RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 COL3A1P02461 1466 aaPredicted RBP18.56■□□□□ 0.56
COPS7A-206ENST00000537022 TNRC6CQ9HCJ0 1690 aaKnown RBP18.56■□□□□ 0.56
COPS7A-206ENST00000537022 COL15A1P39059 1388 aa18.55■□□□□ 0.56
COPS7A-206ENST00000537022 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
COPS7A-206ENST00000537022 TOMM70O94826 608 aa18.55■□□□□ 0.56
COPS7A-206ENST00000537022 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
COPS7A-206ENST00000537022 SLC39A6Q13433 755 aa18.54■□□□□ 0.56
COPS7A-206ENST00000537022 USPL1Q5W0Q7 1092 aa18.54■□□□□ 0.56
COPS7A-206ENST00000537022 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
COPS7A-206ENST00000537022 C9orf131Q5VYM1 1079 aa18.53■□□□□ 0.56
COPS7A-206ENST00000537022 SCN7AQ01118 1682 aa18.53■□□□□ 0.56
COPS7A-206ENST00000537022 WDR90Q96KV7 1748 aa18.52■□□□□ 0.56
COPS7A-206ENST00000537022 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.56
COPS7A-206ENST00000537022 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.55
COPS7A-206ENST00000537022 CHRNA5P30532 468 aa18.51■□□□□ 0.55
COPS7A-206ENST00000537022 APLP1P51693 650 aa18.51■□□□□ 0.55
COPS7A-206ENST00000537022 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
COPS7A-206ENST00000537022 IFFO2Q5TF58 517 aa18.51■□□□□ 0.55
COPS7A-206ENST00000537022 NMRK2Q9NPI5 230 aa18.51■□□□□ 0.55
COPS7A-206ENST00000537022 NFIXQ14938 502 aa18.5■□□□□ 0.55
COPS7A-206ENST00000537022 ANKRD31Q8N7Z5 1873 aa18.5■□□□□ 0.55
COPS7A-206ENST00000537022 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
COPS7A-206ENST00000537022 BCL2L12Q9HB09 334 aa18.49■□□□□ 0.55
COPS7A-206ENST00000537022 TIAM2Q8IVF5 1701 aa18.49■□□□□ 0.55
COPS7A-206ENST00000537022 KDM2BQ8NHM5 1336 aa18.49■□□□□ 0.55
COPS7A-206ENST00000537022 TTC5Q8N0Z6 440 aa18.48■□□□□ 0.55
COPS7A-206ENST00000537022 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
COPS7A-206ENST00000537022 ZC3H4Q9UPT8 1303 aaKnown RBP18.48■□□□□ 0.55
COPS7A-206ENST00000537022 STARD3NLO95772 234 aa18.47■□□□□ 0.55
COPS7A-206ENST00000537022 GAS2L2Q8NHY3 880 aa18.47■□□□□ 0.55
COPS7A-206ENST00000537022 HEG1Q9ULI3 1381 aa18.46■□□□□ 0.55
COPS7A-206ENST00000537022 BCORQ6W2J9 1755 aa18.46■□□□□ 0.55
COPS7A-206ENST00000537022 A0A087WZG4 1122 aa18.46■□□□□ 0.55
COPS7A-206ENST00000537022 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.55
COPS7A-206ENST00000537022 SERPINB2P05120 415 aa18.46■□□□□ 0.55
COPS7A-206ENST00000537022 EIF5P55010 431 aaKnown RBP18.46■□□□□ 0.55
COPS7A-206ENST00000537022 TEX13AQ9BXU3 409 aaPredicted RBP18.46■□□□□ 0.55
COPS7A-206ENST00000537022 DICER1Q9UPY3 1922 aaKnown RBP18.46■□□□□ 0.55
COPS7A-206ENST00000537022 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
COPS7A-206ENST00000537022 TEFQ10587 303 aa18.45■□□□□ 0.54
COPS7A-206ENST00000537022 ZNF790Q6PG37 636 aa18.45■□□□□ 0.54
COPS7A-206ENST00000537022 C16orf71Q8IYS4 520 aaPredicted RBP18.45■□□□□ 0.54
COPS7A-206ENST00000537022 COL11A2P13942 1736 aaPredicted RBP18.44■□□□□ 0.54
COPS7A-206ENST00000537022 U2SURPO15042 1029 aaKnown RBP18.44■□□□□ 0.54
COPS7A-206ENST00000537022 FSTL1Q12841 308 aa18.44■□□□□ 0.54
COPS7A-206ENST00000537022 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
COPS7A-206ENST00000537022 ZNF496Q96IT1 587 aaPredicted RBP18.44■□□□□ 0.54
COPS7A-206ENST00000537022 FER1L6Q2WGJ9 1857 aa18.43■□□□□ 0.54
COPS7A-206ENST00000537022 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
COPS7A-206ENST00000537022 ARFGEF2Q9Y6D5 1785 aa18.43■□□□□ 0.54
COPS7A-206ENST00000537022 DNAJC5GQ8N7S2 189 aa18.43■□□□□ 0.54
COPS7A-206ENST00000537022 TTLL6Q8N841 843 aa18.43■□□□□ 0.54
COPS7A-206ENST00000537022 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
COPS7A-206ENST00000537022 PDZRN3Q9UPQ7 1066 aa18.42■□□□□ 0.54
COPS7A-206ENST00000537022 CACNA1SQ13698 1873 aa18.41■□□□□ 0.54
COPS7A-206ENST00000537022 H0YIN7 160 aa18.41■□□□□ 0.54
COPS7A-206ENST00000537022 LMNB1P20700 586 aa18.41■□□□□ 0.54
COPS7A-206ENST00000537022 IL6STP40189 918 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-206ENST00000537022 C2CD5Q86YS7 1000 aa18.41■□□□□ 0.54
COPS7A-206ENST00000537022 RASSF7Q02833 373 aa18.4■□□□□ 0.54
COPS7A-206ENST00000537022 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
COPS7A-206ENST00000537022 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
COPS7A-206ENST00000537022 RRAGCQ9HB90 399 aa18.39■□□□□ 0.53
COPS7A-206ENST00000537022 TBC1D9BQ66K14 1250 aa18.38■□□□□ 0.53
COPS7A-206ENST00000537022 BICDL1Q6ZP65 573 aa18.38■□□□□ 0.53
COPS7A-206ENST00000537022 BRIP1Q9BX63 1249 aa18.38■□□□□ 0.53
COPS7A-206ENST00000537022 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
COPS7A-206ENST00000537022 PDE6BP35913 854 aa18.37■□□□□ 0.53
COPS7A-206ENST00000537022 PRELPP51888 382 aa18.37■□□□□ 0.53
COPS7A-206ENST00000537022 GLTPD2A6NH11 291 aa18.36■□□□□ 0.53
COPS7A-206ENST00000537022 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
COPS7A-206ENST00000537022 PRR5LQ6MZQ0 368 aa18.36■□□□□ 0.53
COPS7A-206ENST00000537022 SMC1BQ8NDV3 1235 aa18.36■□□□□ 0.53
COPS7A-206ENST00000537022 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
COPS7A-206ENST00000537022 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
COPS7A-206ENST00000537022 SLX4Q8IY92 1834 aa18.35■□□□□ 0.53
COPS7A-206ENST00000537022 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
COPS7A-206ENST00000537022 BTBD11A6QL63 1104 aa18.35■□□□□ 0.53
COPS7A-206ENST00000537022 NFKBIEO00221 500 aa18.35■□□□□ 0.53
COPS7A-206ENST00000537022 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-206ENST00000537022 NPM2Q86SE8 214 aaKnown RBP18.35■□□□□ 0.53
COPS7A-206ENST00000537022 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
COPS7A-206ENST00000537022 ZNF330Q9Y3S2 320 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-206ENST00000537022 CAMTA2O94983 1202 aa18.34■□□□□ 0.53
COPS7A-206ENST00000537022 A1BGP04217 495 aa18.34■□□□□ 0.53
COPS7A-206ENST00000537022 VEGFAP15692 232 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-206ENST00000537022 KLRG1Q96E93 195 aa18.34■□□□□ 0.53
COPS7A-206ENST00000537022 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.53
COPS7A-206ENST00000537022 SETDB2Q96T68 719 aa18.33■□□□□ 0.52
COPS7A-206ENST00000537022 LTBP3Q9NS15 1303 aa18.32■□□□□ 0.52
COPS7A-206ENST00000537022 KCNQ3O43525 872 aa18.32■□□□□ 0.52
COPS7A-206ENST00000537022 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
COPS7A-206ENST00000537022 CNBD1Q8NA66 436 aa18.32■□□□□ 0.52
COPS7A-206ENST00000537022 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.52
COPS7A-206ENST00000537022 CLEC4GQ6UXB4 293 aa18.31■□□□□ 0.52
COPS7A-206ENST00000537022 DZIP3Q86Y13 1208 aaKnown RBP18.31■□□□□ 0.52
COPS7A-206ENST00000537022 RGL2O15211 777 aa18.3■□□□□ 0.52
COPS7A-206ENST00000537022 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
COPS7A-206ENST00000537022 ST5P78524 1137 aa18.3■□□□□ 0.52
COPS7A-206ENST00000537022 STYK1Q6J9G0 422 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms