COL5A2P05997 1499 aaPredicted RBP11.4□□□□□ -0.58
PTPRR-205ENST00000537619 COPS6Q7L5N1 327 aa11.4□□□□□ -0.58
PTPRR-205ENST00000537619 BRPF3Q9ULD4 1205 aa11.4□□□□□ -0.58
PTPRR-205ENST00000537619 NEURL1BA8MQ27 555 aa11.39□□□□□ -0.59
PTPRR-205ENST00000537619 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
PTPRR-205ENST00000537619 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
PTPRR-205ENST00000537619 SHANK3Q9BYB0 1731 aa11.39□□□□□ -0.59
PTPRR-205ENST00000537619 DDX58O95786 925 aaKnown RBP11.39□□□□□ -0.59
PTPRR-205ENST00000537619 HSP90AA1P07900 732 aaKnown RBP11.39□□□□□ -0.59
PTPRR-205ENST00000537619 SNRPA1P09661 255 aaKnown RBP11.39□□□□□ -0.59
PTPRR-205ENST00000537619 RIC3Q7Z5B4 369 aa11.39□□□□□ -0.59
PTPRR-205ENST00000537619 ZGPATQ8N5A5 531 aaKnown RBP11.39□□□□□ -0.59
PTPRR-205ENST00000537619 IL17RAQ96F46 866 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms