RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 FAM184AQ8NB25 1140 aa4.97□□□□□ -1.61
SEC23A-202ENST00000537403 BBXQ8WY36 941 aaPredicted RBP4.97□□□□□ -1.61
SEC23A-202ENST00000537403 TATP17735 454 aaPredicted RBP4.96□□□□□ -1.61
SEC23A-202ENST00000537403 NEUROD6Q96NK8 337 aa4.96□□□□□ -1.61
SEC23A-202ENST00000537403 ANO2Q9NQ90 1003 aa4.96□□□□□ -1.61
SEC23A-202ENST00000537403 SPATA31A3Q5VYP0 1347 aa4.96□□□□□ -1.61
SEC23A-202ENST00000537403 CHAF1AQ13111 956 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 CSPP1Q1MSJ5 1256 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 TWISTNBQ3B726 338 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 CCDC30Q5VVM6 783 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 PNISRQ8TF01 805 aaKnown RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 PRDM11Q9NQV5 511 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 BMP2KQ9NSY1 1161 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 KIAA1551Q9HCM1 1747 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 MARCH6O60337 910 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 FOXD4L6Q3SYB3 417 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 FOXD4L3Q6VB84 417 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 SYNE3Q6ZMZ3 975 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 TOM1L2Q6ZVM7 507 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 WAPLQ7Z5K2 1190 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 NUDT16Q96DE0 195 aaKnown RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 CD163L1Q9NR16 1453 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 PKD1L3Q7Z443 1732 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 H3BQV1 296 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 GNAI3P08754 354 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 XPCQ01831 940 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 AKAP17AQ02040 695 aaKnown RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 IFFO2Q5TF58 517 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 ZNF530Q6P9A1 599 aaPredicted RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 DDX54Q8TDD1 881 aaKnown RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 TSR2Q969E8 191 aaKnown RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 CHMP4CQ96CF2 233 aa4.96□□□□□ -1.62
SEC23A-202ENST00000537403 NOL10Q9BSC4 688 aaKnown RBP4.96□□□□□ -1.62
SEC23A-202ENST00000537403 FAM177BA6PVY3 158 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 ATN1P54259 1190 aaPredicted RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 ZC3H6P61129 1189 aaKnown RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 RRS1Q15050 365 aaKnown RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 HDGFL1Q5TGJ6 251 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 ATAD2Q6PL18 1390 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 NUTM2BA6NNL0 878 aaPredicted RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 NUTM2EB1AL46 878 aaPredicted RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 ERC2O15083 957 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 SURF6O75683 361 aaKnown RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 AAMPQ13685 434 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 NUTM2AQ8IVF1 878 aaPredicted RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 CLASRPQ8N2M8 674 aaKnown RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 LRRC59Q96AG4 307 aaKnown RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 AFF2P51816 1311 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 TAF1LQ8IZX4 1826 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 CHRM1P11229 460 aaPredicted RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 KIAA2012Q0VF49 1180 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 TRDNQ13061 729 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 ZNF579Q8NAF0 562 aaKnown RBP4.95□□□□□ -1.62
SEC23A-202ENST00000537403 MS4A4AQ96JQ5 239 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 KIF20BQ96Q89 1820 aa4.95□□□□□ -1.62
SEC23A-202ENST00000537403 BLMP54132 1417 aaPredicted RBP4.94□□□□□ -1.62
SEC23A-202ENST00000537403 GABBR2O75899 941 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 VPS53Q5VIR6 699 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 RNF20Q5VTR2 975 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 AMOTL1Q8IY63 956 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 ATP6V1DQ9Y5K8 247 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 KIF13BQ9NQT8 1826 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 CPDO75976 1380 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 CPLX1O14810 134 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 RAD21O60216 631 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 CCDC184Q52MB2 194 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 CREBRFQ8IUR6 639 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 RBM33Q96EV2 1170 aaKnown RBP4.94□□□□□ -1.62
SEC23A-202ENST00000537403 TOGARAM1Q9Y4F4 1720 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 GOLGA6L3A6NEY3 463 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 TPM4P67936 248 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 INTS3Q68E01 1043 aaKnown RBP4.94□□□□□ -1.62
SEC23A-202ENST00000537403 MCTP1Q6DN14 999 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 DDX49Q9Y6V7 483 aaKnown RBP4.94□□□□□ -1.62
SEC23A-202ENST00000537403 USP19O94966 1318 aa4.94□□□□□ -1.62
SEC23A-202ENST00000537403 BCAR3O75815 825 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 CABP4P57796 275 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 FBXW7Q969H0 707 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 FOXO3O43524 673 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 PDE3AQ14432 1141 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 WASHC4Q2M389 1173 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 FCHSD2O94868 740 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 RBM6P78332 1123 aaKnown RBP4.93□□□□□ -1.62
SEC23A-202ENST00000537403 WDR63Q8IWG1 891 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 TRIM34Q9BYJ4 488 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 SPG7Q9UQ90 795 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 SMG6Q86US8 1419 aaKnown RBP4.93□□□□□ -1.62
SEC23A-202ENST00000537403 RGPD2P0DJD1 1756 aa4.93□□□□□ -1.62
SEC23A-202ENST00000537403 MAP2P11137 1827 aaKnown RBP4.92□□□□□ -1.62
SEC23A-202ENST00000537403 AATKQ6ZMQ8 1374 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 PRR36Q9H6K5 1346 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 NOB1Q9ULX3 412 aaKnown RBP4.92□□□□□ -1.62
SEC23A-202ENST00000537403 BTAF1O14981 1849 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 DHX16O60231 1041 aaKnown RBP4.92□□□□□ -1.62
SEC23A-202ENST00000537403 POTEIP0CG38 1075 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 C1orf115Q9H7X2 142 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 COLQQ9Y215 455 aaPredicted RBP4.92□□□□□ -1.62
SEC23A-202ENST00000537403 CPSF1Q10570 1443 aaKnown RBP4.92□□□□□ -1.62
SEC23A-202ENST00000537403 ARHGEF10O15013 1369 aa4.92□□□□□ -1.62
SEC23A-202ENST00000537403 DDX11L8A8MPP1 907 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms