RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RAB11FIP3O75154 756 aa19.29■□□□□ 0.68
MKS1-204ENST00000537529 MX1P20591 662 aa19.29■□□□□ 0.68
MKS1-204ENST00000537529 IFNL2Q8IZJ0 200 aa19.29■□□□□ 0.68
MKS1-204ENST00000537529 SPRYD3Q8NCJ5 442 aa19.29■□□□□ 0.68
MKS1-204ENST00000537529 ALDH1L1O75891 902 aa19.28■□□□□ 0.68
MKS1-204ENST00000537529 CHRNA2Q15822 529 aa19.28■□□□□ 0.68
MKS1-204ENST00000537529 BRINP3Q76B58 766 aa19.28■□□□□ 0.68
MKS1-204ENST00000537529 HSP90AB1P08238 724 aaKnown RBP19.28■□□□□ 0.68
MKS1-204ENST00000537529 KSR2Q6VAB6 950 aa19.28■□□□□ 0.68
MKS1-204ENST00000537529 PPP1R42Q7Z4L9 355 aa19.28■□□□□ 0.68
MKS1-204ENST00000537529 MRC1P22897 1456 aa19.27■□□□□ 0.68
MKS1-204ENST00000537529 AOX1Q06278 1338 aa19.27■□□□□ 0.68
MKS1-204ENST00000537529 REC8O95072 547 aa19.27■□□□□ 0.68
MKS1-204ENST00000537529 ZNF790Q6PG37 636 aa19.27■□□□□ 0.68
MKS1-204ENST00000537529 HDAC5Q9UQL6 1122 aa19.27■□□□□ 0.68
MKS1-204ENST00000537529 MAP3K2Q9Y2U5 619 aa19.27■□□□□ 0.68
MKS1-204ENST00000537529 DDX58O95786 925 aaKnown RBP19.26■□□□□ 0.67
MKS1-204ENST00000537529 PROSER3Q2NL68 480 aa19.26■□□□□ 0.67
MKS1-204ENST00000537529 USP26Q9BXU7 913 aa19.26■□□□□ 0.67
MKS1-204ENST00000537529 DDX21Q9NR30 783 aaKnown RBP eCLIP19.26■□□□□ 0.67
MKS1-204ENST00000537529 STAP2Q9UGK3 403 aa19.26■□□□□ 0.67
MKS1-204ENST00000537529 PKD1L3Q7Z443 1732 aa19.26■□□□□ 0.67
MKS1-204ENST00000537529 NBPF7P0C2Y1 421 aaPredicted RBP19.26■□□□□ 0.67
MKS1-204ENST00000537529 SRGAP3O43295 1099 aa19.25■□□□□ 0.67
MKS1-204ENST00000537529 RABEP1Q15276 862 aa19.25■□□□□ 0.67
MKS1-204ENST00000537529 DCAF5Q96JK2 942 aa19.25■□□□□ 0.67
MKS1-204ENST00000537529 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
MKS1-204ENST00000537529 ERC2O15083 957 aa19.24■□□□□ 0.67
MKS1-204ENST00000537529 GSE1Q14687 1217 aa19.24■□□□□ 0.67
MKS1-204ENST00000537529 SURF6O75683 361 aaKnown RBP19.24■□□□□ 0.67
MKS1-204ENST00000537529 HSP90AB4PQ58FF6 505 aa19.24■□□□□ 0.67
MKS1-204ENST00000537529 K7ELQ4 463 aaPredicted RBP19.23■□□□□ 0.67
MKS1-204ENST00000537529 STRCQ7RTU9 1775 aa19.23■□□□□ 0.67
MKS1-204ENST00000537529 NFATC2IPQ8NCF5 419 aa19.23■□□□□ 0.67
MKS1-204ENST00000537529 KIF1BPQ96EK5 621 aa19.23■□□□□ 0.67
MKS1-204ENST00000537529 C9orf78Q9NZ63 289 aaPredicted RBP19.23■□□□□ 0.67
MKS1-204ENST00000537529 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
MKS1-204ENST00000537529 MTX1Q13505 466 aa19.22■□□□□ 0.67
MKS1-204ENST00000537529 TUBGCP6Q96RT7 1819 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 TSHZ3Q63HK5 1081 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 LINS1Q8NG48 757 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 RHPN1Q8TCX5 695 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 CIZ1Q9ULV3 898 aaPredicted RBP19.21■□□□□ 0.67
MKS1-204ENST00000537529 C5P01031 1676 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 SOS2Q07890 1332 aaPredicted RBP19.21■□□□□ 0.67
MKS1-204ENST00000537529 CYP27B1O15528 508 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 DDIT3P35638 169 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 PDIA6Q15084 440 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 TTC5Q8N0Z6 440 aa19.21■□□□□ 0.67
MKS1-204ENST00000537529 PARP4Q9UKK3 1724 aaKnown RBP19.21■□□□□ 0.67
MKS1-204ENST00000537529 RBM42Q9BTD8 480 aaKnown RBP19.2■□□□□ 0.66
MKS1-204ENST00000537529 IL1RAPL2Q9NP60 686 aa19.2■□□□□ 0.66
MKS1-204ENST00000537529 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
MKS1-204ENST00000537529 SLAIN2Q9P270 581 aa19.2■□□□□ 0.66
MKS1-204ENST00000537529 HSP90AA1P07900 732 aaKnown RBP19.2■□□□□ 0.66
MKS1-204ENST00000537529 TRIM6-TRIM34B2RNG4 842 aa19.19■□□□□ 0.66
MKS1-204ENST00000537529 CD2BP2O95400 341 aaKnown RBP19.19■□□□□ 0.66
MKS1-204ENST00000537529 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
MKS1-204ENST00000537529 SNRPA1P09661 255 aaKnown RBP19.18■□□□□ 0.66
MKS1-204ENST00000537529 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
MKS1-204ENST00000537529 ZNF335Q9H4Z2 1342 aaPredicted RBP19.18■□□□□ 0.66
MKS1-204ENST00000537529 CABP4P57796 275 aa19.18■□□□□ 0.66
MKS1-204ENST00000537529 AIMP1Q12904 312 aaKnown RBP19.18■□□□□ 0.66
MKS1-204ENST00000537529 CWF19L2Q2TBE0 894 aaKnown RBP19.18■□□□□ 0.66
MKS1-204ENST00000537529 LARP1Q6PKG0 1096 aaKnown RBP19.18■□□□□ 0.66
MKS1-204ENST00000537529 RILPL2Q969X0 211 aa19.18■□□□□ 0.66
MKS1-204ENST00000537529 FMNL2Q96PY5 1086 aa19.18■□□□□ 0.66
MKS1-204ENST00000537529 ESYT1Q9BSJ8 1104 aa19.18■□□□□ 0.66
MKS1-204ENST00000537529 UTYO14607 1347 aa19.17■□□□□ 0.66
MKS1-204ENST00000537529 GRM8O00222 908 aa19.17■□□□□ 0.66
MKS1-204ENST00000537529 RIC3Q7Z5B4 369 aa19.17■□□□□ 0.66
MKS1-204ENST00000537529 NEXNQ0ZGT2 675 aa19.16■□□□□ 0.66
MKS1-204ENST00000537529 OS9Q13438 667 aaPredicted RBP19.16■□□□□ 0.66
MKS1-204ENST00000537529 NUTM1Q86Y26 1132 aa19.16■□□□□ 0.66
MKS1-204ENST00000537529 CHMLP26374 656 aa19.16■□□□□ 0.66
MKS1-204ENST00000537529 MCM4P33991 863 aa19.16■□□□□ 0.66
MKS1-204ENST00000537529 ERC1Q8IUD2 1116 aa19.16■□□□□ 0.66
MKS1-204ENST00000537529 PCDH11XQ9BZA7 1347 aa19.16■□□□□ 0.66
MKS1-204ENST00000537529 PCDH11YQ9BZA8 1340 aa19.16■□□□□ 0.66
MKS1-204ENST00000537529 COL5A2P05997 1499 aaPredicted RBP19.15■□□□□ 0.66
MKS1-204ENST00000537529 KDM4FA0A1W2PPD8 638 aa19.15■□□□□ 0.66
MKS1-204ENST00000537529 TOM1L2Q6ZVM7 507 aa19.15■□□□□ 0.66
MKS1-204ENST00000537529 XAGE3Q8WTP9 111 aa19.15■□□□□ 0.66
MKS1-204ENST00000537529 ST18O60284 1047 aa19.15■□□□□ 0.66
MKS1-204ENST00000537529 MYL6BP14649 208 aa19.15■□□□□ 0.66
MKS1-204ENST00000537529 MCCP23508 829 aa19.15■□□□□ 0.66
MKS1-204ENST00000537529 ABCA3Q99758 1704 aa19.14■□□□□ 0.66
MKS1-204ENST00000537529 USP42Q9H9J4 1324 aaKnown RBP19.14■□□□□ 0.65
MKS1-204ENST00000537529 ZCRB1Q8TBF4 217 aaKnown RBP19.13■□□□□ 0.65
MKS1-204ENST00000537529 PI4K2BQ8TCG2 481 aa19.13■□□□□ 0.65
MKS1-204ENST00000537529 COPS6Q7L5N1 327 aa19.13■□□□□ 0.65
MKS1-204ENST00000537529 SUCLG2Q96I99 432 aa19.13■□□□□ 0.65
MKS1-204ENST00000537529 METTL22Q9BUU2 404 aaPredicted RBP19.13■□□□□ 0.65
MKS1-204ENST00000537529 IGKV5-2P06315 115 aa19.12■□□□□ 0.65
MKS1-204ENST00000537529 TTC41PQ6P2S7 1318 aa19.12■□□□□ 0.65
MKS1-204ENST00000537529 LAMB4A4D0S4 1761 aa19.12■□□□□ 0.65
MKS1-204ENST00000537529 UNC5CLQ8IV45 518 aa19.12■□□□□ 0.65
MKS1-204ENST00000537529 CLASRPQ8N2M8 674 aaKnown RBP19.12■□□□□ 0.65
MKS1-204ENST00000537529 DDX11L8A8MPP1 907 aa19.11■□□□□ 0.65
MKS1-204ENST00000537529 NEURL1BA8MQ27 555 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms