RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 HPS1Q92902 700 aa9.1□□□□□ -0.95
PRKDC-208ENST00000536710 IQSEC3Q9UPP2 1182 aaPredicted RBP9.1□□□□□ -0.95
PRKDC-208ENST00000536710 HRH3Q9Y5N1 445 aa9.1□□□□□ -0.95
PRKDC-208ENST00000536710 PARP3Q9Y6F1 533 aa9.1□□□□□ -0.95
PRKDC-208ENST00000536710 MPSTP25325 297 aa9.09□□□□□ -0.95
PRKDC-208ENST00000536710 NOS2P35228 1153 aa9.09□□□□□ -0.95
PRKDC-208ENST00000536710 MEIOBQ8N635 442 aa9.09□□□□□ -0.95
PRKDC-208ENST00000536710 FHDC1Q9C0D6 1143 aaPredicted RBP9.09□□□□□ -0.95
PRKDC-208ENST00000536710 HCN4Q9Y3Q4 1203 aa9.09□□□□□ -0.95
PRKDC-208ENST00000536710 ANKRD33BA6NCL7 494 aa9.08□□□□□ -0.96
PRKDC-208ENST00000536710 UPP2O95045 317 aa9.08□□□□□ -0.96
PRKDC-208ENST00000536710 COX20Q5RI15 118 aa9.08□□□□□ -0.96
PRKDC-208ENST00000536710 SH3PXD2AQ5TCZ1 1133 aa9.08□□□□□ -0.96
PRKDC-208ENST00000536710 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
PRKDC-208ENST00000536710 L3MBTL2Q969R5 705 aa9.08□□□□□ -0.96
PRKDC-208ENST00000536710 NIFKQ9BYG3 293 aaKnown RBP9.08□□□□□ -0.96
PRKDC-208ENST00000536710 DCTN4Q9UJW0 460 aa9.08□□□□□ -0.96
PRKDC-208ENST00000536710 EML1O00423 815 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 CAPN5O15484 640 aaPredicted RBP9.07□□□□□ -0.96
PRKDC-208ENST00000536710 PRR20EP86478 221 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 PRR20CP86479 221 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 PRR20DP86480 221 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 PRR20BP86481 221 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 PRR20AP86496 221 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 ARHGAP4P98171 946 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 TEAD4Q15561 434 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 GNASQ5JWF2 1037 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 PPARGC1BQ86YN6 1023 aaKnown RBP9.07□□□□□ -0.96
PRKDC-208ENST00000536710 ZDHHC1Q8WTX9 485 aa9.07□□□□□ -0.96
PRKDC-208ENST00000536710 INSM2Q96T92 566 aaPredicted RBP9.07□□□□□ -0.96
PRKDC-208ENST00000536710 TSEN34Q9BSV6 310 aaKnown RBP9.07□□□□□ -0.96
PRKDC-208ENST00000536710 QTRT2Q9H974 415 aaKnown RBP9.07□□□□□ -0.96
PRKDC-208ENST00000536710 POLMQ9NP87 494 aaPredicted RBP9.07□□□□□ -0.96
PRKDC-208ENST00000536710 ECM1Q16610 540 aa9.06□□□□□ -0.96
PRKDC-208ENST00000536710 ZSCAN29Q8IWY8 852 aaPredicted RBP9.06□□□□□ -0.96
PRKDC-208ENST00000536710 ALDH16A1Q8IZ83 802 aa9.06□□□□□ -0.96
PRKDC-208ENST00000536710 STIM2Q9P246 746 aa9.06□□□□□ -0.96
PRKDC-208ENST00000536710 E9PSI1 815 aa9.05□□□□□ -0.96
PRKDC-208ENST00000536710 RHBDD1Q8TEB9 315 aa9.05□□□□□ -0.96
PRKDC-208ENST00000536710 BCL2L13Q9BXK5 485 aa9.05□□□□□ -0.96
PRKDC-208ENST00000536710 NDUFB5O43674 189 aa9.04□□□□□ -0.96
PRKDC-208ENST00000536710 PLA2G4AP47712 749 aa9.04□□□□□ -0.96
PRKDC-208ENST00000536710 NOM1Q5C9Z4 860 aaKnown RBP9.04□□□□□ -0.96
PRKDC-208ENST00000536710 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
PRKDC-208ENST00000536710 TMC1Q8TDI8 760 aa9.04□□□□□ -0.96
PRKDC-208ENST00000536710 AIDAQ96BJ3 306 aa9.04□□□□□ -0.96
PRKDC-208ENST00000536710 PHACTR1Q9C0D0 580 aa9.04□□□□□ -0.96
PRKDC-208ENST00000536710 BRPF3Q9ULD4 1205 aa9.04□□□□□ -0.96
PRKDC-208ENST00000536710 LRFN2Q9ULH4 789 aa9.04□□□□□ -0.96
PRKDC-208ENST00000536710 TNFRSF10BO14763 440 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 BMP2P12643 396 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 NPR3P17342 541 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
PRKDC-208ENST00000536710 GPC1P35052 558 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 EIF1AXP47813 144 aaKnown RBP9.03□□□□□ -0.96
PRKDC-208ENST00000536710 HIRAP54198 1017 aaPredicted RBP9.03□□□□□ -0.96
PRKDC-208ENST00000536710 DGKZQ13574 1117 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 C6orf118Q5T5N4 469 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 ALKBH2Q6NS38 261 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 ABTB2Q8N961 1025 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 MYO19Q96H55 970 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 PDZRN3Q9UPQ7 1066 aa9.03□□□□□ -0.96
PRKDC-208ENST00000536710 SPINT1O43278 529 aa9.02□□□□□ -0.97
PRKDC-208ENST00000536710 RTN1Q16799 776 aa9.02□□□□□ -0.97
PRKDC-208ENST00000536710 POTEAQ6S8J7 498 aa9.02□□□□□ -0.97
PRKDC-208ENST00000536710 ASB16Q96NS5 453 aa9.02□□□□□ -0.97
PRKDC-208ENST00000536710 GRIP2Q9C0E4 1043 aa9.02□□□□□ -0.97
PRKDC-208ENST00000536710 KLK14Q9P0G3 267 aa9.02□□□□□ -0.97
PRKDC-208ENST00000536710 RBM47A0AV96 593 aaKnown RBP9.01□□□□□ -0.97
PRKDC-208ENST00000536710 CTSOP43234 321 aaPredicted RBP9.01□□□□□ -0.97
PRKDC-208ENST00000536710 PHKA2P46019 1235 aa9.01□□□□□ -0.97
PRKDC-208ENST00000536710 RNF144AP50876 292 aaPredicted RBP9.01□□□□□ -0.97
PRKDC-208ENST00000536710 C11orf91Q3C1V1 193 aa9.01□□□□□ -0.97
PRKDC-208ENST00000536710 C4orf17Q53FE4 359 aa9.01□□□□□ -0.97
PRKDC-208ENST00000536710 NPAS4Q8IUM7 802 aa9.01□□□□□ -0.97
PRKDC-208ENST00000536710 ZNF295-AS1Q8N0V1 137 aa9.01□□□□□ -0.97
PRKDC-208ENST00000536710 GIPC2Q8TF65 315 aa9.01□□□□□ -0.97
PRKDC-208ENST00000536710 FAM187AA6NFU0 413 aa9□□□□□ -0.97
PRKDC-208ENST00000536710 TXLNAP40222 546 aa9□□□□□ -0.97
PRKDC-208ENST00000536710 NBPF1Q3BBV0 1214 aa9□□□□□ -0.97
PRKDC-208ENST00000536710 CCDC87Q9NVE4 849 aa9□□□□□ -0.97
PRKDC-208ENST00000536710 ZBTB39O15060 712 aa8.99□□□□□ -0.97
PRKDC-208ENST00000536710 PRICKLE2Q7Z3G6 844 aa8.99□□□□□ -0.97
PRKDC-208ENST00000536710 ATCAYQ86WG3 371 aa8.99□□□□□ -0.97
PRKDC-208ENST00000536710 RGL4Q8IZJ4 473 aa8.99□□□□□ -0.97
PRKDC-208ENST00000536710 RHPN1Q8TCX5 695 aa8.99□□□□□ -0.97
PRKDC-208ENST00000536710 IFT43Q96FT9 208 aa8.99□□□□□ -0.97
PRKDC-208ENST00000536710 POU4F2Q12837 409 aa8.98□□□□□ -0.97
PRKDC-208ENST00000536710 ZNF326Q5BKZ1 582 aaKnown RBP8.98□□□□□ -0.97
PRKDC-208ENST00000536710 C1orf53Q5VUE5 145 aa8.98□□□□□ -0.97
PRKDC-208ENST00000536710 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
PRKDC-208ENST00000536710 TMC7Q7Z402 723 aa8.98□□□□□ -0.97
PRKDC-208ENST00000536710 RBCK1Q9BYM8 510 aa8.98□□□□□ -0.97
PRKDC-208ENST00000536710 FZD6O60353 706 aa8.97□□□□□ -0.97
PRKDC-208ENST00000536710 ZNF16P17020 682 aaPredicted RBP8.97□□□□□ -0.97
PRKDC-208ENST00000536710 TATP17735 454 aaPredicted RBP8.97□□□□□ -0.97
PRKDC-208ENST00000536710 DNM1Q05193 864 aaKnown RBP8.97□□□□□ -0.97
PRKDC-208ENST00000536710 FAM26DQ5JW98 314 aa8.97□□□□□ -0.97
PRKDC-208ENST00000536710 ETFBKMTQ8IXQ9 262 aa8.97□□□□□ -0.97
PRKDC-208ENST00000536710 UNCXA6NJT0 531 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms