RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 CRKLP46109 303 aaKnown RBP21.3■■□□□ 1
LPCAT3-206ENST00000537179 DPY19L2Q6NUT2 758 aa21.3■■□□□ 1
LPCAT3-206ENST00000537179 TESK2Q96S53 571 aa21.3■■□□□ 1
LPCAT3-206ENST00000537179 PASKQ96RG2 1323 aa21.29■■□□□ 1
LPCAT3-206ENST00000537179 SCN4AP35499 1836 aa21.29■■□□□ 1
LPCAT3-206ENST00000537179 CACNA1SQ13698 1873 aa21.29■■□□□ 1
LPCAT3-206ENST00000537179 ANKRD31Q8N7Z5 1873 aa21.29■■□□□ 1
LPCAT3-206ENST00000537179 HSPA8P11142 646 aaKnown RBP21.29■■□□□ 1
LPCAT3-206ENST00000537179 NEUROD1Q13562 356 aa21.29■■□□□ 1
LPCAT3-206ENST00000537179 EYA1Q99502 592 aa21.29■■□□□ 1
LPCAT3-206ENST00000537179 COL11A2P13942 1736 aaPredicted RBP21.29■■□□□ 1
LPCAT3-206ENST00000537179 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
LPCAT3-206ENST00000537179 RGS19P49795 217 aa21.27■■□□□ 1
LPCAT3-206ENST00000537179 TTLL6Q8N841 843 aa21.27■■□□□ 1
LPCAT3-206ENST00000537179 THSD7BQ9C0I4 1608 aa21.26■□□□□ 0.99
LPCAT3-206ENST00000537179 PDE4DIPQ5VU43 2346 aa21.26■□□□□ 0.99
LPCAT3-206ENST00000537179 CARMIL3Q8ND23 1372 aa21.24■□□□□ 0.99
LPCAT3-206ENST00000537179 ADAMTSL1Q8N6G6 1762 aa21.24■□□□□ 0.99
LPCAT3-206ENST00000537179 CCDC85CA6NKD9 419 aa21.24■□□□□ 0.99
LPCAT3-206ENST00000537179 PPM1GO15355 546 aaPredicted RBP21.23■□□□□ 0.99
LPCAT3-206ENST00000537179 PTCD1O75127 700 aaKnown RBP21.23■□□□□ 0.99
LPCAT3-206ENST00000537179 ERFEQ4G0M1 354 aa21.23■□□□□ 0.99
LPCAT3-206ENST00000537179 USPL1Q5W0Q7 1092 aa21.23■□□□□ 0.99
LPCAT3-206ENST00000537179 TMEM88BA6NKF7 163 aa21.22■□□□□ 0.99
LPCAT3-206ENST00000537179 C2CD5Q86YS7 1000 aa21.22■□□□□ 0.99
LPCAT3-206ENST00000537179 WASHC2AQ641Q2 1341 aa21.22■□□□□ 0.99
LPCAT3-206ENST00000537179 ARFGEF2Q9Y6D5 1785 aa21.21■□□□□ 0.99
LPCAT3-206ENST00000537179 NFIXQ14938 502 aa21.21■□□□□ 0.99
LPCAT3-206ENST00000537179 ST20-MTHFSA0A0A6YYL1 179 aa21.2■□□□□ 0.98
LPCAT3-206ENST00000537179 ZPR1O75312 459 aa21.2■□□□□ 0.98
LPCAT3-206ENST00000537179 DDNO94850 711 aaPredicted RBP21.2■□□□□ 0.98
LPCAT3-206ENST00000537179 INTS5Q6P9B9 1019 aaKnown RBP21.2■□□□□ 0.98
LPCAT3-206ENST00000537179 LDHDQ86WU2 507 aa21.2■□□□□ 0.98
LPCAT3-206ENST00000537179 SCN11AQ9UI33 1791 aa21.2■□□□□ 0.98
LPCAT3-206ENST00000537179 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
LPCAT3-206ENST00000537179 CABP4P57796 275 aa21.19■□□□□ 0.98
LPCAT3-206ENST00000537179 SOS1Q07889 1333 aaPredicted RBP21.18■□□□□ 0.98
LPCAT3-206ENST00000537179 RASSF10A6NK89 507 aa21.17■□□□□ 0.98
LPCAT3-206ENST00000537179 H0YIN7 160 aa21.17■□□□□ 0.98
LPCAT3-206ENST00000537179 ITGBL1O95965 494 aaPredicted RBP21.17■□□□□ 0.98
LPCAT3-206ENST00000537179 SLX4Q8IY92 1834 aa21.17■□□□□ 0.98
LPCAT3-206ENST00000537179 SERPINB2P05120 415 aa21.16■□□□□ 0.98
LPCAT3-206ENST00000537179 ZNF219Q9P2Y4 722 aaPredicted RBP21.16■□□□□ 0.98
LPCAT3-206ENST00000537179 LTBP1Q14766 1721 aa21.15■□□□□ 0.98
LPCAT3-206ENST00000537179 COL15A1P39059 1388 aa21.15■□□□□ 0.98
LPCAT3-206ENST00000537179 LTBP3Q9NS15 1303 aa21.15■□□□□ 0.98
LPCAT3-206ENST00000537179 IQCA1LA6NCM1 817 aa21.15■□□□□ 0.98
LPCAT3-206ENST00000537179 C21orf2O43822 256 aa21.15■□□□□ 0.98
LPCAT3-206ENST00000537179 MAP2K1Q02750 393 aaPredicted RBP21.15■□□□□ 0.98
LPCAT3-206ENST00000537179 TAF1DQ9H5J8 278 aaPredicted RBP21.15■□□□□ 0.98
LPCAT3-206ENST00000537179 WDR33Q9C0J8 1336 aaKnown RBP21.14■□□□□ 0.97
LPCAT3-206ENST00000537179 BCL2L12Q9HB09 334 aa21.14■□□□□ 0.97
LPCAT3-206ENST00000537179 NARFQ9UHQ1 456 aa21.14■□□□□ 0.97
LPCAT3-206ENST00000537179 SCN7AQ01118 1682 aa21.13■□□□□ 0.97
LPCAT3-206ENST00000537179 EIF4A2Q14240 407 aaKnown RBP21.13■□□□□ 0.97
LPCAT3-206ENST00000537179 DEFB115Q30KQ5 88 aa21.13■□□□□ 0.97
LPCAT3-206ENST00000537179 ZNF530Q6P9A1 599 aaPredicted RBP21.13■□□□□ 0.97
LPCAT3-206ENST00000537179 L3MBTL3Q96JM7 780 aaPredicted RBP21.13■□□□□ 0.97
LPCAT3-206ENST00000537179 TAOK3Q9H2K8 898 aa21.13■□□□□ 0.97
LPCAT3-206ENST00000537179 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
LPCAT3-206ENST00000537179 DNAJC10Q8IXB1 793 aa21.11■□□□□ 0.97
LPCAT3-206ENST00000537179 ZNF622Q969S3 477 aaKnown RBP eCLIP21.11■□□□□ 0.97
LPCAT3-206ENST00000537179 EAPPQ56P03 285 aaPredicted RBP21.1■□□□□ 0.97
LPCAT3-206ENST00000537179 NFATC2IPQ8NCF5 419 aa21.1■□□□□ 0.97
LPCAT3-206ENST00000537179 CARD14Q9BXL6 1004 aa21.1■□□□□ 0.97
LPCAT3-206ENST00000537179 CASP8AP2Q9UKL3 1982 aa21.1■□□□□ 0.97
LPCAT3-206ENST00000537179 POLKQ9UBT6 870 aa21.09■□□□□ 0.97
LPCAT3-206ENST00000537179 TRPM7Q96QT4 1865 aa21.09■□□□□ 0.97
LPCAT3-206ENST00000537179 MTHFSP49914 203 aa21.08■□□□□ 0.97
LPCAT3-206ENST00000537179 PLEKHO1Q53GL0 409 aaPredicted RBP21.08■□□□□ 0.97
LPCAT3-206ENST00000537179 CFAP44Q96MT7 982 aa21.08■□□□□ 0.97
LPCAT3-206ENST00000537179 ABT1Q9ULW3 272 aaKnown RBP21.07■□□□□ 0.96
LPCAT3-206ENST00000537179 ZBTB1Q9Y2K1 713 aa21.07■□□□□ 0.96
LPCAT3-206ENST00000537179 CYP19A1P11511 503 aaPredicted RBP21.06■□□□□ 0.96
LPCAT3-206ENST00000537179 CLEC11AQ9Y240 323 aa21.06■□□□□ 0.96
LPCAT3-206ENST00000537179 UBR2Q8IWV8 1755 aa21.05■□□□□ 0.96
LPCAT3-206ENST00000537179 AMOTQ4VCS5 1084 aa21.05■□□□□ 0.96
LPCAT3-206ENST00000537179 MAP1SQ66K74 1059 aaPredicted RBP21.05■□□□□ 0.96
LPCAT3-206ENST00000537179 PDZRN3Q9UPQ7 1066 aa21.05■□□□□ 0.96
LPCAT3-206ENST00000537179 ZNF541Q9H0D2 1346 aa21.04■□□□□ 0.96
LPCAT3-206ENST00000537179 BICDL1Q6ZP65 573 aa21.04■□□□□ 0.96
LPCAT3-206ENST00000537179 CNTROBQ8N137 903 aa21.04■□□□□ 0.96
LPCAT3-206ENST00000537179 HACL1Q9UJ83 578 aa21.04■□□□□ 0.96
LPCAT3-206ENST00000537179 TSKSQ9UJT2 592 aa21.04■□□□□ 0.96
LPCAT3-206ENST00000537179 MRC1P22897 1456 aa21.03■□□□□ 0.96
LPCAT3-206ENST00000537179 EPHX2P34913 555 aa21.03■□□□□ 0.96
LPCAT3-206ENST00000537179 PDE6BP35913 854 aa21.03■□□□□ 0.96
LPCAT3-206ENST00000537179 C1orf141Q5JVX7 400 aa21.03■□□□□ 0.96
LPCAT3-206ENST00000537179 CCDC24Q8N4L8 307 aa21.03■□□□□ 0.96
LPCAT3-206ENST00000537179 BEGAINQ9BUH8 593 aa21.03■□□□□ 0.96
LPCAT3-206ENST00000537179 BRIP1Q9BX63 1249 aa21.03■□□□□ 0.96
LPCAT3-206ENST00000537179 MCOLN1Q9GZU1 580 aa21.03■□□□□ 0.96
LPCAT3-206ENST00000537179 CAPNS2Q96L46 248 aa21.02■□□□□ 0.96
LPCAT3-206ENST00000537179 PRR5LQ6MZQ0 368 aa21.01■□□□□ 0.95
LPCAT3-206ENST00000537179 PRPF40BQ6NWY9 871 aaKnown RBP21.01■□□□□ 0.95
LPCAT3-206ENST00000537179 RNF123Q5XPI4 1314 aa21■□□□□ 0.95
LPCAT3-206ENST00000537179 SOGA3Q5TF21 947 aa20.99■□□□□ 0.95
LPCAT3-206ENST00000537179 TBC1D9BQ66K14 1250 aa20.99■□□□□ 0.95
LPCAT3-206ENST00000537179 PAXIP1Q6ZW49 1069 aaPredicted RBP20.99■□□□□ 0.95
LPCAT3-206ENST00000537179 PNMA8AQ86V59 439 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms