RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ITPK1Q13572 414 aa20.05■□□□□ 0.8
SFSWAP-206ENST00000537582 PDIA6Q15084 440 aa20.05■□□□□ 0.8
SFSWAP-206ENST00000537582 STK31Q9BXU1 1019 aa20.05■□□□□ 0.8
SFSWAP-206ENST00000537582 A1BGP04217 495 aa20.04■□□□□ 0.8
SFSWAP-206ENST00000537582 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
SFSWAP-206ENST00000537582 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-206ENST00000537582 PHAXQ9H814 394 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-206ENST00000537582 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-206ENST00000537582 BRPF1P55201 1214 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-206ENST00000537582 NBPF26B4DH59 902 aa20.03■□□□□ 0.8
SFSWAP-206ENST00000537582 MYL6BP14649 208 aa20.03■□□□□ 0.8
SFSWAP-206ENST00000537582 ATP6V1AP38606 617 aa20.03■□□□□ 0.8
SFSWAP-206ENST00000537582 NBPF14Q5TI25 921 aa20.03■□□□□ 0.8
SFSWAP-206ENST00000537582 NBPF10Q6P3W6 841 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-206ENST00000537582 NBPF15Q8N660 670 aa20.03■□□□□ 0.8
SFSWAP-206ENST00000537582 CLUAP1Q96AJ1 413 aa20.03■□□□□ 0.8
SFSWAP-206ENST00000537582 KIF16BQ96L93 1317 aa20.03■□□□□ 0.8
SFSWAP-206ENST00000537582 RLBP1P12271 317 aa20.02■□□□□ 0.8
SFSWAP-206ENST00000537582 TRIM27P14373 513 aa20.02■□□□□ 0.8
SFSWAP-206ENST00000537582 PANK1Q8TE04 598 aa20.02■□□□□ 0.8
SFSWAP-206ENST00000537582 CYP19A1P11511 503 aaPredicted RBP20.01■□□□□ 0.79
SFSWAP-206ENST00000537582 ZKSCAN2Q63HK3 967 aa20.01■□□□□ 0.79
SFSWAP-206ENST00000537582 DBF4Q9UBU7 674 aaPredicted RBP20.01■□□□□ 0.79
SFSWAP-206ENST00000537582 GTF3C3Q9Y5Q9 886 aa20.01■□□□□ 0.79
SFSWAP-206ENST00000537582 FLIIQ13045 1269 aa20■□□□□ 0.79
SFSWAP-206ENST00000537582 LRP10Q7Z4F1 713 aa20■□□□□ 0.79
SFSWAP-206ENST00000537582 DDX21Q9NR30 783 aaKnown RBP eCLIP20■□□□□ 0.79
SFSWAP-206ENST00000537582 FKBP8Q14318 412 aa20■□□□□ 0.79
SFSWAP-206ENST00000537582 ATF7IPQ6VMQ6 1270 aa20■□□□□ 0.79
SFSWAP-206ENST00000537582 GOLGA6L2Q8N9W4 650 aaPredicted RBP20■□□□□ 0.79
SFSWAP-206ENST00000537582 LY75O60449 1722 aa19.99■□□□□ 0.79
SFSWAP-206ENST00000537582 LINC00116Q8NCU8 138 aa19.99■□□□□ 0.79
SFSWAP-206ENST00000537582 CICQ96RK0 1608 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-206ENST00000537582 TEX13AQ9BXU3 409 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-206ENST00000537582 CCNL1Q9UK58 526 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-206ENST00000537582 TNS1Q9HBL0 1735 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-206ENST00000537582 F6X3S4 739 aa19.97■□□□□ 0.79
SFSWAP-206ENST00000537582 STARD3NLO95772 234 aa19.97■□□□□ 0.79
SFSWAP-206ENST00000537582 AIMP1Q12904 312 aaKnown RBP19.97■□□□□ 0.79
SFSWAP-206ENST00000537582 CRBNQ96SW2 442 aa19.97■□□□□ 0.79
SFSWAP-206ENST00000537582 LRRC4BQ9NT99 713 aa19.97■□□□□ 0.79
SFSWAP-206ENST00000537582 ZBTB1Q9Y2K1 713 aa19.97■□□□□ 0.79
SFSWAP-206ENST00000537582 IPO8O15397 1037 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-206ENST00000537582 APBA3O96018 575 aa19.96■□□□□ 0.79
SFSWAP-206ENST00000537582 NEFLP07196 543 aa19.96■□□□□ 0.79
SFSWAP-206ENST00000537582 FKBP5Q13451 457 aaPredicted RBP19.96■□□□□ 0.79
SFSWAP-206ENST00000537582 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-206ENST00000537582 XAGE3Q8WTP9 111 aa19.96■□□□□ 0.79
SFSWAP-206ENST00000537582 HYPKQ9NX55 129 aa19.96■□□□□ 0.79
SFSWAP-206ENST00000537582 COL5A3P25940 1745 aaPredicted RBP19.96■□□□□ 0.79
SFSWAP-206ENST00000537582 CRKLP46109 303 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 DZIP1LQ8IYY4 767 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 ARHGAP45Q92619 1136 aa19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 ZNF831Q5JPB2 1677 aa19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 PTPRCP08575 1304 aa19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 PROM2Q8N271 834 aa19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 CHMP4AQ9BY43 222 aa19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 COG6Q9Y2V7 657 aa19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 ZNF330Q9Y3S2 320 aaPredicted RBP19.95■□□□□ 0.78
SFSWAP-206ENST00000537582 ERBB4Q15303 1308 aa19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 PDE3AQ14432 1141 aa19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 SMIM5Q71RC9 77 aa19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 COPS6Q7L5N1 327 aa19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 FTSJ3Q8IY81 847 aaKnown RBP19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 TMEM57Q8N5G2 664 aa19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 EXOC6Q8TAG9 804 aa19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 CCDC87Q9NVE4 849 aa19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 ADCY9O60503 1353 aa19.94■□□□□ 0.78
SFSWAP-206ENST00000537582 ABCC4O15439 1325 aa19.93■□□□□ 0.78
SFSWAP-206ENST00000537582 TTLL7Q6ZT98 887 aa19.93■□□□□ 0.78
SFSWAP-206ENST00000537582 API5Q9BZZ5 524 aaKnown RBP19.93■□□□□ 0.78
SFSWAP-206ENST00000537582 RREB1Q92766 1687 aa19.92■□□□□ 0.78
SFSWAP-206ENST00000537582 MYH14Q7Z406 1995 aaKnown RBP19.92■□□□□ 0.78
SFSWAP-206ENST00000537582 PI4KAP2A4QPH2 592 aa19.91■□□□□ 0.78
SFSWAP-206ENST00000537582 TXNRD1Q16881 649 aa19.91■□□□□ 0.78
SFSWAP-206ENST00000537582 PI4KAP1Q8N8J0 262 aa19.91■□□□□ 0.78
SFSWAP-206ENST00000537582 SLC4A10Q6U841 1118 aa19.91■□□□□ 0.78
SFSWAP-206ENST00000537582 CACNA1FO60840 1977 aa19.91■□□□□ 0.78
SFSWAP-206ENST00000537582 AMIGO3Q86WK7 504 aa19.9■□□□□ 0.78
SFSWAP-206ENST00000537582 TAF1LQ8IZX4 1826 aa19.9■□□□□ 0.78
SFSWAP-206ENST00000537582 PLSCR1O15162 318 aa19.89■□□□□ 0.77
SFSWAP-206ENST00000537582 ITPRIPQ8IWB1 547 aa19.89■□□□□ 0.77
SFSWAP-206ENST00000537582 MAP3K2Q9Y2U5 619 aa19.89■□□□□ 0.77
SFSWAP-206ENST00000537582 CNTNAP4Q9C0A0 1308 aa19.89■□□□□ 0.77
SFSWAP-206ENST00000537582 MVPQ14764 893 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-206ENST00000537582 ZBTB3Q9H5J0 574 aa19.88■□□□□ 0.77
SFSWAP-206ENST00000537582 C4BP0C0L5 1744 aa19.88■□□□□ 0.77
SFSWAP-206ENST00000537582 EIF5P55010 431 aaKnown RBP19.87■□□□□ 0.77
SFSWAP-206ENST00000537582 KSR2Q6VAB6 950 aa19.87■□□□□ 0.77
SFSWAP-206ENST00000537582 IL6STP40189 918 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-206ENST00000537582 EN1Q05925 392 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-206ENST00000537582 SLC27A3Q5K4L6 730 aa19.87■□□□□ 0.77
SFSWAP-206ENST00000537582 RIC3Q7Z5B4 369 aa19.87■□□□□ 0.77
SFSWAP-206ENST00000537582 DNAAF4Q8WXU2 420 aa19.87■□□□□ 0.77
SFSWAP-206ENST00000537582 ARXQ96QS3 562 aa19.87■□□□□ 0.77
SFSWAP-206ENST00000537582 GNPATO15228 680 aa19.86■□□□□ 0.77
SFSWAP-206ENST00000537582 MS4A1P11836 297 aa19.86■□□□□ 0.77
SFSWAP-206ENST00000537582 EZH2Q15910 746 aaKnown RBP19.86■□□□□ 0.77
SFSWAP-206ENST00000537582 ANKRD13DQ6ZTN6 518 aa19.86■□□□□ 0.77
SFSWAP-206ENST00000537582 DEFB132Q7Z7B7 95 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms